Click here to switch to the map view.

The map label for this gene is petP [H]

Identifier: 86751281

GI number: 86751281

Start: 4745203

End: 4745763

Strand: Reverse

Name: petP [H]

Synonym: RPB_4174

Alternate gene names: 86751281

Gene position: 4745763-4745203 (Counterclockwise)

Preceding gene: 86751283

Following gene: 86751280

Centisome position: 89.01

GC content: 65.78

Gene sequence:

>561_bases
ATGGCTGACATAAATTTCAACGACGACCTGCACGGCGACGGCGCGGCGATCGCGCTGCCGCGCCCGGCGGATTCGTCGGT
CGCGGCGCCGCGCTGGGACATCATCGAGCTGCTGTTCTTCGCCTATCGCGACTTCGTCGGCGATGCCGACCACGTGCTGG
AGGCATTCGGGTTCGGCCGCGCGCATCACCGGGTGGTGCATTTCGTCTGCCGCTATCCCGGGCTGACGGTCGCGGATCTG
CTCGACGTGCTGCGCATCACCAAGCAGTCGCTGGGGCGAGTGCTGAAGCAATTGCTCGACGAGGGCTATATCGTGCAGAA
GGCCGGCGACAACGACCGCCGTCAGCGCCTTCTTTTCGCCACCGCAAAGGGCGAGGCGCTGGTGGTGAAACTCGCCGGCC
TGCAGACCGACCGGATTGCACGCGCGCTGCGCGGCTTCAGCCCGGGCGAAGCCGAGGCCGTGCGCAAGTTCCTGCGCGCC
ATGATCGATTGCGATGATCCGGACAAGGTGCTCCAGACCATTCTGCAGTCAGACGGCGCCGTCGCGAAGGATGTCACGTG
A

Upstream 100 bases:

>100_bases
CATCTGGTTATCGGACTTCGCGTGGAAAGGTCGCAAGCGGAATAGTCGAATATTTCGTCTTGGTTGGCCGTTTTGTAACA
TAAGACCCAGATATGTCAAC

Downstream 100 bases:

>100_bases
TCCAATTAGCAACCCTGGCGAAGAAGCCGGTCCGCCCCGCCGACGATGCGCCGCATCTTCTGCTGGTCGACGACGACCGG
CGCATCCGCGATCTGTTGTC

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 185

Protein sequence:

>186_residues
MADINFNDDLHGDGAAIALPRPADSSVAAPRWDIIELLFFAYRDFVGDADHVLEAFGFGRAHHRVVHFVCRYPGLTVADL
LDVLRITKQSLGRVLKQLLDEGYIVQKAGDNDRRQRLLFATAKGEALVVKLAGLQTDRIARALRGFSPGEAEAVRKFLRA
MIDCDDPDKVLQTILQSDGAVAKDVT

Sequences:

>Translated_186_residues
MADINFNDDLHGDGAAIALPRPADSSVAAPRWDIIELLFFAYRDFVGDADHVLEAFGFGRAHHRVVHFVCRYPGLTVADL
LDVLRITKQSLGRVLKQLLDEGYIVQKAGDNDRRQRLLFATAKGEALVVKLAGLQTDRIARALRGFSPGEAEAVRKFLRA
MIDCDDPDKVLQTILQSDGAVAKDVT
>Mature_185_residues
ADINFNDDLHGDGAAIALPRPADSSVAAPRWDIIELLFFAYRDFVGDADHVLEAFGFGRAHHRVVHFVCRYPGLTVADLL
DVLRITKQSLGRVLKQLLDEGYIVQKAGDNDRRQRLLFATAKGEALVVKLAGLQTDRIARALRGFSPGEAEAVRKFLRAM
IDCDDPDKVLQTILQSDGAVAKDVT

Specific function: Necessary for photosynthetic and respiratory growth [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 20499; Mature: 20367

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: PS01117 HTH_MARR_1 ; PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADINFNDDLHGDGAAIALPRPADSSVAAPRWDIIELLFFAYRDFVGDADHVLEAFGFGR
CCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCH
AHHRVVHFVCRYPGLTVADLLDVLRITKQSLGRVLKQLLDEGYIVQKAGDNDRRQRLLFA
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHEEEEE
TAKGEALVVKLAGLQTDRIARALRGFSPGEAEAVRKFLRAMIDCDDPDKVLQTILQSDGA
ECCCCEEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
VAKDVT
CCCCCC
>Mature Secondary Structure 
ADINFNDDLHGDGAAIALPRPADSSVAAPRWDIIELLFFAYRDFVGDADHVLEAFGFGR
CCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCH
AHHRVVHFVCRYPGLTVADLLDVLRITKQSLGRVLKQLLDEGYIVQKAGDNDRRQRLLFA
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHEEEEE
TAKGEALVVKLAGLQTDRIARALRGFSPGEAEAVRKFLRAMIDCDDPDKVLQTILQSDGA
ECCCCEEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
VAKDVT
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1323023 [H]