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The map label for this gene is exoF [H]

Identifier: 86751806

GI number: 86751806

Start: 5328176

End: 5328835

Strand: Reverse

Name: exoF [H]

Synonym: RPB_4708

Alternate gene names: 86751806

Gene position: 5328835-5328176 (Counterclockwise)

Preceding gene: 86751807

Following gene: 86751804

Centisome position: 99.95

GC content: 69.09

Gene sequence:

>660_bases
ATGGCTCCAGTGCGTTTGGACCACGCGTTTCGATTGTCGATGATTGCCGTAACGGCAGCGCTCGCGCTCGGCGGCTGCAT
GCGGCGGTCGGGGCCGGTCGCGATCCAGCCGTCCAACACCCTCGACAGCATGGCCTATGGTGGCGGCCCTGCCGGACCGG
GTCCGGCTGCCTATGCGTCCGCGCCGATGCCCGGCCCCCGAACGGAATATCGTCTCGATGCCGGCGACCGGCTGCGGATC
GTGGTCTACGGCCAGGAAGGTCTCACCAACAGCTACGCGATCGATGCCTCCGGCGCGATCACCATGCCGCTGATCGGCAG
CGTGCCGGCGCGCGGCCGCACGCCGGCCGAACTCGCCGCCGCGATCTCCGCGCGGCTGCGCAACGGCTTCATTCGTGAGC
CGTCGGTGGCGGTCGAAGTCGAATCCTATCGGCCGTTCTATATTCTCGGCGAAGTGCTGGCGCCCGGCCAATATCCCTAT
GTGCCGAACATGACGGTCGAAAGCGCGATCGCGATCGCCGGCGGTTTCTCGCCGCGCGCCCGCCGCGACAGCGCGACGCT
GACGCATCCCGAGGGCGGCGCGATGGTGCGTGCCGTCGTCCCGCTCGGCACGCCGCTCAGCCCCGGCGACACCGTGATGG
TCAGCGAACGCTGGTTCTGA

Upstream 100 bases:

>100_bases
GCTGCGCGAGGCCCTGCCGCTGCGCCCTCGCGGAACTACGCACCGCGAACAATTTGTTAACCCTAACAGGGCATAAACGG
AGCCGTCTCGTGGAGAGGGA

Downstream 100 bases:

>100_bases
AACTCACCCCGGCCTCGACCGTGATCGTGCGGCCTACGGCCACATCCAGTTGCGGCCCCAGTCGCCCTTCCAGCCGGTCA
GCCGGCCGCGGCGGAATTGC

Product: polysaccharide export protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 218

Protein sequence:

>219_residues
MAPVRLDHAFRLSMIAVTAALALGGCMRRSGPVAIQPSNTLDSMAYGGGPAGPGPAAYASAPMPGPRTEYRLDAGDRLRI
VVYGQEGLTNSYAIDASGAITMPLIGSVPARGRTPAELAAAISARLRNGFIREPSVAVEVESYRPFYILGEVLAPGQYPY
VPNMTVESAIAIAGGFSPRARRDSATLTHPEGGAMVRAVVPLGTPLSPGDTVMVSERWF

Sequences:

>Translated_219_residues
MAPVRLDHAFRLSMIAVTAALALGGCMRRSGPVAIQPSNTLDSMAYGGGPAGPGPAAYASAPMPGPRTEYRLDAGDRLRI
VVYGQEGLTNSYAIDASGAITMPLIGSVPARGRTPAELAAAISARLRNGFIREPSVAVEVESYRPFYILGEVLAPGQYPY
VPNMTVESAIAIAGGFSPRARRDSATLTHPEGGAMVRAVVPLGTPLSPGDTVMVSERWF
>Mature_218_residues
APVRLDHAFRLSMIAVTAALALGGCMRRSGPVAIQPSNTLDSMAYGGGPAGPGPAAYASAPMPGPRTEYRLDAGDRLRIV
VYGQEGLTNSYAIDASGAITMPLIGSVPARGRTPAELAAAISARLRNGFIREPSVAVEVESYRPFYILGEVLAPGQYPYV
PNMTVESAIAIAGGFSPRARRDSATLTHPEGGAMVRAVVPLGTPLSPGDTVMVSERWF

Specific function: Involved in succinoglycan (EPS I) synthesis. Needed for the addition of the first sugar (galactose) to the isoprenoid carrier [H]

COG id: COG1596

COG function: function code M; Periplasmic protein involved in polysaccharide export

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003715
- InterPro:   IPR019554 [H]

Pfam domain/function: PF02563 Poly_export; PF10531 SLBB [H]

EC number: NA

Molecular weight: Translated: 22899; Mature: 22767

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPVRLDHAFRLSMIAVTAALALGGCMRRSGPVAIQPSNTLDSMAYGGGPAGPGPAAYAS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHCCCCCCCCCCCCCCC
APMPGPRTEYRLDAGDRLRIVVYGQEGLTNSYAIDASGAITMPLIGSVPARGRTPAELAA
CCCCCCCCEEEECCCCEEEEEEECCCCCCCCEEECCCCCEEECEECCCCCCCCCHHHHHH
AISARLRNGFIREPSVAVEVESYRPFYILGEVLAPGQYPYVPNMTVESAIAIAGGFSPRA
HHHHHHHCCCCCCCCEEEEECCCCCEEEEEHHHCCCCCCCCCCCCHHHEEEEECCCCCCC
RRDSATLTHPEGGAMVRAVVPLGTPLSPGDTVMVSERWF
CCCCCEEECCCCCEEEEEEEECCCCCCCCCEEEEECCCC
>Mature Secondary Structure 
APVRLDHAFRLSMIAVTAALALGGCMRRSGPVAIQPSNTLDSMAYGGGPAGPGPAAYAS
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHCCCCCCCCCCCCCCC
APMPGPRTEYRLDAGDRLRIVVYGQEGLTNSYAIDASGAITMPLIGSVPARGRTPAELAA
CCCCCCCCEEEECCCCEEEEEEECCCCCCCCEEECCCCCEEECEECCCCCCCCCHHHHHH
AISARLRNGFIREPSVAVEVESYRPFYILGEVLAPGQYPYVPNMTVESAIAIAGGFSPRA
HHHHHHHCCCCCCCCEEEEECCCCCEEEEEHHHCCCCCCCCCCCCHHHEEEEECCCCCCC
RRDSATLTHPEGGAMVRAVVPLGTPLSPGDTVMVSERWF
CCCCCEEECCCCCEEEEEEEECCCCCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8439670; 11481431 [H]