| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
Click here to switch to the map view.
The map label for this gene is fabG [H]
Identifier: 86751360
GI number: 86751360
Start: 4842961
End: 4843749
Strand: Direct
Name: fabG [H]
Synonym: RPB_4257
Alternate gene names: 86751360
Gene position: 4842961-4843749 (Clockwise)
Preceding gene: 86751358
Following gene: 86751361
Centisome position: 90.83
GC content: 71.74
Gene sequence:
>789_bases ATGACCACCTCCTCGCCCAAAGTCGCCCTCGTCACCGGCGCCGCGCGCGGCATCGGGCTCGCAGCGGTGCGATGCTTTCT CGCGGATGGTTGGCGCGTCGCGCTGCTCGATATCGACGGCGACGGCCTGGCCGCGACGATCGCCCACCTGGCCGCGCCGG AGCGGACGCTGGCGCTGCCTTGCGATGTTTCCGATGCCGGCGCGGTCGCGCGCGGCGTCGGCGCGATCGCGACCCGGTTC GGCCGGCTCGACGCGGTGGTCAACAATGCCGGCATCGCGGTGTTCAAGCCGCTGATGGACACCACGCCGGAGGAATGGCA GCGGGTGCTCGCGGTCAATCTCACCGGGCCGTTCCTGGTGATCCAGGCGGCGGTGCCGCTGCTGCGCGACAGCGGCGGCG GCGCGATCGTCAACATCACCTCGATCTCGGCGCTACGCGCCTCGACGCTGCGGGTCGCCTACGGCGCCAGCAAGGCCGGG CTGGCGCATCTCACCAAGCAGTGCGCGGTCGAACTGGCCGCGCTCGGCATCCGCGTCAACGGCGTCGCGCCCGGCCCGGT CGAGACCGCGATGGCCAAGGCTGTCCACACCCCTGAAATCCGCGCCGACTATCGCGACGCCATCCCGCTCGGCCGTTACG GGCTGGAAGACGAACTGGCGGAGGCGATCTACTTCCTGTGCGGCGACCGCGCCAGCTACATCACCGGGCAGATCCTCGCC GTCGACGGCGGCTTCGACGCCGCCGGCATCGGCCTGCCGACCCTGCGCGGCGAACGGCGGAACGGGTAG
Upstream 100 bases:
>100_bases GGCCTGTCGCGGCCGCAAATGTCCACCGGAGCAACGACGGGGCGCGTCGTGGCGGCCGTGCTGGACGATCGATACGTCAT CACCAACGACAGGACCCGTC
Downstream 100 bases:
>100_bases TTCTCTCCGCCCGCCCATCCTTCGAGGCTCGCTTCGCTCGCGCCTCAGGATGACGCCTCGAGGCTCGCTGGTGCGCCAGC GACAGAACAGCATCCTTCGA
Product: Short-chain dehydrogenase/reductase SDR
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 262; Mature: 261
Protein sequence:
>262_residues MTTSSPKVALVTGAARGIGLAAVRCFLADGWRVALLDIDGDGLAATIAHLAAPERTLALPCDVSDAGAVARGVGAIATRF GRLDAVVNNAGIAVFKPLMDTTPEEWQRVLAVNLTGPFLVIQAAVPLLRDSGGGAIVNITSISALRASTLRVAYGASKAG LAHLTKQCAVELAALGIRVNGVAPGPVETAMAKAVHTPEIRADYRDAIPLGRYGLEDELAEAIYFLCGDRASYITGQILA VDGGFDAAGIGLPTLRGERRNG
Sequences:
>Translated_262_residues MTTSSPKVALVTGAARGIGLAAVRCFLADGWRVALLDIDGDGLAATIAHLAAPERTLALPCDVSDAGAVARGVGAIATRF GRLDAVVNNAGIAVFKPLMDTTPEEWQRVLAVNLTGPFLVIQAAVPLLRDSGGGAIVNITSISALRASTLRVAYGASKAG LAHLTKQCAVELAALGIRVNGVAPGPVETAMAKAVHTPEIRADYRDAIPLGRYGLEDELAEAIYFLCGDRASYITGQILA VDGGFDAAGIGLPTLRGERRNG >Mature_261_residues TTSSPKVALVTGAARGIGLAAVRCFLADGWRVALLDIDGDGLAATIAHLAAPERTLALPCDVSDAGAVARGVGAIATRFG RLDAVVNNAGIAVFKPLMDTTPEEWQRVLAVNLTGPFLVIQAAVPLLRDSGGGAIVNITSISALRASTLRVAYGASKAGL AHLTKQCAVELAALGIRVNGVAPGPVETAMAKAVHTPEIRADYRDAIPLGRYGLEDELAEAIYFLCGDRASYITGQILAV DGGFDAAGIGLPTLRGERRNG
Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI40254992, Length=240, Percent_Identity=36.25, Blast_Score=130, Evalue=1e-30, Organism=Homo sapiens, GI32483357, Length=250, Percent_Identity=34, Blast_Score=124, Evalue=8e-29, Organism=Homo sapiens, GI19923817, Length=247, Percent_Identity=32.7935222672065, Blast_Score=115, Evalue=5e-26, Organism=Homo sapiens, GI7705925, Length=240, Percent_Identity=35.4166666666667, Blast_Score=114, Evalue=7e-26, Organism=Homo sapiens, GI15277342, Length=249, Percent_Identity=36.144578313253, Blast_Score=114, Evalue=7e-26, Organism=Homo sapiens, GI31542939, Length=227, Percent_Identity=32.5991189427313, Blast_Score=106, Evalue=3e-23, Organism=Homo sapiens, GI4503301, Length=209, Percent_Identity=31.1004784688995, Blast_Score=102, Evalue=3e-22, Organism=Homo sapiens, GI5031737, Length=243, Percent_Identity=30.8641975308642, Blast_Score=102, Evalue=5e-22, Organism=Homo sapiens, GI59889578, Length=229, Percent_Identity=35.3711790393013, Blast_Score=100, Evalue=1e-21, Organism=Homo sapiens, GI10190704, Length=242, Percent_Identity=30.9917355371901, Blast_Score=99, Evalue=5e-21, Organism=Homo sapiens, GI4758504, Length=250, Percent_Identity=32.4, Blast_Score=95, Evalue=5e-20, Organism=Homo sapiens, GI126723750, Length=253, Percent_Identity=29.2490118577075, Blast_Score=94, Evalue=1e-19, Organism=Homo