| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87198591
Identifier: 87198591
GI number: 87198591
Start: 614213
End: 615109
Strand: Reverse
Name: 87198591
Synonym: Saro_0567
Alternate gene names: NA
Gene position: 615109-614213 (Counterclockwise)
Preceding gene: 87198592
Following gene: 87198590
Centisome position: 17.27
GC content: 72.13
Gene sequence:
>897_bases GTGAGATTGCGCGCGCTGCCACTTGCGGCAGTGCTGGCGATGGCCGCAACGCAGCTTGGCGGCTGCGTGGCGGCGGCGGC GCTGGTGCCGCTCGCGGCCGGTGGAACCATGGTCGGCAAGCGCGCTGGCGGAACGAAGGGCACGGCAGGCCAAACGGCGG CAGCGCCCGGCGCGCCGGTGGGCGAGGTGGCCGTTGGCGAGGTGACGGTCGGCAGGGGCGTGGCGGTGCCACCTCCGGAC ATTGCGCCGCCGGTCGAGGATGAACCCGAGCAACCCGGCCCGGTCGATCCGCCAGCGCTTTCGGCTGCCGCCATCCTGCC CCAGGCCGAGGTTCAGGACGATGGCTATGCGGCGATGACCGCGTTCGTGCTGGCGGCAGCGGAAGCGCCCAAGGGCAAGA AGGAGCGGCGTTCGGCGCTGCTCGACCAGAAGAGCCTGGCCGGTGTGCCACGGATGACCGACTGCGCGGGCCAGCGCGGT GCGCTGCTGGTCGATCTGGACCCCGGCGAAAAGCCGTTCGACCTGACCGACCCACCCGCCCCGGCACCGGGCCTTGCCGA CCGCCTGCGCGCCATACGGGGCACGGGGACGGCGGTGGTGTGGATCGCGACCCTTCCCGAGAGCGCATCCAGGGACCTTG CCAACCTGCTTGCCGCGACCGGGCTCGACCCGCTGGGCATCGACGGGATGCTGCTGCTGCGCGGCCGCGAGACGCGCAAG CAGGAACTGCTGAACCGCGCCGGCGAGGACTGGTGCGTTCTGGCCATCGCCGGCGACCGCAAGGCCGACTTCGACGAGGT ATTCGATTATCTGCGCAACCCGGACGGGCCGGTCGCGCTGGCGCTGGAGCAGCACATCGGGGCCGGCTGGTTCCTGGTGC CGCCTCCGATCCGATGA
Upstream 100 bases:
>100_bases ACAGCATCCACCTGCCGGGCGTCTATGTGCAGCGCATGATCGTGGGCGCGCCCTACGACAAGAAGATCGAGTTCCGCACC GTTCGCGAGCGGGAGGCGGC
Downstream 100 bases:
>100_bases ATTCTGACAGGACAGGAAACCGATGAGCACGCAAGACGGACAGAAGGCAGGCTGGAGCCGCGACCAGATGGCGGCGCGCG CCGCGAAGGAACTGCGCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 298; Mature: 298
Protein sequence:
>298_residues MRLRALPLAAVLAMAATQLGGCVAAAALVPLAAGGTMVGKRAGGTKGTAGQTAAAPGAPVGEVAVGEVTVGRGVAVPPPD IAPPVEDEPEQPGPVDPPALSAAAILPQAEVQDDGYAAMTAFVLAAAEAPKGKKERRSALLDQKSLAGVPRMTDCAGQRG ALLVDLDPGEKPFDLTDPPAPAPGLADRLRAIRGTGTAVVWIATLPESASRDLANLLAATGLDPLGIDGMLLLRGRETRK QELLNRAGEDWCVLAIAGDRKADFDEVFDYLRNPDGPVALALEQHIGAGWFLVPPPIR
Sequences:
>Translated_298_residues MRLRALPLAAVLAMAATQLGGCVAAAALVPLAAGGTMVGKRAGGTKGTAGQTAAAPGAPVGEVAVGEVTVGRGVAVPPPD IAPPVEDEPEQPGPVDPPALSAAAILPQAEVQDDGYAAMTAFVLAAAEAPKGKKERRSALLDQKSLAGVPRMTDCAGQRG ALLVDLDPGEKPFDLTDPPAPAPGLADRLRAIRGTGTAVVWIATLPESASRDLANLLAATGLDPLGIDGMLLLRGRETRK QELLNRAGEDWCVLAIAGDRKADFDEVFDYLRNPDGPVALALEQHIGAGWFLVPPPIR >Mature_298_residues MRLRALPLAAVLAMAATQLGGCVAAAALVPLAAGGTMVGKRAGGTKGTAGQTAAAPGAPVGEVAVGEVTVGRGVAVPPPD IAPPVEDEPEQPGPVDPPALSAAAILPQAEVQDDGYAAMTAFVLAAAEAPKGKKERRSALLDQKSLAGVPRMTDCAGQRG ALLVDLDPGEKPFDLTDPPAPAPGLADRLRAIRGTGTAVVWIATLPESASRDLANLLAATGLDPLGIDGMLLLRGRETRK QELLNRAGEDWCVLAIAGDRKADFDEVFDYLRNPDGPVALALEQHIGAGWFLVPPPIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30474; Mature: 30474
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLRALPLAAVLAMAATQLGGCVAAAALVPLAAGGTMVGKRAGGTKGTAGQTAAAPGAPV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCC GEVAVGEVTVGRGVAVPPPDIAPPVEDEPEQPGPVDPPALSAAAILPQAEVQDDGYAAMT CCEEECEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHH AFVLAAAEAPKGKKERRSALLDQKSLAGVPRMTDCAGQRGALLVDLDPGEKPFDLTDPPA HHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHCCCCCEEEEEECCCCCCCCCCCCCC PAPGLADRLRAIRGTGTAVVWIATLPESASRDLANLLAATGLDPLGIDGMLLLRGRETRK CCCCHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHH QELLNRAGEDWCVLAIAGDRKADFDEVFDYLRNPDGPVALALEQHIGAGWFLVPPPIR HHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCEEEEEEHHCCCCEEECCCCCC >Mature Secondary Structure MRLRALPLAAVLAMAATQLGGCVAAAALVPLAAGGTMVGKRAGGTKGTAGQTAAAPGAPV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCC GEVAVGEVTVGRGVAVPPPDIAPPVEDEPEQPGPVDPPALSAAAILPQAEVQDDGYAAMT CCEEECEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHH AFVLAAAEAPKGKKERRSALLDQKSLAGVPRMTDCAGQRGALLVDLDPGEKPFDLTDPPA HHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHCCCCCEEEEEECCCCCCCCCCCCCC PAPGLADRLRAIRGTGTAVVWIATLPESASRDLANLLAATGLDPLGIDGMLLLRGRETRK CCCCHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHH QELLNRAGEDWCVLAIAGDRKADFDEVFDYLRNPDGPVALALEQHIGAGWFLVPPPIR HHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCEEEEEEHHCCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA