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The map label for this gene is 86751361

Identifier: 86751361

GI number: 86751361

Start: 4844127

End: 4844429

Strand: Direct

Name: 86751361

Synonym: RPB_4258

Alternate gene names: NA

Gene position: 4844127-4844429 (Clockwise)

Preceding gene: 86751360

Following gene: 86751366

Centisome position: 90.86

GC content: 65.68

Gene sequence:

>303_bases
ATGGGCATCTACGTCTACATGCTGCACTGTTCGGACGGCTCGTACTACGTCGGCAGCGCGACGGGGGATGATCTGTCCGC
GCGGATCGATCAGCACAATGCCGGCGCCTTCCCCGGCTACACGTTCGTCCGTCGACCGGTCACACTGGTCTGGTCGCAGC
ATTTCGACCGCATCACCGACGGCATCGCCGCCGAGCGGCAGATCAAAGGCTGGGGTCGGGCCAAGAAGGAAGCGCTGGCA
AGGTCCGATTGGGACGGCGTGCAGCAATTGGCGCGTCGCCGCGGCGGCAAGCCAGCGCGGTGA

Upstream 100 bases:

>100_bases
TCGAAGGATGCGGCGACGCGGCACCGACGAGATAATTGACAATCAGCACGGCGCAGTCATCCTCAAGATGCGAGTATAGC
CAGCTTCGAAGGACTCGGCG

Downstream 100 bases:

>100_bases
GCTGTGCCGAAACAGCATCCTTCGAGGCTCGCTACGCTCGCGCCTCAGGATGACGGAGTCCCTGTTGTGGGGCTCGAGAC
AAGCACAGCGTCATCCTGAG

Product: excinuclease ABC subunit C

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 100; Mature: 99

Protein sequence:

>100_residues
MGIYVYMLHCSDGSYYVGSATGDDLSARIDQHNAGAFPGYTFVRRPVTLVWSQHFDRITDGIAAERQIKGWGRAKKEALA
RSDWDGVQQLARRRGGKPAR

Sequences:

>Translated_100_residues
MGIYVYMLHCSDGSYYVGSATGDDLSARIDQHNAGAFPGYTFVRRPVTLVWSQHFDRITDGIAAERQIKGWGRAKKEALA
RSDWDGVQQLARRRGGKPAR
>Mature_99_residues
GIYVYMLHCSDGSYYVGSATGDDLSARIDQHNAGAFPGYTFVRRPVTLVWSQHFDRITDGIAAERQIKGWGRAKKEALAR
SDWDGVQQLARRRGGKPAR

Specific function: Unknown

COG id: COG2827

COG function: function code L; Predicted endonuclease containing a URI domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0213 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000305 [H]

Pfam domain/function: PF01541 GIY-YIG [H]

EC number: NA

Molecular weight: Translated: 11187; Mature: 11056

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIYVYMLHCSDGSYYVGSATGDDLSARIDQHNAGAFPGYTFVRRPVTLVWSQHFDRITD
CCEEEEEEEECCCCEEEECCCCCCHHHHCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHH
GIAAERQIKGWGRAKKEALARSDWDGVQQLARRRGGKPAR
HHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
GIYVYMLHCSDGSYYVGSATGDDLSARIDQHNAGAFPGYTFVRRPVTLVWSQHFDRITD
CEEEEEEEECCCCEEEECCCCCCHHHHCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHH
GIAAERQIKGWGRAKKEALARSDWDGVQQLARRRGGKPAR
HHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11016950 [H]