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The map label for this gene is 86751285

Identifier: 86751285

GI number: 86751285

Start: 4749934

End: 4751322

Strand: Reverse

Name: 86751285

Synonym: RPB_4178

Alternate gene names: NA

Gene position: 4751322-4749934 (Counterclockwise)

Preceding gene: 86751286

Following gene: 86751284

Centisome position: 89.12

GC content: 68.03

Gene sequence:

>1389_bases
GTGACCATGGCCGTCCCCTCGCTCAAACGCCTGGTGCTCGCAGGCGCCATTGCCCTCGCTGCCGCGCTGCCGGCGACGCC
CGGCTTCGCCGCGGCGAAGATCCAGAATCTGGTGACGCCCGGCGGCATCCAGGCCTGGTTCGTGCAGGACGCCACCGTGC
CGCTGATTTCGATGGAGTATTCCTTCGGCGGCGGCGCCAGTCAGGACCCGGCCGACAAGCCCGGCGTCGGCCATATGGTC
GCCAATCTGCTCGACGAAGGCTCGGGCGACATGGATTCGGCGACGTTCCACGAACGGCTCGACCGCCGCGCCATCGAACT
GTCCTTTGCCGTCACCCGCGACACTTTCCGCGGTTCGCTGCGGATGCTGACGGAAAACCGCGACGAAGCCTTCGGCTTGC
TGCGCAGCTCGCTCACCGCGCCGCGGTTCGAGGCCAAGGACGTCGAGCGGATCCGCGCGCAACTGATCTCGACGCTGCGC
CGCCAGTCGCTCGACCCGAACACCATGGCGACCCGCAAGTTTCTCGAAGTCGCGTTCGGCGATCATCCCTATGGCCGGCC
CTCGACCGGCACGCTGGAGAGCCTGCCGAAAGTCACCATCGACGACATGAAGGCCTACACCGGCCGCGTGCTGGCGAAGG
ACACGCTGAAGATCGCCGTGGTCGGCGACGTCGATGCCGCGACGCTGGCGAAACTGCTCGACGACACCTTCGGCAACCTG
CCGGCCAAGGCGCAGCTCACGCCGGTGGCCGACATCGTCGCCACCAAGCCGCCACAGCGCAGCTTCGTGCCGCTCGACGT
GCCGCAGACCGTGGTGATGTTCGGCGGCCCCGGCCTCAAGCGACACGACCCGGATTTCATGGCCGGCTATGTGGTCAACC
ACATTCTCGGCGGTGGCTCGCTGTCGTCCCGGCTGTATCGCGAGGTCCGCGAGAAGCGCGGTCTGGCTTATTCGATCTAC
GTCTCGATGCTGTGGATGCAGCATTCGGCGCTGTTCACCGGCGCCACCGGCACCCGCGCCGACCGCGCGACGCAGTCCAT
CGAGGCGATCGACACCGAGATCAAGCGCATCGCCGACGAGGGCCCGACCCAGCAGGAGCTCGACGAGGCGAAATCGTATC
TCAATGGCTCGCAGATGCTGTCGCTCGACACCTCGGCGAAGCTCGCCCAGGCGCTGCTGCAATATCAGAACGACGGGCTG
CCGATCGACTACATCGACAAGCGCAGCGACGTGATCAACGCGGTGACGCTCGACGACGCCAGGCGTGCCGCGAAGCGGCT
GTGGTCGGGCGGCCTGCTGACCGTCGTCGTCGGCCGCACCCCGCAGGCCGCCGCCGGTCCCGCCGCAGTCAAACCCGCCG
GCACCCCGCCGCCGCCGCGGGCGAACTGA

Upstream 100 bases:

>100_bases
ATCAGGTCCGCGCCGTGGCGCAGCAATTCCTCGACCGCAACCGCTCGGTGACCGGCTATCTGGTCAAGGGCACGCTGCCA
AAGCCCGAGGAGAAACGCTC

Downstream 100 bases:

>100_bases
CCAGCGGCACCGTCATCCTGAGGAGCGCGCCGATTGGCGCGCGTCTCGAAGGATGTGCTACAGAGCCGGTCATCCTTCGA
GGCTCGCTGCGCTCGCACCT

Product: peptidase M16-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 462; Mature: 461

Protein sequence:

>462_residues
MTMAVPSLKRLVLAGAIALAAALPATPGFAAAKIQNLVTPGGIQAWFVQDATVPLISMEYSFGGGASQDPADKPGVGHMV
ANLLDEGSGDMDSATFHERLDRRAIELSFAVTRDTFRGSLRMLTENRDEAFGLLRSSLTAPRFEAKDVERIRAQLISTLR
RQSLDPNTMATRKFLEVAFGDHPYGRPSTGTLESLPKVTIDDMKAYTGRVLAKDTLKIAVVGDVDAATLAKLLDDTFGNL
PAKAQLTPVADIVATKPPQRSFVPLDVPQTVVMFGGPGLKRHDPDFMAGYVVNHILGGGSLSSRLYREVREKRGLAYSIY
VSMLWMQHSALFTGATGTRADRATQSIEAIDTEIKRIADEGPTQQELDEAKSYLNGSQMLSLDTSAKLAQALLQYQNDGL
PIDYIDKRSDVINAVTLDDARRAAKRLWSGGLLTVVVGRTPQAAAGPAAVKPAGTPPPPRAN

Sequences:

