Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

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The map label for this gene is murI [H]

Identifier: 86750804

GI number: 86750804

Start: 4234251

End: 4235045

Strand: Direct

Name: murI [H]

Synonym: RPB_3694

Alternate gene names: 86750804

Gene position: 4234251-4235045 (Clockwise)

Preceding gene: 86750803

Following gene: 86750805

Centisome position: 79.42

GC content: 70.31

Gene sequence:

>795_bases
GTGGGTTCGCATCCGAACATTCTGGTTTTCGATTCCGGCCTCGGCGGGCTGACGGTGCTGCGCGAGGTCGTGAAACTGCG
GCCGGATGCGCGCTACGTCTATGTCGGCGACGATGCGTTCTTCCCTTACGGCCAGAAGAGCGAGGAGGCGGTGATCGGCC
GCGTCGTGCCGCTGATCGGCGAACTGATCGCGGAACACGCGCCGGACCTCGTGGTGATCGCCTGCAACACCGCCTCGACC
ATGACGCTGGCGCCGCTGCGGGCGCGCTACGCGGTGCCGTTCGTCGGCACCGTGCCGGCGATCAAGCCGGCCTGCGCGGC
GTCCAGGACCAAGCGCGTTTCGGTGCTCGGCACCAGCGGCACGGTGCGGCTGGAATACACCCGCGCGCTGATCCGTGATT
TCGCCGGCGGCTGCGACGTCAATCTGGTCGGCTCGGTGCATCTGGCCGCGCTGGCCGAGGCCGCGCTCGGCGGCGCCGAC
GTGCCGGACGAGGCGATCCGCGCCGAGATCGCGCCCTGCTTCGTCGCCGGCGACGGCGCGGACGACCGCACCGACAGCAT
CGTGCTCGCCTGCACGCATTACCCGCTGCTGCTCGACCGGCTGGTTCGGCTGGCGCCGTGGCCGGTGGACTGGATCGACC
CGGCGCCGGCGATCGCCCGGCGGGTGGCCACGCTGCTCGGCGCGGGGTCCGGCCATGGCGACGCCCCCGGCGTTCGGATG
GTGTTCACGTCCGGACGGCTACACCGTCTCACCACGACTATTTCTCCGTATTTGGGCGGACACATTTCGGCCTGA

Upstream 100 bases:

>100_bases
GATGCGATAGCCCTGCCGCTCGCGGGGACAGGAACCGCGGGGCACAGCCATCCCGTTGCGCGGCTACCGAAAACTAACCA
AGCTGGACTAGGATCGCGTC

Downstream 100 bases:

>100_bases
ATGCTTTCCGCCGAGCCCCGGGACTGCTAGTTTCGCAGGCAGGGAGGAGCCGCAATGACCAAAACAACCTTGATCGCTCT
CGCTTTCGTCGCGCTTGCCG

Product: glutamate racemase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 263

Protein sequence:

>264_residues
MGSHPNILVFDSGLGGLTVLREVVKLRPDARYVYVGDDAFFPYGQKSEEAVIGRVVPLIGELIAEHAPDLVVIACNTAST
MTLAPLRARYAVPFVGTVPAIKPACAASRTKRVSVLGTSGTVRLEYTRALIRDFAGGCDVNLVGSVHLAALAEAALGGAD
VPDEAIRAEIAPCFVAGDGADDRTDSIVLACTHYPLLLDRLVRLAPWPVDWIDPAPAIARRVATLLGAGSGHGDAPGVRM
VFTSGRLHRLTTTISPYLGGHISA

Sequences:

>Translated_264_residues
MGSHPNILVFDSGLGGLTVLREVVKLRPDARYVYVGDDAFFPYGQKSEEAVIGRVVPLIGELIAEHAPDLVVIACNTAST
MTLAPLRARYAVPFVGTVPAIKPACAASRTKRVSVLGTSGTVRLEYTRALIRDFAGGCDVNLVGSVHLAALAEAALGGAD
VPDEAIRAEIAPCFVAGDGADDRTDSIVLACTHYPLLLDRLVRLAPWPVDWIDPAPAIARRVATLLGAGSGHGDAPGVRM
VFTSGRLHRLTTTISPYLGGHISA
>Mature_263_residues
GSHPNILVFDSGLGGLTVLREVVKLRPDARYVYVGDDAFFPYGQKSEEAVIGRVVPLIGELIAEHAPDLVVIACNTASTM
TLAPLRARYAVPFVGTVPAIKPACAASRTKRVSVLGTSGTVRLEYTRALIRDFAGGCDVNLVGSVHLAALAEAALGGADV
PDEAIRAEIAPCFVAGDGADDRTDSIVLACTHYPLLLDRLVRLAPWPVDWIDPAPAIARRVATLLGAGSGHGDAPGVRMV
FTSGRLHRLTTTISPYLGGHISA

Specific function: Provides the (R)-glutamate required for cell wall biosynthesis [H]

COG id: COG0796

COG function: function code M; Glutamate racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aspartate/glutamate racemases family [H]

Homologues:

Organism=Escherichia coli, GI87082355, Length=222, Percent_Identity=42.7927927927928, Blast_Score=166, Evalue=1e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015942
- InterPro:   IPR001920
- InterPro:   IPR018187
- InterPro:   IPR004391 [H]

Pfam domain/function: PF01177 Asp_Glu_race [H]

EC number: =5.1.1.3 [H]

Molecular weight: Translated: 27726; Mature: 27595

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: PS00923 ASP_GLU_RACEMASE_1 ; PS00924 ASP_GLU_RACEMASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSHPNILVFDSGLGGLTVLREVVKLRPDARYVYVGDDAFFPYGQKSEEAVIGRVVPLIG
CCCCCCEEEEECCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHH
ELIAEHAPDLVVIACNTASTMTLAPLRARYAVPFVGTVPAIKPACAASRTKRVSVLGTSG
HHHHHCCCCEEEEEECCCCCEEEHHHHHHCCCCCCCCCCCCCCHHHHCCCCEEEEEECCC
TVRLEYTRALIRDFAGGCDVNLVGSVHLAALAEAALGGADVPDEAIRAEIAPCFVAGDGA
EEEEHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCCCCCCHHHHHHHCCEEEEECCCC
DDRTDSIVLACTHYPLLLDRLVRLAPWPVDWIDPAPAIARRVATLLGAGSGHGDAPGVRM
CCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEE
VFTSGRLHRLTTTISPYLGGHISA
EEECCCEEEHHHHHHHHCCCCCCC
>Mature Secondary Structure 
GSHPNILVFDSGLGGLTVLREVVKLRPDARYVYVGDDAFFPYGQKSEEAVIGRVVPLIG
CCCCCEEEEECCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHH
ELIAEHAPDLVVIACNTASTMTLAPLRARYAVPFVGTVPAIKPACAASRTKRVSVLGTSG
HHHHHCCCCEEEEEECCCCCEEEHHHHHHCCCCCCCCCCCCCCHHHHCCCCEEEEEECCC
TVRLEYTRALIRDFAGGCDVNLVGSVHLAALAEAALGGADVPDEAIRAEIAPCFVAGDGA
EEEEHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCCCCCCHHHHHHHCCEEEEECCCC
DDRTDSIVLACTHYPLLLDRLVRLAPWPVDWIDPAPAIARRVATLLGAGSGHGDAPGVRM
CCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEE
VFTSGRLHRLTTTISPYLGGHISA
EEECCCEEEHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA