| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86751447
Identifier: 86751447
GI number: 86751447
Start: 4930422
End: 4930616
Strand: Reverse
Name: 86751447
Synonym: RPB_4345
Alternate gene names: NA
Gene position: 4930616-4930422 (Counterclockwise)
Preceding gene: 86751448
Following gene: 86751446
Centisome position: 92.48
GC content: 68.72
Gene sequence:
>195_bases ATGCCTCCTGAGCCGCCCGCCGCCAAGCCGGCCAAACCTCTCAAGACGAAACCCTGCCCGATCTGCGGCAAGCCGGCGAC GGAGGCATCGCGCCCGTTCTGCAGCGAACGCTGCCGCGATGTCGACCTCAACCGCTGGCTGTCCGGCTCCTACAAGATCC CGGCCGCCCCGGCGGACGACGACGAGGACAACTGA
Upstream 100 bases:
>100_bases AAGATCGTCGGCTCCTACACCAACATCGTCGGCCTGCCGCTGTACGAGACGACGTCGCTGCTCGGCGGCGAGGGCTACCC GATCCGGTTCGGCTGGCTCA
Downstream 100 bases:
>100_bases GGCGGCGGGGCGGGCCCAGAGGCCCTGCCGAACGGACTCGGCCATTGGCCCAGTCGCCACCTCGTTGTGGGTTGAACGGC TCCATCCCCTTCTTGGCACC
Product: zinc-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 64; Mature: 63
Protein sequence:
>64_residues MPPEPPAAKPAKPLKTKPCPICGKPATEASRPFCSERCRDVDLNRWLSGSYKIPAAPADDDEDN
Sequences:
>Translated_64_residues MPPEPPAAKPAKPLKTKPCPICGKPATEASRPFCSERCRDVDLNRWLSGSYKIPAAPADDDEDN >Mature_63_residues PPEPPAAKPAKPLKTKPCPICGKPATEASRPFCSERCRDVDLNRWLSGSYKIPAAPADDDEDN
Specific function: Unknown
COG id: COG3024
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0243 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005584 - InterPro: IPR013088 [H]
Pfam domain/function: PF03884 DUF329 [H]
EC number: NA
Molecular weight: Translated: 6951; Mature: 6820
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 6.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPEPPAAKPAKPLKTKPCPICGKPATEASRPFCSERCRDVDLNRWLSGSYKIPAAPADD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC DEDN CCCC >Mature Secondary Structure PPEPPAAKPAKPLKTKPCPICGKPATEASRPFCSERCRDVDLNRWLSGSYKIPAAPADD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC DEDN CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA