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The map label for this gene is aau3 [H]

Identifier: 87198220

GI number: 87198220

Start: 201349

End: 201789

Strand: Direct

Name: aau3 [H]

Synonym: Saro_0194

Alternate gene names: 87198220

Gene position: 201349-201789 (Clockwise)

Preceding gene: 87198216

Following gene: 87198221

Centisome position: 5.65

GC content: 69.61

Gene sequence:

>441_bases
ATGCGTCTTTCCAGCATGGCCGACTACGCCGTCGTGACGATGTGCGCCGCCGCGCGCCATTGCGGGCAGCAGCGCGTCTC
GGCCCAGCAACTGGCCGACGAAACGGGCCTGCCCGCGCCCACCGTGCAGAAGCTCGTGAGCAAGCTTTCCTCGGCCGGAC
TGCTGAAGTCGGTGCGCGGCGCGCGTGGTGGGCTGAAGCTGGCCCGACCCGCCGCGGCCATCACTTTGGCGGATATCGTC
GAGGCGGTCGAAGGTCCTATTGCGCTTGCGCCGTGCAGCGAGCATGGCCGCCACGATTGCACGCTCGAAAGCGCGTGCAC
CGTCCGTCCGCACTGGCCCGCCGTCGATGCCGCACTTCGCGGCGCGCTGGCGGGCATACCGCTTACCCAATTGTCCCGCC
CCGCCGTCCAGGCGGTACCGGTGGCGGAGGTTCTGGCATGA

Upstream 100 bases:

>100_bases
TTTTTGCGCGTCCAGCGCACTTGTCGCCCGGGTTTCAAGCGCCTAGATAACCGGAGTGATTCGGTCCGATTTCGCGGATC
GTCGCCGGGACCCTTCTGCG

Downstream 100 bases:

>100_bases
CCGATAATACAGAAGTGAAGGATCAGGCTGCGCGCGAGGCTGCCGCTAGGGTTGCCGAGTACGAGCATGGCTGGGTTTCC
GACATCGAGCAGGAATACGG

Product: BadM/Rrf2 family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MRLSSMADYAVVTMCAAARHCGQQRVSAQQLADETGLPAPTVQKLVSKLSSAGLLKSVRGARGGLKLARPAAAITLADIV
EAVEGPIALAPCSEHGRHDCTLESACTVRPHWPAVDAALRGALAGIPLTQLSRPAVQAVPVAEVLA

Sequences:

>Translated_146_residues
MRLSSMADYAVVTMCAAARHCGQQRVSAQQLADETGLPAPTVQKLVSKLSSAGLLKSVRGARGGLKLARPAAAITLADIV
EAVEGPIALAPCSEHGRHDCTLESACTVRPHWPAVDAALRGALAGIPLTQLSRPAVQAVPVAEVLA
>Mature_146_residues
MRLSSMADYAVVTMCAAARHCGQQRVSAQQLADETGLPAPTVQKLVSKLSSAGLLKSVRGARGGLKLARPAAAITLADIV
EAVEGPIALAPCSEHGRHDCTLESACTVRPHWPAVDAALRGALAGIPLTQLSRPAVQAVPVAEVLA

Specific function: Required for growth utilizing PHB cycle intermediates [H]

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790621, Length=109, Percent_Identity=31.1926605504587, Blast_Score=62, Evalue=1e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 15022; Mature: 15022

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLSSMADYAVVTMCAAARHCGQQRVSAQQLADETGLPAPTVQKLVSKLSSAGLLKSVRG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
ARGGLKLARPAAAITLADIVEAVEGPIALAPCSEHGRHDCTLESACTVRPHWPAVDAALR
CCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
GALAGIPLTQLSRPAVQAVPVAEVLA
HHHHCCCHHHHCCCHHHHCCHHHHHC
>Mature Secondary Structure
MRLSSMADYAVVTMCAAARHCGQQRVSAQQLADETGLPAPTVQKLVSKLSSAGLLKSVRG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
ARGGLKLARPAAAITLADIVEAVEGPIALAPCSEHGRHDCTLESACTVRPHWPAVDAALR
CCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
GALAGIPLTQLSRPAVQAVPVAEVLA
HHHHCCCHHHHCCCHHHHCCHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10735852; 11481430 [H]