| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86751235
Identifier: 86751235
GI number: 86751235
Start: 4700527
End: 4701594
Strand: Reverse
Name: 86751235
Synonym: RPB_4128
Alternate gene names: NA
Gene position: 4701594-4700527 (Counterclockwise)
Preceding gene: 86751236
Following gene: 86751234
Centisome position: 88.18
GC content: 48.41
Gene sequence:
>1068_bases ATGCAGTGGCGCACCGCAAATATTCTTTTCGCAGACGTTAAGGGTTATAGCGCTCTCAAAGATACGCAAATGAAGGTATT TGTCGAAGTTGTGCTAAGTAATATCGCGCGTAGGCTACAAGAGATTCCGATAAAATATAAGAATACTTGGGGAGATGGAA TAGTAATAATTTGTGACAAAATAGAAGATGTGTGTGAGGCGGCTCTTCATTTGAAGGATCTATTTCAGGGTTTCAATTGG CGCCGGCATGATTTGCCAAAACTTGATATCAGGATTTCAATTCATCATGGGGAGTATCTGGAGGGGTCTGACCCGTTCAC CGAACGTCCCACATTTTGTGGCCGAAGTGTGGTGACGGCGGCTCGAATCGAGCCAGTCACTCCGCCAGGCAAAATATGGA TGACGGCTCAAGCTGCCAGTATGCTGAAGCAGCACATGAGCGGGGATGACGCGCCATATTTTGCGATTGATCACGTCGGC GAAATTCAACTCCCAAAGAAGTACGGAGTCATCGAAATAGCAACGTTACGTCGAACCGCCGAGCCACCGCTGTGCGATCA AGATCTCAAGGAGATACGGGAGGCGGAGCGTGTGCGACTTGAACTTGGGGGTGTGGTAGATCGGGATAGTGATATCCGAG AATTGGTGAGCAGAGACCAGATCAGATCGTATGCAGTTGTCATAGGAGTTGTCGTGCATCGCGGCGAAGTTCTGCTGGTA AAAAGGAATGATCGAAGCGAAGGATTGGAATGGATGTTTCCTTCGGGAAAGAAATGGCCCAATCAAGATGAAGTTTCAGT AATTGAAAAGGAGGTAATGGAGGAGGCGGGAATCACCTGTGGCGTGATTGCGAAAATCGCTCACGTCGAAAAGCACCCCA CTACTGGGTTCAAATGCAGCTACTTTCATATGGAGCCTGGGGATGATGTCGAAATCGTGAACGGCGATCCGTTGGAAAAC GATGATGTCCAATGGGTGCCAATTTCTGACGGGTTAGCCAAGATTGGATCTGCCATAAATCCCGATGTTGCTAGATTCCT GGCAGGATTCAGGGTTGATTCCGCCTGA
Upstream 100 bases:
>100_bases TCTGCTAGTGTCAACGCTGCCCGGCCAAAATTGACCTTTTAACGGCTTGACCTTCCCGAGTGCGCAATCACAATTAGTGA TTGTAGTTGGGGGGTGATTC
Downstream 100 bases:
>100_bases TTTGGAGCCAAGGATGACACAGCTAATGTTGTGTCTGCCCCCGGGGTCTGCCATAAAGCCTCGGTCGGAGAAGACGATGG CTGTACGTGGATCGTTTCAC
Product: putative adenylate/guanylate cyclase
Products: NA
Alternate protein names: Calphotin; Adenylyl Cyclase Class-3/4/Guanylyl Cyclase
Number of amino acids: Translated: 355; Mature: 355
Protein sequence:
>355_residues MQWRTANILFADVKGYSALKDTQMKVFVEVVLSNIARRLQEIPIKYKNTWGDGIVIICDKIEDVCEAALHLKDLFQGFNW RRHDLPKLDIRISIHHGEYLEGSDPFTERPTFCGRSVVTAARIEPVTPPGKIWMTAQAASMLKQHMSGDDAPYFAIDHVG EIQLPKKYGVIEIATLRRTAEPPLCDQDLKEIREAERVRLELGGVVDRDSDIRELVSRDQIRSYAVVIGVVVHRGEVLLV KRNDRSEGLEWMFPSGKKWPNQDEVSVIEKEVMEEAGITCGVIAKIAHVEKHPTTGFKCSYFHMEPGDDVEIVNGDPLEN DDVQWVPISDGLAKIGSAINPDVARFLAGFRVDSA
Sequences:
>Translated_355_residues MQWRTANILFADVKGYSALKDTQMKVFVEVVLSNIARRLQEIPIKYKNTWGDGIVIICDKIEDVCEAALHLKDLFQGFNW RRHDLPKLDIRISIHHGEYLEGSDPFTERPTFCGRSVVTAARIEPVTPPGKIWMTAQAASMLKQHMSGDDAPYFAIDHVG EIQLPKKYGVIEIATLRRTAEPPLCDQDLKEIREAERVRLELGGVVDRDSDIRELVSRDQIRSYAVVIGVVVHRGEVLLV KRNDRSEGLEWMFPSGKKWPNQDEVSVIEKEVMEEAGITCGVIAKIAHVEKHPTTGFKCSYFHMEPGDDVEIVNGDPLEN DDVQWVPISDGLAKIGSAINPDVARFLAGFRVDSA >Mature_355_residues MQWRTANILFADVKGYSALKDTQMKVFVEVVLSNIARRLQEIPIKYKNTWGDGIVIICDKIEDVCEAALHLKDLFQGFNW RRHDLPKLDIRISIHHGEYLEGSDPFTERPTFCGRSVVTAARIEPVTPPGKIWMTAQAASMLKQHMSGDDAPYFAIDHVG EIQLPKKYGVIEIATLRRTAEPPLCDQDLKEIREAERVRLELGGVVDRDSDIRELVSRDQIRSYAVVIGVVVHRGEVLLV KRNDRSEGLEWMFPSGKKWPNQDEVSVIEKEVMEEAGITCGVIAKIAHVEKHPTTGFKCSYFHMEPGDDVEIVNGDPLEN DDVQWVPISDGLAKIGSAINPDVARFLAGFRVDSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39942; Mature: 39942
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: PS50125 GUANYLATE_CYCLASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQWRTANILFADVKGYSALKDTQMKVFVEVVLSNIARRLQEIPIKYKNTWGDGIVIICDK CCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEEEHH IEDVCEAALHLKDLFQGFNWRRHDLPKLDIRISIHHGEYLEGSDPFTERPTFCGRSVVTA HHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHH ARIEPVTPPGKIWMTAQAASMLKQHMSGDDAPYFAIDHVGEIQLPKKYGVIEIATLRRTA HHCCCCCCCCCEEEEHHHHHHHHHHCCCCCCCEEEECCCCCEECCCCCCEEEEEEHHCCC EPPLCDQDLKEIREAERVRLELGGVVDRDSDIRELVSRDQIRSYAVVIGVVVHRGEVLLV CCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCEEEE KRNDRSEGLEWMFPSGKKWPNQDEVSVIEKEVMEEAGITCGVIAKIAHVEKHPTTGFKCS ECCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEE YFHMEPGDDVEIVNGDPLENDDVQWVPISDGLAKIGSAINPDVARFLAGFRVDSA EEECCCCCCEEEECCCCCCCCCEEEEECCCCHHHHCCCCCHHHHHHHHHCCCCCC >Mature Secondary Structure MQWRTANILFADVKGYSALKDTQMKVFVEVVLSNIARRLQEIPIKYKNTWGDGIVIICDK CCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEEEHH IEDVCEAALHLKDLFQGFNWRRHDLPKLDIRISIHHGEYLEGSDPFTERPTFCGRSVVTA HHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHH ARIEPVTPPGKIWMTAQAASMLKQHMSGDDAPYFAIDHVGEIQLPKKYGVIEIATLRRTA HHCCCCCCCCCEEEEHHHHHHHHHHCCCCCCCEEEECCCCCEECCCCCCEEEEEEHHCCC EPPLCDQDLKEIREAERVRLELGGVVDRDSDIRELVSRDQIRSYAVVIGVVVHRGEVLLV CCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCEEEE KRNDRSEGLEWMFPSGKKWPNQDEVSVIEKEVMEEAGITCGVIAKIAHVEKHPTTGFKCS ECCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEE YFHMEPGDDVEIVNGDPLENDDVQWVPISDGLAKIGSAINPDVARFLAGFRVDSA EEECCCCCCEEEECCCCCCCCCEEEEECCCCHHHHCCCCCHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA