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The map label for this gene is yaeJ [C]

Identifier: 86751284

GI number: 86751284

Start: 4749377

End: 4749796

Strand: Reverse

Name: yaeJ [C]

Synonym: RPB_4177

Alternate gene names: 86751284

Gene position: 4749796-4749377 (Counterclockwise)

Preceding gene: 86751285

Following gene: 86751283

Centisome position: 89.09

GC content: 67.86

Gene sequence:

>420_bases
ATGCTGCGGATCAGCCGCAATCTTGCGATCGACGACGACGACATCGAGATCAGCTTCGTGCGCGCGTCCGGCCCCGGCGG
CCAGAACGTCAACAAGCTGTCGACCGCCGCCCAGCTCCGCTTCGACACGACCAAAATCGCGCTGCCGGAGGACGCCGCGC
TGCGGCTGATCAATCTGGCCGGCCAGCGCATGACCAAGGAGGGCGTCATCGTCATCCACGCCCAGCGCTTCCGCACCCAG
GAGCGCAACAAGGCGGATGCGATCGACCGGCTGCTCGAATTGCTCCGCGCCGCGATGGTGCGGCCGATCCCGCGCCGCGC
GACCCGCCCGACGCTCGGCTCCAAGAAGCGCCGCCTCGAAGGCAAGAAGCACCGCGGCGACATCAAAGCCGGCCGCAGCG
GCAAGAGCTTCGACGATTGA

Upstream 100 bases:

>100_bases
CGCGCGTCTCGAAGGATGTGCTACAGAGCCGGTCATCCTTCGAGGCTCGCTGCGCTCGCACCTCAGGATGACGTTTTCCC
TGTGGCCGAGCGGGTGCCCC

Downstream 100 bases:

>100_bases
TGCGCTCGGCTCGGCCATCCCACTTGGGCTCCGTCATCCTGAGGTGCGAGCGAAGCGAGCCTCGAAGGATGGGCCGCAAG
GGCCTCGCCCGTTGCCGCAT

Product: peptidyl-tRNA hydrolase domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MLRISRNLAIDDDDIEISFVRASGPGGQNVNKLSTAAQLRFDTTKIALPEDAALRLINLAGQRMTKEGVIVIHAQRFRTQ
ERNKADAIDRLLELLRAAMVRPIPRRATRPTLGSKKRRLEGKKHRGDIKAGRSGKSFDD

Sequences:

>Translated_139_residues
MLRISRNLAIDDDDIEISFVRASGPGGQNVNKLSTAAQLRFDTTKIALPEDAALRLINLAGQRMTKEGVIVIHAQRFRTQ
ERNKADAIDRLLELLRAAMVRPIPRRATRPTLGSKKRRLEGKKHRGDIKAGRSGKSFDD
>Mature_139_residues
MLRISRNLAIDDDDIEISFVRASGPGGQNVNKLSTAAQLRFDTTKIALPEDAALRLINLAGQRMTKEGVIVIHAQRFRTQ
ERNKADAIDRLLELLRAAMVRPIPRRATRPTLGSKKRRLEGKKHRGDIKAGRSGKSFDD

Specific function: Unknown

COG id: COG1186

COG function: function code J; Protein chain release factor B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic/mitochondrial release factor family [H]

Homologues:

Organism=Escherichia coli, GI1786389, Length=132, Percent_Identity=44.6969696969697, Blast_Score=112, Evalue=1e-26,
Organism=Drosophila melanogaster, GI19921098, Length=137, Percent_Identity=34.3065693430657, Blast_Score=72, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000352 [H]

Pfam domain/function: PF00472 RF-1 [H]

EC number: NA

Molecular weight: Translated: 15540; Mature: 15540

Theoretical pI: Translated: 11.63; Mature: 11.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRISRNLAIDDDDIEISFVRASGPGGQNVNKLSTAAQLRFDTTKIALPEDAALRLINLA
CEEECCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHEEECCEEEECCCHHHHHHHHHH
GQRMTKEGVIVIHAQRFRTQERNKADAIDRLLELLRAAMVRPIPRRATRPTLGSKKRRLE
CCCCCCCCEEEEEHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCC
GKKHRGDIKAGRSGKSFDD
CCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLRISRNLAIDDDDIEISFVRASGPGGQNVNKLSTAAQLRFDTTKIALPEDAALRLINLA
CEEECCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHEEECCEEEECCCHHHHHHHHHH
GQRMTKEGVIVIHAQRFRTQERNKADAIDRLLELLRAAMVRPIPRRATRPTLGSKKRRLE
CCCCCCCCEEEEEHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCC
GKKHRGDIKAGRSGKSFDD
CCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1624453 [H]