>Translated_462_residues
MTMAVPSLKRLVLAGAIALAAALPATPGFAAAKIQNLVTPGGIQAWFVQDATVPLISMEYSFGGGASQDPADKPGVGHMV
ANLLDEGSGDMDSATFHERLDRRAIELSFAVTRDTFRGSLRMLTENRDEAFGLLRSSLTAPRFEAKDVERIRAQLISTLR
RQSLDPNTMATRKFLEVAFGDHPYGRPSTGTLESLPKVTIDDMKAYTGRVLAKDTLKIAVVGDVDAATLAKLLDDTFGNL
PAKAQLTPVADIVATKPPQRSFVPLDVPQTVVMFGGPGLKRHDPDFMAGYVVNHILGGGSLSSRLYREVREKRGLAYSIY
VSMLWMQHSALFTGATGTRADRATQSIEAIDTEIKRIADEGPTQQELDEAKSYLNGSQMLSLDTSAKLAQALLQYQNDGL
PIDYIDKRSDVINAVTLDDARRAAKRLWSGGLLTVVVGRTPQAAAGPAAVKPAGTPPPPRAN
>Mature_461_residues
TMAVPSLKRLVLAGAIALAAALPATPGFAAAKIQNLVTPGGIQAWFVQDATVPLISMEYSFGGGASQDPADKPGVGHMVA
NLLDEGSGDMDSATFHERLDRRAIELSFAVTRDTFRGSLRMLTENRDEAFGLLRSSLTAPRFEAKDVERIRAQLISTLRR
QSLDPNTMATRKFLEVAFGDHPYGRPSTGTLESLPKVTIDDMKAYTGRVLAKDTLKIAVVGDVDAATLAKLLDDTFGNLP
AKAQLTPVADIVATKPPQRSFVPLDVPQTVVMFGGPGLKRHDPDFMAGYVVNHILGGGSLSSRLYREVREKRGLAYSIYV
SMLWMQHSALFTGATGTRADRATQSIEAIDTEIKRIADEGPTQQELDEAKSYLNGSQMLSLDTSAKLAQALLQYQNDGLP
IDYIDKRSDVINAVTLDDARRAAKRLWSGGLLTVVVGRTPQAAAGPAAVKPAGTPPPPRAN

Specific function: Unknown

COG id: COG0612

COG function: function code R; Predicted Zn-dependent peptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M16 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011249
- InterPro:   IPR011237
- InterPro:   IPR007863 [H]

Pfam domain/function: PF05193 Peptidase_M16_C [H]

EC number: NA

Molecular weight: Translated: 49654; Mature: 49523

Theoretical pI: Translated: 8.67; Mature: 8.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMAVPSLKRLVLAGAIALAAALPATPGFAAAKIQNLVTPGGIQAWFVQDATVPLISMEY
CCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
SFGGGASQDPADKPGVGHMVANLLDEGSGDMDSATFHERLDRRAIELSFAVTRDTFRGSL
CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHEEEEEEEEHHHHHHHH
RMLTENRDEAFGLLRSSLTAPRFEAKDVERIRAQLISTLRRQSLDPNTMATRKFLEVAFG
HHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC
DHPYGRPSTGTLESLPKVTIDDMKAYTGRVLAKDTLKIAVVGDVDAATLAKLLDDTFGNL
CCCCCCCCCCCHHHCCCCCHHHHHHHHCCEEEECCEEEEEEECCCHHHHHHHHHHHHCCC
PAKAQLTPVADIVATKPPQRSFVPLDVPQTVVMFGGPGLKRHDPDFMAGYVVNHILGGGS
CCCCCCCHHHHHHHCCCCCCCEEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCH
LSSRLYREVREKRGLAYSIYVSMLWMQHSALFTGATGTRADRATQSIEAIDTEIKRIADE
HHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHCC
GPTQQELDEAKSYLNGSQMLSLDTSAKLAQALLQYQNDGLPIDYIDKRSDVINAVTLDDA
CCCHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHCCCCCCCCCCCCCHHHEEEEEHHHH
RRAAKRLWSGGLLTVVVGRTPQAAAGPAAVKPAGTPPPPRAN
HHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TMAVPSLKRLVLAGAIALAAALPATPGFAAAKIQNLVTPGGIQAWFVQDATVPLISMEY
CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
SFGGGASQDPADKPGVGHMVANLLDEGSGDMDSATFHERLDRRAIELSFAVTRDTFRGSL
CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHEEEEEEEEHHHHHHHH
RMLTENRDEAFGLLRSSLTAPRFEAKDVERIRAQLISTLRRQSLDPNTMATRKFLEVAFG
HHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC
DHPYGRPSTGTLESLPKVTIDDMKAYTGRVLAKDTLKIAVVGDVDAATLAKLLDDTFGNL
CCCCCCCCCCCHHHCCCCCHHHHHHHHCCEEEECCEEEEEEECCCHHHHHHHHHHHHCCC
PAKAQLTPVADIVATKPPQRSFVPLDVPQTVVMFGGPGLKRHDPDFMAGYVVNHILGGGS
CCCCCCCHHHHHHHCCCCCCCEEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCH
LSSRLYREVREKRGLAYSIYVSMLWMQHSALFTGATGTRADRATQSIEAIDTEIKRIADE
HHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHCC
GPTQQELDEAKSYLNGSQMLSLDTSAKLAQALLQYQNDGLPIDYIDKRSDVINAVTLDDA
CCCHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHCCCCCCCCCCCCCHHHEEEEEHHHH
RRAAKRLWSGGLLTVVVGRTPQAAAGPAAVKPAGTPPPPRAN
HHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]