Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

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The map label for this gene is 86751008

Identifier: 86751008

GI number: 86751008

Start: 4454631

End: 4455041

Strand: Direct

Name: 86751008

Synonym: RPB_3900

Alternate gene names: NA

Gene position: 4454631-4455041 (Clockwise)

Preceding gene: 86751007

Following gene: 86751009

Centisome position: 83.55

GC content: 70.07

Gene sequence:

>411_bases
ATGACCACCACGACGCCCGCTTTCGCCGAGGCCGTGCCGCTCGAGGCGGACGCGCTGCACCGCCTGTTGCAGGCCTGGTT
TCGCGCCGAGGGGACCGACGATCCCGCCGCGATCCGCGCCCGCTTCGACGACGGCTTCACCATGGTGACGCCGGCCGGCA
AGGTGCTGACCTACGAGCAGTTCTCCGGCGGCCTGCCGACGATGCGCGGATCGCGGCCGACGCTGATCATGCAGATCAGC
GACGTCGTGGTGCGCTATCTCGACGCGTCCACGGCGCTCGTCACCTATTGCGAGCGGCAGATCCAGGACAGCGGCACCAC
CGACCGGATCTCCACCGCGCTGCTGATCGCCCGCGCCGACCGGCCGACGCCGATGTGGCGGCATCTGCAGGAGACCTGGA
TCACGCCGTGA

Upstream 100 bases:

>100_bases
GCCGCTGACGCCGGGCTGGGCGCAGAGCGTGCCGGAGAAATCGGTGCTGATGCAGCCGTGACAGCAACGCCCTGGTTGGG
ATGACAAGGAAGGATTTGCG

Downstream 100 bases:

>100_bases
TCACGCTGCCCGACCCAGGACGATCCGCGGAGACCGCCATGCCCGAGGCTGAAATGTGGAAGACCTACCGCTATCAGGGC
CACCGCGTCATGGTGATCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 135

Protein sequence:

>136_residues
MTTTTPAFAEAVPLEADALHRLLQAWFRAEGTDDPAAIRARFDDGFTMVTPAGKVLTYEQFSGGLPTMRGSRPTLIMQIS
DVVVRYLDASTALVTYCERQIQDSGTTDRISTALLIARADRPTPMWRHLQETWITP

Sequences:

>Translated_136_residues
MTTTTPAFAEAVPLEADALHRLLQAWFRAEGTDDPAAIRARFDDGFTMVTPAGKVLTYEQFSGGLPTMRGSRPTLIMQIS
DVVVRYLDASTALVTYCERQIQDSGTTDRISTALLIARADRPTPMWRHLQETWITP
>Mature_135_residues
TTTTPAFAEAVPLEADALHRLLQAWFRAEGTDDPAAIRARFDDGFTMVTPAGKVLTYEQFSGGLPTMRGSRPTLIMQISD
VVVRYLDASTALVTYCERQIQDSGTTDRISTALLIARADRPTPMWRHLQETWITP

Specific function: Unknown

COG id: COG4460

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15129; Mature: 14998

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTTTPAFAEAVPLEADALHRLLQAWFRAEGTDDPAAIRARFDDGFTMVTPAGKVLTYEQ
CCCCCCCHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHEEEECCCCEEEECCCCCEEEHHH
FSGGLPTMRGSRPTLIMQISDVVVRYLDASTALVTYCERQIQDSGTTDRISTALLIARAD
HCCCCCCCCCCCCEEEEHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHEEEECC
RPTPMWRHLQETWITP
CCCHHHHHHHHHCCCC
>Mature Secondary Structure 
TTTTPAFAEAVPLEADALHRLLQAWFRAEGTDDPAAIRARFDDGFTMVTPAGKVLTYEQ
CCCCCCHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHEEEECCCCEEEECCCCCEEEHHH
FSGGLPTMRGSRPTLIMQISDVVVRYLDASTALVTYCERQIQDSGTTDRISTALLIARAD
HCCCCCCCCCCCCEEEEHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHEEEECC
RPTPMWRHLQETWITP
CCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA