| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is nudG [C]
Identifier: 86751234
GI number: 86751234
Start: 4699998
End: 4700501
Strand: Reverse
Name: nudG [C]
Synonym: RPB_4127
Alternate gene names: 86751234
Gene position: 4700501-4699998 (Counterclockwise)
Preceding gene: 86751235
Following gene: 86751233
Centisome position: 88.16
GC content: 51.19
Gene sequence:
>504_bases ATGTTGTGTCTGCCCCCGGGGTCTGCCATAAAGCCTCGGTCGGAGAAGACGATGGCTGTACGTGGATCGTTTCACGAAAA ACGTGAGGTTGCCGTGGCGATAGTTGTTAGGCGCCACGAGGGAAACACTTCTGTATTGATGGTCCGCAGAGCGGACCCAA ATGAAAATTGCCCTAGGTGGGTTTTCCCTGGAGGAAAAATCGATGCGGGAGAAAGCGCTGGAGCAGCCGCAAAACGAGAG CTAAAAGAAGAGACTGGGATCGATGTATCGAGGCCCGATATTATCGGATGTCGAATTCATCCTGTTTCCGGTCTGAAGAT TCACTATATTAGTTTTCAATATAAGCGCGGTCTGCCGCGAATCCGAGAACCGAAGAAGCTTGATCAGATTGACTGGGTTA GTGTCGATTCCCTCGGCTCTGTGGTCGGCCATTCTCTGTTTGCTCCGGTTGAGGCTTTTTTGCAGAATAGTGATAGGTCC GCTCAGGCGGATTTTGGCGTGTGA
Upstream 100 bases:
>100_bases TTAGCCAAGATTGGATCTGCCATAAATCCCGATGTTGCTAGATTCCTGGCAGGATTCAGGGTTGATTCCGCCTGATTTGG AGCCAAGGATGACACAGCTA
Downstream 100 bases:
>100_bases TCAATCGGACGGTCACTGTAGTTGGCTAGTCGCGTCCGGGTGAACGGCTTGCGCACCCTATCATCTTTGGCGAGATAGTC TGCTTCGCTCAACTCGCCCT
Product: NUDIX hydrolase
Products: CMP; diphosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MLCLPPGSAIKPRSEKTMAVRGSFHEKREVAVAIVVRRHEGNTSVLMVRRADPNENCPRWVFPGGKIDAGESAGAAAKRE LKEETGIDVSRPDIIGCRIHPVSGLKIHYISFQYKRGLPRIREPKKLDQIDWVSVDSLGSVVGHSLFAPVEAFLQNSDRS AQADFGV
Sequences:
>Translated_167_residues MLCLPPGSAIKPRSEKTMAVRGSFHEKREVAVAIVVRRHEGNTSVLMVRRADPNENCPRWVFPGGKIDAGESAGAAAKRE LKEETGIDVSRPDIIGCRIHPVSGLKIHYISFQYKRGLPRIREPKKLDQIDWVSVDSLGSVVGHSLFAPVEAFLQNSDRS AQADFGV >Mature_167_residues MLCLPPGSAIKPRSEKTMAVRGSFHEKREVAVAIVVRRHEGNTSVLMVRRADPNENCPRWVFPGGKIDAGESAGAAAKRE LKEETGIDVSRPDIIGCRIHPVSGLKIHYISFQYKRGLPRIREPKKLDQIDWVSVDSLGSVVGHSLFAPVEAFLQNSDRS AQADFGV
Specific function: Specific For Pyrimidine Substrates. Acts On 5-Methyl- Dctp, Ctp And Dctp In Decreasing Order. [C]
COG id: COG1051
COG function: function code F; ADP-ribose pyrophosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.6.1.- [C]
Molecular weight: Translated: 18385; Mature: 18385
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLCLPPGSAIKPRSEKTMAVRGSFHEKREVAVAIVVRRHEGNTSVLMVRRADPNENCPRW CEECCCCCCCCCCCCCEEEEECCCCCHHEEEEEEEEEECCCCCEEEEEECCCCCCCCCEE VFPGGKIDAGESAGAAAKRELKEETGIDVSRPDIIGCRIHPVSGLKIHYISFQYKRGLPR ECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEEEEEEECCCCCC IREPKKLDQIDWVSVDSLGSVVGHSLFAPVEAFLQNSDRSAQADFGV CCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MLCLPPGSAIKPRSEKTMAVRGSFHEKREVAVAIVVRRHEGNTSVLMVRRADPNENCPRW CEECCCCCCCCCCCCCEEEEECCCCCHHEEEEEEEEEECCCCCEEEEEECCCCCCCCCEE VFPGGKIDAGESAGAAAKRELKEETGIDVSRPDIIGCRIHPVSGLKIHYISFQYKRGLPR ECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEEEEEEECCCCCC IREPKKLDQIDWVSVDSLGSVVGHSLFAPVEAFLQNSDRSAQADFGV CCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: Fe; Mn [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: CTP; H2O [C]
Specific reaction: CTP + H2O = CMP + diphosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA