| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86751440
Identifier: 86751440
GI number: 86751440
Start: 4923334
End: 4924569
Strand: Reverse
Name: 86751440
Synonym: RPB_4338
Alternate gene names: NA
Gene position: 4924569-4923334 (Counterclockwise)
Preceding gene: 86751441
Following gene: 86751438
Centisome position: 92.36
GC content: 67.64
Gene sequence:
>1236_bases ATGATTCGCCGTATGCTGATCGCCTTGATTCGGAACCCGTCCCGCCGCGCGTCGATGCCGCGCAAGTCGAGCGTCGCGTT GCTGATGCTGTTTGTGACCGCGTCGCCGGCGCTCGCCGAAACCGCCCCGCCGCTGCCGTTCGCGGTGGCCAATGCGCGGG CGCAAGCCGCCTCGCCGCAGGCGATCGCCGAGTATCGCTACCGGCTGCAGCAATATCAGGCCGCACGCGCCGAATACGAC GCCGACGCCGAGGCGTATTGGACCGCGATCGCCGACAAGCGCCGCACCCGCAACGCCAAGCGCCGCGCCGGCGACCGGAT CACGGCGGATGACTACGTGCTCGCGCAGCCGCCGGTGTACAACGGACCGAAGCGTCCGGTCGATCCGGAACCGACGCCGC AGCCGCCGCGCGAGCGCCGCAGCATTCCGGTGGTCGCCGATTTTCTCAAGGCGGCCGCGCAGCATTATCAGTTCACGCCG CAGCGGCCGGCGGCGGAGATCGAGTTCAAGCGCGCCTATGCGCGCACCGCGATCGCGATGGGGCTGACCCGCGACCAGGC GGTACGGGTCTATGCGTTCGAAACCGGCGGCAATGGCGATCACGACATGCAGTCGGGGCTGAGCAAGTCGCGGCCGGGCT CGCGCGCGATCTCCACCGCGATCGGCTACAATCAGTTGCTCACCACCAACACGCTGGTGCTGCTCGCCGAGCAGGGCAAC CACATCCTCAAGGCGCTGAACGACAAGGCGGCGCGCTTGTCCGGCGCGCCACGTGCCGCGCTGGAGCGCAAGATCGTGGT GGTGAAGCGGATGGTGGCGTTGGCGCGGTCGATCCCGGGCAATTGGAGCGAGCACGAAAAACTCGGCCGCACGCCGCAGG GCTGGGGCGTGCATGCGCTGGTGCTCGACATCGATGTCGGCCCGTTGCTGCAGACCCACAAGCTGCTGACCTCGGTGAAT TTCGCCCGGCAGAAGGGCTACATGCAGCCGTTGACCGCCGCCGAGCTGGAAATGATGAATCTCACCGGCGACAGCACCGG GCTCGACATGGTGACGATGCCGCAGGCGCTGCGCGAAGTGGTGCCGACTGCGAATTTCTTTCAGCGCTCGGGCTACGAGC GCAATCCGGTAGCGATCCGCCACAACACCGTGGCGAAGCTGCTCGCGATCACCGATTCGCGGATGGATGCCAACAGCGCC AATCCCGGCGCGCGCGAACTCGCCGCCGCGTTCTGA
Upstream 100 bases:
>100_bases TTCGCCTGGAAGTAGCGTCCGCTGGCGCGCGCATCGGGTTTGCGATTTGCCGCAGGAGGCGAAGCCGGGATGAAGCGATT CATTCACCCCTGAATGCGAT
Downstream 100 bases:
>100_bases TTGTGCCGGCTGCGATCAGCGGTCCGGCCCGAATTTGAAGCTGCCATCGTCTTCCAGGAACGGTCCGGTGCGCATGTAGA GCTGGCCGTTGGCGCCGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 411; Mature: 411
Protein sequence:
>411_residues MIRRMLIALIRNPSRRASMPRKSSVALLMLFVTASPALAETAPPLPFAVANARAQAASPQAIAEYRYRLQQYQAARAEYD ADAEAYWTAIADKRRTRNAKRRAGDRITADDYVLAQPPVYNGPKRPVDPEPTPQPPRERRSIPVVADFLKAAAQHYQFTP QRPAAEIEFKRAYARTAIAMGLTRDQAVRVYAFETGGNGDHDMQSGLSKSRPGSRAISTAIGYNQLLTTNTLVLLAEQGN HILKALNDKAARLSGAPRAALERKIVVVKRMVALARSIPGNWSEHEKLGRTPQGWGVHALVLDIDVGPLLQTHKLLTSVN FARQKGYMQPLTAAELEMMNLTGDSTGLDMVTMPQALREVVPTANFFQRSGYERNPVAIRHNTVAKLLAITDSRMDANSA NPGARELAAAF
Sequences:
>Translated_411_residues MIRRMLIALIRNPSRRASMPRKSSVALLMLFVTASPALAETAPPLPFAVANARAQAASPQAIAEYRYRLQQYQAARAEYD ADAEAYWTAIADKRRTRNAKRRAGDRITADDYVLAQPPVYNGPKRPVDPEPTPQPPRERRSIPVVADFLKAAAQHYQFTP QRPAAEIEFKRAYARTAIAMGLTRDQAVRVYAFETGGNGDHDMQSGLSKSRPGSRAISTAIGYNQLLTTNTLVLLAEQGN HILKALNDKAARLSGAPRAALERKIVVVKRMVALARSIPGNWSEHEKLGRTPQGWGVHALVLDIDVGPLLQTHKLLTSVN FARQKGYMQPLTAAELEMMNLTGDSTGLDMVTMPQALREVVPTANFFQRSGYERNPVAIRHNTVAKLLAITDSRMDANSA NPGARELAAAF >Mature_411_residues MIRRMLIALIRNPSRRASMPRKSSVALLMLFVTASPALAETAPPLPFAVANARAQAASPQAIAEYRYRLQQYQAARAEYD ADAEAYWTAIADKRRTRNAKRRAGDRITADDYVLAQPPVYNGPKRPVDPEPTPQPPRERRSIPVVADFLKAAAQHYQFTP QRPAAEIEFKRAYARTAIAMGLTRDQAVRVYAFETGGNGDHDMQSGLSKSRPGSRAISTAIGYNQLLTTNTLVLLAEQGN HILKALNDKAARLSGAPRAALERKIVVVKRMVALARSIPGNWSEHEKLGRTPQGWGVHALVLDIDVGPLLQTHKLLTSVN FARQKGYMQPLTAAELEMMNLTGDSTGLDMVTMPQALREVVPTANFFQRSGYERNPVAIRHNTVAKLLAITDSRMDANSA NPGARELAAAF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45196; Mature: 45196
Theoretical pI: Translated: 10.72; Mature: 10.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRRMLIALIRNPSRRASMPRKSSVALLMLFVTASPALAETAPPLPFAVANARAQAASPQ CHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHCCCHHHHCCCCCCCHHHCCHHHCCCHH AIAEYRYRLQQYQAARAEYDADAEAYWTAIADKRRTRNAKRRAGDRITADDYVLAQPPVY HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCC NGPKRPVDPEPTPQPPRERRSIPVVADFLKAAAQHYQFTPQRPAAEIEFKRAYARTAIAM CCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH GLTRDQAVRVYAFETGGNGDHDMQSGLSKSRPGSRAISTAIGYNQLLTTNTLVLLAEQGN CCCCCCEEEEEEEECCCCCCHHHHHCHHHCCCCCHHHHHHHCHHHHHHCCEEEEEECCCC HILKALNDKAARLSGAPRAALERKIVVVKRMVALARSIPGNWSEHEKLGRTPQGWGVHAL HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCEEEE VLDIDVGPLLQTHKLLTSVNFARQKGYMQPLTAAELEMMNLTGDSTGLDMVTMPQALREV EEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHEECCCCCCCCCHHHHHHHHHHH VPTANFFQRSGYERNPVAIRHNTVAKLLAITDSRMDANSANPGARELAAAF CCCHHHHHHCCCCCCCEEEEHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCC >Mature Secondary Structure MIRRMLIALIRNPSRRASMPRKSSVALLMLFVTASPALAETAPPLPFAVANARAQAASPQ CHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHCCCHHHHCCCCCCCHHHCCHHHCCCHH AIAEYRYRLQQYQAARAEYDADAEAYWTAIADKRRTRNAKRRAGDRITADDYVLAQPPVY HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCC NGPKRPVDPEPTPQPPRERRSIPVVADFLKAAAQHYQFTPQRPAAEIEFKRAYARTAIAM CCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH GLTRDQAVRVYAFETGGNGDHDMQSGLSKSRPGSRAISTAIGYNQLLTTNTLVLLAEQGN CCCCCCEEEEEEEECCCCCCHHHHHCHHHCCCCCHHHHHHHCHHHHHHCCEEEEEECCCC HILKALNDKAARLSGAPRAALERKIVVVKRMVALARSIPGNWSEHEKLGRTPQGWGVHAL HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCEEEE VLDIDVGPLLQTHKLLTSVNFARQKGYMQPLTAAELEMMNLTGDSTGLDMVTMPQALREV EEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHEECCCCCCCCCHHHHHHHHHHH VPTANFFQRSGYERNPVAIRHNTVAKLLAITDSRMDANSANPGARELAAAF CCCHHHHHHCCCCCCCEEEEHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA