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The map label for this gene is yfkH [H]

Identifier: 87198076

GI number: 87198076

Start: 52820

End: 53854

Strand: Direct

Name: yfkH [H]

Synonym: Saro_0050

Alternate gene names: 87198076

Gene position: 52820-53854 (Clockwise)

Preceding gene: 87198075

Following gene: 87198077

Centisome position: 1.48

GC content: 65.31

Gene sequence:

>1035_bases
ATGGAGCCCGGCCACCTCCCGCCGGGCGCGCACCCGCTCGTCGAGGTTCCCGACCTTTCGCCCGAAGCGCGACGGCGCGA
AGCGCTGCGCTGGCGCGCTGGGCTGGCCGATGCGCGCGAGAAGCTGGGCCCGGGCAGCAAGGCCTGGGAAGTGGTCAAGC
GGGTCTGGACCGGCGTGTTCAACGATGGTTCCATCCACGCCGGCAACCTTGCCTACATGATCATCATCGCGCTGTTCCCG
TTCTTCATCACCGGAGCGGCACTGTTCTCGTTCTTCGGCGAGGCGAGCCAGCGCGCGGCCGCGATCGATACCGTGCTGAT
CGCGATGCCGCCGGTCGTCGCGGCGACGATCGAGCCTGCAGCGCGCAGCGTGATCGAGGCGCGCACCGGGTGGCTGCTGT
GGGTGGGCGGAATCTTCGGCCTGTGGACCGTGGGCAGCCTGGTCGAGACGATCCGCGACATCCTGCGCCGCGCCTATGGC
ACCCGCTGGGAACATGCGCTGTGGCGCTACCGCCTGATGTCCACCGGCATCACGCTGGCATCGGTCGTGCTGATCCTGCT
GGCGATCTTCGCACAGGTTCTGATCGGCGCCGCCCAGGAAGTGATCGAGGCCTTCCTTCCGCAATTCGGCGATCTGGTCG
CCAGTCTTTCCTTGTCGCGGTTCGTGCCCGCATTCGTACTTTATGCCGCGCTCTGGCTGCTATTCATATCGCTGACCCCG
GGGGCCTATCGCGGCCGCGACTATCCCAAGTGGCCGGGCGCGCTGTTCGTCACGATCTGGTGGATCGCGGTCACCACCGT
CCTGCCGGGCATGTTGCGGACGTTTTTTTCCTACGATCTCACCTATGGCAGCCTCGCCGGGATCATGATCGCCCTTTTCT
TTTTCTGGCTGGTCGGCTTAGGGATGGTTGTGGGGGCCGAACTCAATGCCGCGCTGACGGAAACACCGGAAGAACGCGAC
ATGCTGGGCCAGGCAGACGATCGCGCCCGCGCGATCCGGAACAACGAAACAAGAAGCGAGAACGAGAACGCATGA

Upstream 100 bases:

>100_bases
CCTGCAGATCGACATTCCCGCCGACGACGCGGATCTGAAAGCGCGTCTCGAGGGTTGGCAGGACATGCGGAACCTGCGCG
ACAAACTCGGAGCCTGACGA

Downstream 100 bases:

>100_bases
CCGGACTGATGCAAGGGAAGCGTGGCCTGATCATGGGCCTTGCCAACGACAAGTCGTTGGCCTGGGGGATCGCGAAGAAG
CTGCACGAGCAGGGCGCGGA

Product: ribonuclease BN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 344; Mature: 344

Protein sequence:

>344_residues
MEPGHLPPGAHPLVEVPDLSPEARRREALRWRAGLADAREKLGPGSKAWEVVKRVWTGVFNDGSIHAGNLAYMIIIALFP
FFITGAALFSFFGEASQRAAAIDTVLIAMPPVVAATIEPAARSVIEARTGWLLWVGGIFGLWTVGSLVETIRDILRRAYG
TRWEHALWRYRLMSTGITLASVVLILLAIFAQVLIGAAQEVIEAFLPQFGDLVASLSLSRFVPAFVLYAALWLLFISLTP
GAYRGRDYPKWPGALFVTIWWIAVTTVLPGMLRTFFSYDLTYGSLAGIMIALFFFWLVGLGMVVGAELNAALTETPEERD
MLGQADDRARAIRNNETRSENENA

Sequences:

>Translated_344_residues
MEPGHLPPGAHPLVEVPDLSPEARRREALRWRAGLADAREKLGPGSKAWEVVKRVWTGVFNDGSIHAGNLAYMIIIALFP
FFITGAALFSFFGEASQRAAAIDTVLIAMPPVVAATIEPAARSVIEARTGWLLWVGGIFGLWTVGSLVETIRDILRRAYG
TRWEHALWRYRLMSTGITLASVVLILLAIFAQVLIGAAQEVIEAFLPQFGDLVASLSLSRFVPAFVLYAALWLLFISLTP
GAYRGRDYPKWPGALFVTIWWIAVTTVLPGMLRTFFSYDLTYGSLAGIMIALFFFWLVGLGMVVGAELNAALTETPEERD
MLGQADDRARAIRNNETRSENENA
>Mature_344_residues
MEPGHLPPGAHPLVEVPDLSPEARRREALRWRAGLADAREKLGPGSKAWEVVKRVWTGVFNDGSIHAGNLAYMIIIALFP
FFITGAALFSFFGEASQRAAAIDTVLIAMPPVVAATIEPAARSVIEARTGWLLWVGGIFGLWTVGSLVETIRDILRRAYG
TRWEHALWRYRLMSTGITLASVVLILLAIFAQVLIGAAQEVIEAFLPQFGDLVASLSLSRFVPAFVLYAALWLLFISLTP
GAYRGRDYPKWPGALFVTIWWIAVTTVLPGMLRTFFSYDLTYGSLAGIMIALFFFWLVGLGMVVGAELNAALTETPEERD
MLGQADDRARAIRNNETRSENENA

Specific function: Unknown

COG id: COG1295

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017039
- InterPro:   IPR004664 [H]

Pfam domain/function: PF03631 Ribonuclease_BN [H]

EC number: NA

Molecular weight: Translated: 37911; Mature: 37911

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPGHLPPGAHPLVEVPDLSPEARRREALRWRAGLADAREKLGPGSKAWEVVKRVWTGVF
CCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC
NDGSIHAGNLAYMIIIALFPFFITGAALFSFFGEASQRAAAIDTVLIAMPPVVAATIEPA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHH
ARSVIEARTGWLLWVGGIFGLWTVGSLVETIRDILRRAYGTRWEHALWRYRLMSTGITLA
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHH
SVVLILLAIFAQVLIGAAQEVIEAFLPQFGDLVASLSLSRFVPAFVLYAALWLLFISLTP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GAYRGRDYPKWPGALFVTIWWIAVTTVLPGMLRTFFSYDLTYGSLAGIMIALFFFWLVGL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
GMVVGAELNAALTETPEERDMLGQADDRARAIRNNETRSENENA
HHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MEPGHLPPGAHPLVEVPDLSPEARRREALRWRAGLADAREKLGPGSKAWEVVKRVWTGVF
CCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC
NDGSIHAGNLAYMIIIALFPFFITGAALFSFFGEASQRAAAIDTVLIAMPPVVAATIEPA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHH
ARSVIEARTGWLLWVGGIFGLWTVGSLVETIRDILRRAYGTRWEHALWRYRLMSTGITLA
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHH
SVVLILLAIFAQVLIGAAQEVIEAFLPQFGDLVASLSLSRFVPAFVLYAALWLLFISLTP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GAYRGRDYPKWPGALFVTIWWIAVTTVLPGMLRTFFSYDLTYGSLAGIMIALFFFWLVGL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
GMVVGAELNAALTETPEERDMLGQADDRARAIRNNETRSENENA
HHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969503; 9384377 [H]