| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86751423
Identifier: 86751423
GI number: 86751423
Start: 4904361
End: 4904987
Strand: Reverse
Name: 86751423
Synonym: RPB_4321
Alternate gene names: NA
Gene position: 4904987-4904361 (Counterclockwise)
Preceding gene: 86751424
Following gene: 86751420
Centisome position: 92.0
GC content: 68.9
Gene sequence:
>627_bases ATGGCTGCGATCCATCAGGTGAAATTCTGGGACAAGGTCGCCGACCGCTACGCGGCGCGGCCGATCAAGGACCCGGCCGC GTTCGAGGCCATGCTGGCCGACGCCGCCGGCCGGTTGCGCCCGACCGACCATGTGCTGGAGATCGGCTGCGGCACCGGCT CGGCCGCGATCCGCCTCGCGCCGCATGCGGCGGAATGGATCGCGACCGATTTCTCGGCCGAGATGCTGCGCATCGCCCGC GCCAAGCCGGCGCCGGCCAATCTGCGCTTCGTCCTCGCCGACGCAGAGCGCGCCTTCGACGGCGGACCGTTCGATGCGAT CTGCGCCTTCCAGGTGCTGCATCTGGTCGGCGATCTGCCCGGCACGCTGGCGCAGATCCGCGCCCATCTGAAGCCCGGCG GTCTGCTCATCAGCAAGACCTGGTGCTTCGCCGACATGTCGCTCAAGTTGCGCGCGCTGTTTTTCGTGCTGCGCAGCATC GGCCTGTTCCCGCGCGCCCAGGCACTCACCAAACCCGCGCTGCGCCAGACCCTGCGCGACGCCGGCTTCGAGATCGCCGA CGAACGCGTATTCGGCGACAATCCGCACGGGCCGTATATCGTGGCAAGAAGGCCGGGGGCGACTTGA
Upstream 100 bases:
>100_bases TCGGCGGCATCTACATGCTGGCGACGCGGATGCGGGCGCGTGTCGACCTGCGCGCCATCGTCGAGCCGCATCTGTGACCG CCCGGCTGGAAGGACCCGCG
Downstream 100 bases:
>100_bases GGGCAGCGCAGCGTTGAGACGTTCAGGTCTCGATGTATTCCGCCAGGCTGGTCGGCGCGGGCACCGGCAGGCCGTCTTCC TTTAAGCCGTCGATGTGAAA
Product: UbiE/COQ5 methyltransferase
Products: NA
Alternate protein names: Methyltransferase; Methyltransferase UbiE/COQ5 Family; Methyltransferase Domain Family; SAM-Dependent Methyltransferase; UbiE/COQ5 Family Methlytransferase; Ubiquinone/Menaquinone Biosynthesis Methyltransferase
Number of amino acids: Translated: 208; Mature: 207
Protein sequence:
>208_residues MAAIHQVKFWDKVADRYAARPIKDPAAFEAMLADAAGRLRPTDHVLEIGCGTGSAAIRLAPHAAEWIATDFSAEMLRIAR AKPAPANLRFVLADAERAFDGGPFDAICAFQVLHLVGDLPGTLAQIRAHLKPGGLLISKTWCFADMSLKLRALFFVLRSI GLFPRAQALTKPALRQTLRDAGFEIADERVFGDNPHGPYIVARRPGAT
Sequences:
>Translated_208_residues MAAIHQVKFWDKVADRYAARPIKDPAAFEAMLADAAGRLRPTDHVLEIGCGTGSAAIRLAPHAAEWIATDFSAEMLRIAR AKPAPANLRFVLADAERAFDGGPFDAICAFQVLHLVGDLPGTLAQIRAHLKPGGLLISKTWCFADMSLKLRALFFVLRSI GLFPRAQALTKPALRQTLRDAGFEIADERVFGDNPHGPYIVARRPGAT >Mature_207_residues AAIHQVKFWDKVADRYAARPIKDPAAFEAMLADAAGRLRPTDHVLEIGCGTGSAAIRLAPHAAEWIATDFSAEMLRIARA KPAPANLRFVLADAERAFDGGPFDAICAFQVLHLVGDLPGTLAQIRAHLKPGGLLISKTWCFADMSLKLRALFFVLRSIG LFPRAQALTKPALRQTLRDAGFEIADERVFGDNPHGPYIVARRPGAT
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22594; Mature: 22463
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAIHQVKFWDKVADRYAARPIKDPAAFEAMLADAAGRLRPTDHVLEIGCGTGSAAIRLA CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEEC PHAAEWIATDFSAEMLRIARAKPAPANLRFVLADAERAFDGGPFDAICAFQVLHLVGDLP CCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHCCCCCHHHHHHHHHHHHHHCCC GTLAQIRAHLKPGGLLISKTWCFADMSLKLRALFFVLRSIGLFPRAQALTKPALRQTLRD HHHHHHHHHCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH AGFEIADERVFGDNPHGPYIVARRPGAT CCCEEECCCCCCCCCCCCEEEEECCCCC >Mature Secondary Structure AAIHQVKFWDKVADRYAARPIKDPAAFEAMLADAAGRLRPTDHVLEIGCGTGSAAIRLA CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEEC PHAAEWIATDFSAEMLRIARAKPAPANLRFVLADAERAFDGGPFDAICAFQVLHLVGDLP CCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHCCCCCHHHHHHHHHHHHHHCCC GTLAQIRAHLKPGGLLISKTWCFADMSLKLRALFFVLRSIGLFPRAQALTKPALRQTLRD HHHHHHHHHCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH AGFEIADERVFGDNPHGPYIVARRPGAT CCCEEECCCCCCCCCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA