Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

Click here to switch to the map view.

The map label for this gene is 87198591

Identifier: 87198591

GI number: 87198591

Start: 614213

End: 615109

Strand: Reverse

Name: 87198591

Synonym: Saro_0567

Alternate gene names: NA

Gene position: 615109-614213 (Counterclockwise)

Preceding gene: 87198592

Following gene: 87198590

Centisome position: 17.27

GC content: 72.13

Gene sequence:

>897_bases
GTGAGATTGCGCGCGCTGCCACTTGCGGCAGTGCTGGCGATGGCCGCAACGCAGCTTGGCGGCTGCGTGGCGGCGGCGGC
GCTGGTGCCGCTCGCGGCCGGTGGAACCATGGTCGGCAAGCGCGCTGGCGGAACGAAGGGCACGGCAGGCCAAACGGCGG
CAGCGCCCGGCGCGCCGGTGGGCGAGGTGGCCGTTGGCGAGGTGACGGTCGGCAGGGGCGTGGCGGTGCCACCTCCGGAC
ATTGCGCCGCCGGTCGAGGATGAACCCGAGCAACCCGGCCCGGTCGATCCGCCAGCGCTTTCGGCTGCCGCCATCCTGCC
CCAGGCCGAGGTTCAGGACGATGGCTATGCGGCGATGACCGCGTTCGTGCTGGCGGCAGCGGAAGCGCCCAAGGGCAAGA
AGGAGCGGCGTTCGGCGCTGCTCGACCAGAAGAGCCTGGCCGGTGTGCCACGGATGACCGACTGCGCGGGCCAGCGCGGT
GCGCTGCTGGTCGATCTGGACCCCGGCGAAAAGCCGTTCGACCTGACCGACCCACCCGCCCCGGCACCGGGCCTTGCCGA
CCGCCTGCGCGCCATACGGGGCACGGGGACGGCGGTGGTGTGGATCGCGACCCTTCCCGAGAGCGCATCCAGGGACCTTG
CCAACCTGCTTGCCGCGACCGGGCTCGACCCGCTGGGCATCGACGGGATGCTGCTGCTGCGCGGCCGCGAGACGCGCAAG
CAGGAACTGCTGAACCGCGCCGGCGAGGACTGGTGCGTTCTGGCCATCGCCGGCGACCGCAAGGCCGACTTCGACGAGGT
ATTCGATTATCTGCGCAACCCGGACGGGCCGGTCGCGCTGGCGCTGGAGCAGCACATCGGGGCCGGCTGGTTCCTGGTGC
CGCCTCCGATCCGATGA

Upstream 100 bases:

>100_bases
ACAGCATCCACCTGCCGGGCGTCTATGTGCAGCGCATGATCGTGGGCGCGCCCTACGACAAGAAGATCGAGTTCCGCACC
GTTCGCGAGCGGGAGGCGGC

Downstream 100 bases:

>100_bases
ATTCTGACAGGACAGGAAACCGATGAGCACGCAAGACGGACAGAAGGCAGGCTGGAGCCGCGACCAGATGGCGGCGCGCG
CCGCGAAGGAACTGCGCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MRLRALPLAAVLAMAATQLGGCVAAAALVPLAAGGTMVGKRAGGTKGTAGQTAAAPGAPVGEVAVGEVTVGRGVAVPPPD
IAPPVEDEPEQPGPVDPPALSAAAILPQAEVQDDGYAAMTAFVLAAAEAPKGKKERRSALLDQKSLAGVPRMTDCAGQRG
ALLVDLDPGEKPFDLTDPPAPAPGLADRLRAIRGTGTAVVWIATLPESASRDLANLLAATGLDPLGIDGMLLLRGRETRK
QELLNRAGEDWCVLAIAGDRKADFDEVFDYLRNPDGPVALALEQHIGAGWFLVPPPIR

Sequences:

>Translated_298_residues
MRLRALPLAAVLAMAATQLGGCVAAAALVPLAAGGTMVGKRAGGTKGTAGQTAAAPGAPVGEVAVGEVTVGRGVAVPPPD
IAPPVEDEPEQPGPVDPPALSAAAILPQAEVQDDGYAAMTAFVLAAAEAPKGKKERRSALLDQKSLAGVPRMTDCAGQRG
ALLVDLDPGEKPFDLTDPPAPAPGLADRLRAIRGTGTAVVWIATLPESASRDLANLLAATGLDPLGIDGMLLLRGRETRK
QELLNRAGEDWCVLAIAGDRKADFDEVFDYLRNPDGPVALALEQHIGAGWFLVPPPIR
>Mature_298_residues
MRLRALPLAAVLAMAATQLGGCVAAAALVPLAAGGTMVGKRAGGTKGTAGQTAAAPGAPVGEVAVGEVTVGRGVAVPPPD
IAPPVEDEPEQPGPVDPPALSAAAILPQAEVQDDGYAAMTAFVLAAAEAPKGKKERRSALLDQKSLAGVPRMTDCAGQRG
ALLVDLDPGEKPFDLTDPPAPAPGLADRLRAIRGTGTAVVWIATLPESASRDLANLLAATGLDPLGIDGMLLLRGRETRK
QELLNRAGEDWCVLAIAGDRKADFDEVFDYLRNPDGPVALALEQHIGAGWFLVPPPIR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30474; Mature: 30474

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLRALPLAAVLAMAATQLGGCVAAAALVPLAAGGTMVGKRAGGTKGTAGQTAAAPGAPV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCC
GEVAVGEVTVGRGVAVPPPDIAPPVEDEPEQPGPVDPPALSAAAILPQAEVQDDGYAAMT
CCEEECEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHH
AFVLAAAEAPKGKKERRSALLDQKSLAGVPRMTDCAGQRGALLVDLDPGEKPFDLTDPPA
HHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHCCCCCEEEEEECCCCCCCCCCCCCC
PAPGLADRLRAIRGTGTAVVWIATLPESASRDLANLLAATGLDPLGIDGMLLLRGRETRK
CCCCHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHH
QELLNRAGEDWCVLAIAGDRKADFDEVFDYLRNPDGPVALALEQHIGAGWFLVPPPIR
HHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCEEEEEEHHCCCCEEECCCCCC
>Mature Secondary Structure
MRLRALPLAAVLAMAATQLGGCVAAAALVPLAAGGTMVGKRAGGTKGTAGQTAAAPGAPV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCC
GEVAVGEVTVGRGVAVPPPDIAPPVEDEPEQPGPVDPPALSAAAILPQAEVQDDGYAAMT
CCEEECEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHH
AFVLAAAEAPKGKKERRSALLDQKSLAGVPRMTDCAGQRGALLVDLDPGEKPFDLTDPPA
HHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHCCCCCEEEEEECCCCCCCCCCCCCC
PAPGLADRLRAIRGTGTAVVWIATLPESASRDLANLLAATGLDPLGIDGMLLLRGRETRK
CCCCHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHH
QELLNRAGEDWCVLAIAGDRKADFDEVFDYLRNPDGPVALALEQHIGAGWFLVPPPIR
HHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCEEEEEEHHCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA