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The map label for this gene is rpfG [H]

Identifier: 86751804

GI number: 86751804

Start: 5326426

End: 5327532

Strand: Reverse

Name: rpfG [H]

Synonym: RPB_4706

Alternate gene names: 86751804

Gene position: 5327532-5326426 (Counterclockwise)

Preceding gene: 86751806

Following gene: 86751802

Centisome position: 99.92

GC content: 68.47

Gene sequence:

>1107_bases
ATGAACTCATTAGCCCGACAATCGGCGCCCCAGACCGAACCGCGGCGACGGCTGATCCTGGCGTCCGACCGCCGCGATCA
GAGCGCGGATCTCGCGCGCATCCTCGCCGGCGTCGCCGAGGTCCAGATCGTCTCGACCGCGGAATTGCCGGAAGCCCCGT
CGCGTGACCTGTCCGGGATCGTCGTCGATATCAATTTGCGCTCCGCCGACAGCGTGCAGCGCGTCAAACAACGGTTGCTC
GGCGGCGGTTACCAGCCCTTCCCCCGGCTGTTCGTGCTGGCCGACGAACTGCATCACGGCTCGATGCAGGCCTGGGCGCT
CGGCGCCACCGACACCATCGCCCGCCCGTTCGATTCGCGTGATCTGCTGGCGCGCATCCGCGCCGCGTTTCCGGATGCGT
CGGAGATCACCGCCGACGCCCGCGCCGAGGCGATGAGCCAGGGCATCGCGGCCGCGCACGGCGTGCTGGTCAAGATGTTC
GATCGGCTGCCGGCCGGCAAGCCGCTGACCTATCAGGACGTGCTCCGGGCCGAAGGACCGATCCTCAAGGCGATCCGGCG
CAGCTCGCTGCGCGAATGGCTCGCCGCGGTCGGCCGCCACCACAACGAGAGCTATCGGCTCGCGCTGTTCGCGACCGGCT
ATGCGGTCGCCTTCGCCCAGCATCTCGGGATGCGCGAGGAAGACCAGCGCCGCCTGACCCGCGCCGCGCTGCTGTTCGAC
GTCGGCAAGGCGTTCGTCGACGTCGCCCTGCTCGACAATGTCGACGCCCTGCAGGGCGAACGGCTGCGCAAATTCCGCGA
GCATCCGCGGCTCGGCTACGATGCGCTGGCCTCCGAGGGCAGCTTCCCGCGCGAGACCCTCGACGTCGTGCTGCATCACC
ACGAACTGCTCGACGGCTCGGGCTATCCCGACGCGCTGCACGGCGACCAGATCAGCGACATCGTCCGCATCACCACCATC
GTCGACATCTTCACGTCGCAGGTGGCGCAGCGCAAGAACCACATCCCGTTGATGCCGCTGCGGGCGTTCTGCCAGATGGA
GGAGATGGGCGACAAGATCGACCAGCGCCTGCTGCAGGCGTTCCGCCCGGTGGCGATGGGCGGTTAG

Upstream 100 bases:

>100_bases
CGGAAAAAACATCGATCGTTAAGAACGCCCATTAAGCAGTGGGAACCGATTTCTCGGTTACGGGTGGCGGAGGCGTATGT
CATTTCCAATCCGGTGATCC

Downstream 100 bases:

>100_bases
TTTCCCCGGTCATTCCGGGTTCACGCGCGTTGCGCGGGTCCCGGAATGACGAGAAGGCCGCGACTACTCCGCCAGCATCT
TGCGCAATTCCGCCTTCGCC

Product: response regulator receiver modulated metal dependent phosphohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 368

Protein sequence:

>368_residues
MNSLARQSAPQTEPRRRLILASDRRDQSADLARILAGVAEVQIVSTAELPEAPSRDLSGIVVDINLRSADSVQRVKQRLL
GGGYQPFPRLFVLADELHHGSMQAWALGATDTIARPFDSRDLLARIRAAFPDASEITADARAEAMSQGIAAAHGVLVKMF
DRLPAGKPLTYQDVLRAEGPILKAIRRSSLREWLAAVGRHHNESYRLALFATGYAVAFAQHLGMREEDQRRLTRAALLFD
VGKAFVDVALLDNVDALQGERLRKFREHPRLGYDALASEGSFPRETLDVVLHHHELLDGSGYPDALHGDQISDIVRITTI
VDIFTSQVAQRKNHIPLMPLRAFCQMEEMGDKIDQRLLQAFRPVAMGG