sapiens, GI66933014, Length=245, Percent_Identity=28.9795918367347, Blast_Score=93, Evalue=2e-19, Organism=Homo sapiens, GI20149619, Length=192, Percent_Identity=30.7291666666667, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI224922801, Length=172, Percent_Identity=33.7209302325581, Blast_Score=85, Evalue=7e-17, Organism=Homo sapiens, GI126723191, Length=185, Percent_Identity=34.0540540540541, Blast_Score=82, Evalue=5e-16, Organism=Homo sapiens, GI83715985, Length=182, Percent_Identity=35.1648351648352, Blast_Score=82, Evalue=6e-16, Organism=Homo sapiens, GI7706318, Length=138, Percent_Identity=30.4347826086957, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI33667109, Length=195, Percent_Identity=30.7692307692308, Blast_Score=75, Evalue=4e-14, Organism=Homo sapiens, GI109715829, Length=250, Percent_Identity=29.2, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI4504505, Length=185, Percent_Identity=31.3513513513514, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI302344755, Length=101, Percent_Identity=39.6039603960396, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI210032110, Length=195, Percent_Identity=28.2051282051282, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI223718074, Length=214, Percent_Identity=31.3084112149533, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI142976729, Length=194, Percent_Identity=28.3505154639175, Blast_Score=66, Evalue=2e-11, Organism=Escherichia coli, GI1787335, Length=239, Percent_Identity=37.2384937238494, Blast_Score=134, Evalue=5e-33, Organism=Escherichia coli, GI1788459, Length=242, Percent_Identity=33.4710743801653, Blast_Score=123, Evalue=1e-29, Organism=Escherichia coli, GI1786812, Length=249, Percent_Identity=35.7429718875502, Blast_Score=120, Evalue=1e-28, Organism=Escherichia coli, GI2367175, Length=244, Percent_Identity=37.7049180327869, Blast_Score=119, Evalue=3e-28, Organism=Escherichia coli, GI1787905, Length=239, Percent_Identity=33.4728033472803, Blast_Score=118, Evalue=3e-28, Organism=Escherichia coli, GI87082100, Length=251, Percent_Identity=33.8645418326693, Blast_Score=116, Evalue=2e-27, Organism=Escherichia coli, GI1790717, Length=241, Percent_Identity=32.7800829875519, Blast_Score=114, Evalue=5e-27, Organism=Escherichia coli, GI87082160, Length=241, Percent_Identity=30.7053941908714, Blast_Score=108, Evalue=4e-25, Organism=Escherichia coli, GI1789208, Length=245, Percent_Identity=32.2448979591837, Blast_Score=107, Evalue=1e-24, Organism=Escherichia coli, GI1789378, Length=245, Percent_Identity=31.8367346938775, Blast_Score=99, Evalue=3e-22, Organism=Escherichia coli, GI2367365, Length=249, Percent_Identity=30.9236947791165, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI1789057, Length=257, Percent_Identity=31.1284046692607, Blast_Score=88, Evalue=6e-19, Organism=Escherichia coli, GI1787526, Length=223, Percent_Identity=29.5964125560538, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1787820, Length=192, Percent_Identity=27.0833333333333, Blast_Score=63, Evalue=2e-11, Organism=Caenorhabditis elegans, GI25147288, Length=242, Percent_Identity=37.603305785124, Blast_Score=140, Evalue=6e-34, Organism=Caenorhabditis elegans, GI17555706, Length=248, Percent_Identity=35.4838709677419, Blast_Score=120, Evalue=5e-28, Organism=Caenorhabditis elegans, GI17561402, Length=248, Percent_Identity=30.6451612903226, Blast_Score=113, Evalue=8e-26, Organism=Caenorhabditis elegans, GI17560676, Length=246, Percent_Identity=30.4878048780488, Blast_Score=113, Evalue=9e-26, Organism=Caenorhabditis elegans, GI193204405, Length=263, Percent_Identity=33.0798479087452, Blast_Score=112, Evalue=2e-25, Organism=Caenorhabditis elegans, GI71994600, Length=248, Percent_Identity=31.8548387096774, Blast_Score=108, Evalue=2e-24, Organism=Caenorhabditis elegans, GI17562906, Length=263, Percent_Identity=33.0798479087452, Blast_Score=108, Evalue=2e-24, Organism=Caenorhabditis