| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is bsr [H]
Identifier: 86751373
GI number: 86751373
Start: 4854642
End: 4855067
Strand: Reverse
Name: bsr [H]
Synonym: RPB_4270
Alternate gene names: 86751373
Gene position: 4855067-4854642 (Counterclockwise)
Preceding gene: 162138516
Following gene: 86751372
Centisome position: 91.06
GC content: 69.72
Gene sequence:
>426_bases GTGAGCCTGACCGAGACCGACCGCGAGTTGATCGCCAGCGCGATCGAGGCGATCAGCCGGCGCTATCGCAACGACTGGCA GGAGGTCGGCGCCGCGCTGCTGACCCGCTCGGGCCGGCGCTTCGTCGGCGTCAATCTCGACGCGTATCTCGGCCGCATGG CGGTGTGCGCCGAAGCCGTCGCGCTCGGACAGGTGATCACGCAGCTCGGCGAGGCCGGCATCGAGACCATCGTGGCGGTG CGCCATCCCAAGCCGCATGAGACTGACCGCGAGGTCCGCGTGGTGTCGCCCTGCGGCGCCTGCCGCGAACTGATCTTCGA CTACGACCGAGGCGCCCGCGTGCTGGTGCCCGGCCCGGACGGCGTCGAAGGCGTCCGCATCAGCGAGTTGCTGCCGAACA AATACAGCCGGGAGCGCGTGTTGTGA
Upstream 100 bases:
>100_bases AGCCGCAGGCCGCCGCCGCGATTGCGGCTGCGTCCCGCGCCGCCGGCGACGATGCCGCGACCGCGCAACTGATCAAGCTC GGCTTGAAGGAGCTGTCTAA
Downstream 100 bases:
>100_bases GGGCTGCGCTGATGATGGCTGCTGCGATCTCCCCGCGCCCGGCGCGCCCCCTCTCCCGCGTGCGGGAGAGGGCTGGGGTG AGGGCGACGCGCACGCCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 141; Mature: 140
Protein sequence:
>141_residues MSLTETDRELIASAIEAISRRYRNDWQEVGAALLTRSGRRFVGVNLDAYLGRMAVCAEAVALGQVITQLGEAGIETIVAV RHPKPHETDREVRVVSPCGACRELIFDYDRGARVLVPGPDGVEGVRISELLPNKYSRERVL
Sequences:
>Translated_141_residues MSLTETDRELIASAIEAISRRYRNDWQEVGAALLTRSGRRFVGVNLDAYLGRMAVCAEAVALGQVITQLGEAGIETIVAV RHPKPHETDREVRVVSPCGACRELIFDYDRGARVLVPGPDGVEGVRISELLPNKYSRERVL >Mature_140_residues SLTETDRELIASAIEAISRRYRNDWQEVGAALLTRSGRRFVGVNLDAYLGRMAVCAEAVALGQVITQLGEAGIETIVAVR HPKPHETDREVRVVSPCGACRELIFDYDRGARVLVPGPDGVEGVRISELLPNKYSRERVL
Specific function: Catalyzes the deamination of the cytosine moiety of the antibiotics blasticidin S, cytomycin and acetylblasticidin S [H]
COG id: COG0295
COG function: function code F; Cytidine deaminase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytidine and deoxycytidylate deaminase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016192 - InterPro: IPR002125 - InterPro: IPR006262 - InterPro: IPR016193 [H]
Pfam domain/function: PF00383 dCMP_cyt_deam_1 [H]
EC number: =3.5.4.23 [H]
Molecular weight: Translated: 15561; Mature: 15430
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLTETDRELIASAIEAISRRYRNDWQEVGAALLTRSGRRFVGVNLDAYLGRMAVCAEAV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHH ALGQVITQLGEAGIETIVAVRHPKPHETDREVRVVSPCGACRELIFDYDRGARVLVPGPD HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHHHHHHHHCCCCCEEEECCCC GVEGVRISELLPNKYSRERVL CCCCEEHHHHCCCCCCCCCCC >Mature Secondary Structure SLTETDRELIASAIEAISRRYRNDWQEVGAALLTRSGRRFVGVNLDAYLGRMAVCAEAV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHH ALGQVITQLGEAGIETIVAVRHPKPHETDREVRVVSPCGACRELIFDYDRGARVLVPGPD HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHHHHHHHHCCCCCEEEECCCC GVEGVRISELLPNKYSRERVL CCCCEEHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1368770 [H]