Sequences:

>Translated_368_residues
MNSLARQSAPQTEPRRRLILASDRRDQSADLARILAGVAEVQIVSTAELPEAPSRDLSGIVVDINLRSADSVQRVKQRLL
GGGYQPFPRLFVLADELHHGSMQAWALGATDTIARPFDSRDLLARIRAAFPDASEITADARAEAMSQGIAAAHGVLVKMF
DRLPAGKPLTYQDVLRAEGPILKAIRRSSLREWLAAVGRHHNESYRLALFATGYAVAFAQHLGMREEDQRRLTRAALLFD
VGKAFVDVALLDNVDALQGERLRKFREHPRLGYDALASEGSFPRETLDVVLHHHELLDGSGYPDALHGDQISDIVRITTI
VDIFTSQVAQRKNHIPLMPLRAFCQMEEMGDKIDQRLLQAFRPVAMGG
>Mature_368_residues
MNSLARQSAPQTEPRRRLILASDRRDQSADLARILAGVAEVQIVSTAELPEAPSRDLSGIVVDINLRSADSVQRVKQRLL
GGGYQPFPRLFVLADELHHGSMQAWALGATDTIARPFDSRDLLARIRAAFPDASEITADARAEAMSQGIAAAHGVLVKMF
DRLPAGKPLTYQDVLRAEGPILKAIRRSSLREWLAAVGRHHNESYRLALFATGYAVAFAQHLGMREEDQRRLTRAALLFD
VGKAFVDVALLDNVDALQGERLRKFREHPRLGYDALASEGSFPRETLDVVLHHHELLDGSGYPDALHGDQISDIVRITTI
VDIFTSQVAQRKNHIPLMPLRAFCQMEEMGDKIDQRLLQAFRPVAMGG

Specific function: Positively regulates the synthesis of extracellular enzymes and extracellular polysaccharides. The cell-cell signaling system encoded by rpf genes is required for full virulence and is implicated in regulation of the formation and dispersal of biofilms [H

COG id: COG2206

COG function: function code T; HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR003607
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 40771; Mature: 40771

Theoretical pI: Translated: 7.47; Mature: 7.47

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSLARQSAPQTEPRRRLILASDRRDQSADLARILAGVAEVQIVSTAELPEAPSRDLSGI
CCCHHHCCCCCCCCHHEEEEECCCCCCHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCEE
VVDINLRSADSVQRVKQRLLGGGYQPFPRLFVLADELHHGSMQAWALGATDTIARPFDSR
EEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEEECCHHHHHCCCCCH
DLLARIRAAFPDASEITADARAEAMSQGIAAAHGVLVKMFDRLPAGKPLTYQDVLRAEGP
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCH
ILKAIRRSSLREWLAAVGRHHNESYRLALFATGYAVAFAQHLGMREEDQRRLTRAALLFD
HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
VGKAFVDVALLDNVDALQGERLRKFREHPRLGYDALASEGSFPRETLDVVLHHHELLDGS
HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCC
GYPDALHGDQISDIVRITTIVDIFTSQVAQRKNHIPLMPLRAFCQMEEMGDKIDQRLLQA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
FRPVAMGG
HHHHHCCC
>Mature Secondary Structure
MNSLARQSAPQTEPRRRLILASDRRDQSADLARILAGVAEVQIVSTAELPEAPSRDLSGI
CCCHHHCCCCCCCCHHEEEEECCCCCCHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCEE
VVDINLRSADSVQRVKQRLLGGGYQPFPRLFVLADELHHGSMQAWALGATDTIARPFDSR
EEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEEECCHHHHHCCCCCH
DLLARIRAAFPDASEITADARAEAMSQGIAAAHGVLVKMFDRLPAGKPLTYQDVLRAEGP
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCH
ILKAIRRSSLREWLAAVGRHHNESYRLALFATGYAVAFAQHLGMREEDQRRLTRAALLFD
HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
VGKAFVDVALLDNVDALQGERLRKFREHPRLGYDALASEGSFPRETLDVVLHHHELLDGS
HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCC
GYPDALHGDQISDIVRITTIVDIFTSQVAQRKNHIPLMPLRAFCQMEEMGDKIDQRLLQA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
FRPVAMGG
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11123673 [H]