Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

Click here to switch to the map view.

The map label for this gene is 86751787

Identifier: 86751787

GI number: 86751787

Start: 5305794

End: 5306186

Strand: Direct

Name: 86751787

Synonym: RPB_4689

Alternate gene names: NA

Gene position: 5305794-5306186 (Clockwise)

Preceding gene: 86751786

Following gene: 86751797

Centisome position: 99.51

GC content: 63.87

Gene sequence:

>393_bases
ATGTTTCACTACACCACGATCGCGACCCTGCTGGCGTTGATGTTCTATTTCTACACTTCGGTGAACGTCGCCCGCGCGCG
AATGCTCTACGGCGTCAAGGCGCCGGCGATCTCCGGCCATCCCGATTTCGAACGCGTCTTCCGGGTGCAGGCCAACACGC
TGGAATGGATGCCGATCTTCCTGCCGTCGCTGTGGCTGTTCGCGTATTATCTCAGCGACGCCTTCGCCGCCGCGATCGGC
GGCGTCTGGATCATCGGCCGGGTGATGTACATGATCGGCTATGCGGATGCGGCGCCGAAGCGCGGCGCCGGTTTCGCGGT
GCAGATGGTCGCCGCCGCGGCCTTGTGGGGCGGCGCGGTCTACGGCGTCGTGCATCAGATGCTGGGGAAGTAA

Upstream 100 bases:

>100_bases
CGGCAACGGATATCTTGAGATGACCGGCTATTGAGTTCAAGCTGGCGGCAACCGGCGGCTTCAGCCGGACAGAATGAATC
ATATCGTTGGGAGCCCTGGG

Downstream 100 bases:

>100_bases
AAACCTCTGCACGTCATTGCGAGCGAAGCGAAGCAATCCAGAGGCCGCATGTGCTGCATTGGATTGCTTCGTCGCTTCGC
TCCTCGCAATGACGGCTCCC

Product: membrane-associated proteins in eicosanoid and glutathione metabolism (MAPEG)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MFHYTTIATLLALMFYFYTSVNVARARMLYGVKAPAISGHPDFERVFRVQANTLEWMPIFLPSLWLFAYYLSDAFAAAIG
GVWIIGRVMYMIGYADAAPKRGAGFAVQMVAAAALWGGAVYGVVHQMLGK

Sequences:

>Translated_130_residues
MFHYTTIATLLALMFYFYTSVNVARARMLYGVKAPAISGHPDFERVFRVQANTLEWMPIFLPSLWLFAYYLSDAFAAAIG
GVWIIGRVMYMIGYADAAPKRGAGFAVQMVAAAALWGGAVYGVVHQMLGK
>Mature_130_residues
MFHYTTIATLLALMFYFYTSVNVARARMLYGVKAPAISGHPDFERVFRVQANTLEWMPIFLPSLWLFAYYLSDAFAAAIG
GVWIIGRVMYMIGYADAAPKRGAGFAVQMVAAAALWGGAVYGVVHQMLGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MAPEG family [H]

Homologues:

Organism=Homo sapiens, GI4505181, Length=88, Percent_Identity=46.5909090909091, Blast_Score=92, Evalue=1e-19,
Organism=Homo sapiens, GI22035629, Length=95, Percent_Identity=38.9473684210526, Blast_Score=71, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001129 [H]

Pfam domain/function: PF01124 MAPEG [H]

EC number: NA

Molecular weight: Translated: 14369; Mature: 14369

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.2 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFHYTTIATLLALMFYFYTSVNVARARMLYGVKAPAISGHPDFERVFRVQANTLEWMPIF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHH
LPSLWLFAYYLSDAFAAAIGGVWIIGRVMYMIGYADAAPKRGAGFAVQMVAAAALWGGAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
YGVVHQMLGK
HHHHHHHHCC
>Mature Secondary Structure
MFHYTTIATLLALMFYFYTSVNVARARMLYGVKAPAISGHPDFERVFRVQANTLEWMPIF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHH
LPSLWLFAYYLSDAFAAAIGGVWIIGRVMYMIGYADAAPKRGAGFAVQMVAAAALWGGAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
YGVVHQMLGK
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]