elegans, GI17559104, Length=263, Percent_Identity=33.0798479087452, Blast_Score=107, Evalue=6e-24, Organism=Caenorhabditis elegans, GI17562910, Length=268, Percent_Identity=29.8507462686567, Blast_Score=106, Evalue=1e-23, Organism=Caenorhabditis elegans, GI71994604, Length=246, Percent_Identity=31.3008130081301, Blast_Score=105, Evalue=2e-23, Organism=Caenorhabditis elegans, GI115534694, Length=241, Percent_Identity=33.6099585062241, Blast_Score=105, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17560150, Length=261, Percent_Identity=31.4176245210728, Blast_Score=102, Evalue=2e-22, Organism=Caenorhabditis elegans, GI17551412, Length=260, Percent_Identity=32.3076923076923, Blast_Score=102, Evalue=3e-22, Organism=Caenorhabditis elegans, GI17560220, Length=264, Percent_Identity=31.4393939393939, Blast_Score=100, Evalue=5e-22, Organism=Caenorhabditis elegans, GI17562904, Length=258, Percent_Identity=30.2325581395349, Blast_Score=100, Evalue=6e-22, Organism=Caenorhabditis elegans, GI17538480, Length=259, Percent_Identity=30.1158301158301, Blast_Score=100, Evalue=7e-22, Organism=Caenorhabditis elegans, GI17560332, Length=263, Percent_Identity=30.4182509505703, Blast_Score=100, Evalue=8e-22, Organism=Caenorhabditis elegans, GI17562990, Length=260, Percent_Identity=31.1538461538462, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI17562908, Length=259, Percent_Identity=32.4324324324324, Blast_Score=99, Evalue=2e-21, Organism=Caenorhabditis elegans, GI72000259, Length=278, Percent_Identity=30.9352517985612, Blast_Score=99, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17563726, Length=260, Percent_Identity=29.2307692307692, Blast_Score=99, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17536025, Length=251, Percent_Identity=28.2868525896414, Blast_Score=86, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17531453, Length=258, Percent_Identity=29.0697674418605, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17538182, Length=250, Percent_Identity=30, Blast_Score=85, Evalue=4e-17, Organism=Caenorhabditis elegans, GI17544670, Length=272, Percent_Identity=29.4117647058824, Blast_Score=85, Evalue=4e-17, Organism=Caenorhabditis elegans, GI17508651, Length=249, Percent_Identity=30.1204819277108, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17538486, Length=263, Percent_Identity=28.8973384030418, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17565030, Length=257, Percent_Identity=28.7937743190661, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17561272, Length=220, Percent_Identity=27.2727272727273, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17568967, Length=227, Percent_Identity=29.0748898678414, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17536651, Length=251, Percent_Identity=26.2948207171315, Blast_Score=76, Evalue=1e-14, Organism=Caenorhabditis elegans, GI193203117, Length=196, Percent_Identity=29.0816326530612, Blast_Score=71, Evalue=5e-13, Organism=Caenorhabditis elegans, GI17567345, Length=190, Percent_Identity=27.3684210526316, Blast_Score=70, Evalue=8e-13, Organism=Caenorhabditis elegans, GI71997099, Length=257, Percent_Identity=29.9610894941634, Blast_Score=70, Evalue=9e-13, Organism=Caenorhabditis elegans, GI193203115, Length=194, Percent_Identity=28.8659793814433, Blast_Score=70, Evalue=9e-13, Organism=Caenorhabditis elegans, GI17564282, Length=279, Percent_Identity=25.089605734767, Blast_Score=68, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17508895, Length=192, Percent_Identity=26.0416666666667, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI193207185, Length=146, Percent_Identity=32.8767123287671, Blast_Score=66, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6324126, Length=244, Percent_Identity=30.327868852459, Blast_Score=89, Evalue=8e-19, Organism=Saccharomyces cerevisiae, GI6322861, Length=264, Percent_Identity=28.4090909090909, Blast_Score=77, Evalue=4e-15, Organism=Saccharomyces cerevisiae, GI6322227, Length=201, Percent_Identity=30.3482587064677, Blast_Score=77, Evalue=4e-15, Organism=Saccharomyces cerevisiae, GI6323882, Length=247, Percent_Identity=26.3157894736842, Blast_Score=65, Evalue=9e-12, Organism=Drosophila melanogaster, GI23397609, Length=245, Percent_Identity=37.1428571428571, Blast_Score=129, Evalue=1e-30, Organism=Drosophila melanogaster, GI24639444, Length=242, Percent_Identity=36.7768595041322, Blast_Score=128, Evalue=5e-30, Organism=Drosophila melanogaster, GI21355319, Length=244, Percent_Identity=32.3770491803279, Blast_Score=118, Evalue=4e-27, Organism=Drosophila melanogaster, GI24643142, Length=243, Percent_Identity=34.156378600823, Blast_Score=115, Evalue=4e-26, Organism=Drosophila melanogaster, GI28571526, Length=254, Percent_Identity=34.6456692913386, Blast_Score=112, Evalue=2e-25, Organism=Drosophila melanogaster, GI24644339, Length=249, Percent_Identity=34.5381526104418, Blast_Score=107, Evalue=7e-24, Organism=Drosophila melanogaster, GI21357041, Length=255, Percent_Identity=32.9411764705882, Blast_Score=105, Evalue=4e-23, Organism=Drosophila melanogaster, GI17737361, Length=258, Percent_Identity=31.0077519379845, Blast_Score=90, Evalue=1e-18, Organism=Drosophila melanogaster, GI24644337, Length=247, Percent_Identity=34.0080971659919, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI18859837, Length=185, Percent_Identity=33.5135135135135, Blast_Score=83, Evalue=2e-16, Organism=Drosophila melanogaster, GI221331218, Length=192, Percent_Identity=34.8958333333333, Blast_Score=78, Evalue=5e-15, Organism=Drosophila melanogaster, GI24665243, Length=192, Percent_Identity=34.8958333333333, Blast_Score=78, Evalue=5e-15, Organism=Drosophila melanogaster, GI221331216, Length=193, Percent_Identity=34.7150259067358, Blast_Score=76, Evalue=3e-14, Organism=Drosophila melanogaster, GI24665247, Length=193, Percent_Identity=34.7150259067358, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI281364892, Length=196, Percent_Identity=29.0816326530612, Blast_Score=73, Evalue=1e-13, Organism=Drosophila melanogaster, GI21358495, Length=194, Percent_Identity=27.8350515463918, Blast_Score=71, Evalue=6e-13, Organism=Drosophila melanogaster, GI24641232, Length=203, Percent_Identity=31.5270935960591, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI21357673, Length=241, Percent_Identity=29.4605809128631, Blast_Score=69, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 26951; Mature: 26820
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTSSPKVALVTGAARGIGLAAVRCFLADGWRVALLDIDGDGLAATIAHLAAPERTLALP CCCCCCCEEEEECCCCCHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHCCCCCEEEEE CDVSDAGAVARGVGAIATRFGRLDAVVNNAGIAVFKPLMDTTPEEWQRVLAVNLTGPFLV CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHCCHHHHHEEEEEECCCCEEE IQAAVPLLRDSGGGAIVNITSISALRASTLRVAYGASKAGLAHLTKQCAVELAALGIRVN EEHHHHHHCCCCCCEEEEEECHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHCEEEE GVAPGPVETAMAKAVHTPEIRADYRDAIPLGRYGLEDELAEAIYFLCGDRASYITGQILA CCCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHEEEEEEE VDGGFDAAGIGLPTLRGERRNG EECCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TTSSPKVALVTGAARGIGLAAVRCFLADGWRVALLDIDGDGLAATIAHLAAPERTLALP CCCCCCEEEEECCCCCHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHCCCCCEEEEE CDVSDAGAVARGVGAIATRFGRLDAVVNNAGIAVFKPLMDTTPEEWQRVLAVNLTGPFLV CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHCCHHHHHEEEEEECCCCEEE IQAAVPLLRDSGGGAIVNITSISALRASTLRVAYGASKAGLAHLTKQCAVELAALGIRVN EEHHHHHHCCCCCCEEEEEECHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHCEEEE GVAPGPVETAMAKAVHTPEIRADYRDAIPLGRYGLEDELAEAIYFLCGDRASYITGQILA CCCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHEEEEEEE VDGGFDAAGIGLPTLRGERRNG EECCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]