| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86751007
Identifier: 86751007
GI number: 86751007
Start: 4454025
End: 4454591
Strand: Direct
Name: 86751007
Synonym: RPB_3899
Alternate gene names: NA
Gene position: 4454025-4454591 (Clockwise)
Preceding gene: 86751006
Following gene: 86751008
Centisome position: 83.54
GC content: 65.78
Gene sequence:
>567_bases ATGAACATCGACCAACTCGCATCGACCGTGAAGGCCCTGCAGGACGAGATCGCCACGCTGCGCGCGGAGGCGGATATCCG CCGCATCCAGGCGCGCTACATGTTCCTGTGCGACACGCCCTGCCCCGAATTCGGCGTCGACAACGACGACGAGCGGATCG AGCGCATCCTCGATCTGTACACCGAGGACGCGATCTGGGAGGGCGTCGGCGCTTACTACGACAACCAGTTCGGCCGCAGC GTCGGCAAGGACGCGATCCGCAAGCACTTCCAGGGCTTCTGGGGGCCGACACGGGTGCCGGGGCTGGTGCTGAATGTGCA CTATCTCACCTCCGAGCAGATCCACGTCCGCGGCGACGAGGCCGATGGCCAGTGGGTGCACTGCCAGCCCTGGATCTTCA CCGACGGCTCGTCGCTGCTGCGCTCCAGCCGGCTGAACAATTTGTTCCGCAAGGTGGACGGCGTCTGGAAGGTCGCGCGC ACGCGCACCGAAAATCTGTTCGTCGCGCCGCTGACGCCGGGCTGGGCGCAGAGCGTGCCGGAGAAATCGGTGCTGATGCA GCCGTGA
Upstream 100 bases:
>100_bases CTGATCTACTTCAACCGCTCCTATCACGACCTCGCGCCGGCGCAGCGCGACCTGTGCCACCAGGACTGATCCCGCTTCGA CCAGAGAAAGCCGCATCCCG
Downstream 100 bases:
>100_bases CAGCAACGCCCTGGTTGGGATGACAAGGAAGGATTTGCGATGACCACCACGACGCCCGCTTTCGCCGAGGCCGTGCCGCT CGAGGCGGACGCGCTGCACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MNIDQLASTVKALQDEIATLRAEADIRRIQARYMFLCDTPCPEFGVDNDDERIERILDLYTEDAIWEGVGAYYDNQFGRS VGKDAIRKHFQGFWGPTRVPGLVLNVHYLTSEQIHVRGDEADGQWVHCQPWIFTDGSSLLRSSRLNNLFRKVDGVWKVAR TRTENLFVAPLTPGWAQSVPEKSVLMQP
Sequences:
>Translated_188_residues MNIDQLASTVKALQDEIATLRAEADIRRIQARYMFLCDTPCPEFGVDNDDERIERILDLYTEDAIWEGVGAYYDNQFGRS VGKDAIRKHFQGFWGPTRVPGLVLNVHYLTSEQIHVRGDEADGQWVHCQPWIFTDGSSLLRSSRLNNLFRKVDGVWKVAR TRTENLFVAPLTPGWAQSVPEKSVLMQP >Mature_188_residues MNIDQLASTVKALQDEIATLRAEADIRRIQARYMFLCDTPCPEFGVDNDDERIERILDLYTEDAIWEGVGAYYDNQFGRS VGKDAIRKHFQGFWGPTRVPGLVLNVHYLTSEQIHVRGDEADGQWVHCQPWIFTDGSSLLRSSRLNNLFRKVDGVWKVAR TRTENLFVAPLTPGWAQSVPEKSVLMQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21482; Mature: 21482
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIDQLASTVKALQDEIATLRAEADIRRIQARYMFLCDTPCPEFGVDNDDERIERILDLY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCHHHHHHHHHHH TEDAIWEGVGAYYDNQFGRSVGKDAIRKHFQGFWGPTRVPGLVLNVHYLTSEQIHVRGDE HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCEEEEEEEEECCCEEEEECCC ADGQWVHCQPWIFTDGSSLLRSSRLNNLFRKVDGVWKVARTRTENLFVAPLTPGWAQSVP CCCCEEEECCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHCCC EKSVLMQP CCCCCCCC >Mature Secondary Structure MNIDQLASTVKALQDEIATLRAEADIRRIQARYMFLCDTPCPEFGVDNDDERIERILDLY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCHHHHHHHHHHH TEDAIWEGVGAYYDNQFGRSVGKDAIRKHFQGFWGPTRVPGLVLNVHYLTSEQIHVRGDE HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCEEEEEEEEECCCEEEEECCC ADGQWVHCQPWIFTDGSSLLRSSRLNNLFRKVDGVWKVARTRTENLFVAPLTPGWAQSVP CCCCEEEECCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHCCC EKSVLMQP CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA