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The map label for this gene is ycjC [C]

Identifier: 86750805

GI number: 86750805

Start: 4235100

End: 4235483

Strand: Direct

Name: ycjC [C]

Synonym: RPB_3695

Alternate gene names: 86750805

Gene position: 4235100-4235483 (Clockwise)

Preceding gene: 86750804

Following gene: 86750806

Centisome position: 79.43

GC content: 64.58

Gene sequence:

>384_bases
ATGACCAAAACAACCTTGATCGCTCTCGCTTTCGTCGCGCTTGCCGGCGCCGCCTTCGCCCAGCAAAGCGGGATCAAGCG
GACGCCGCTGCAGAAGGTCGAGTTCCCGGACGGCTTTGTGACGATCAGCGGGCTTGCGGAACTTCCTGCCGGCGGCAGCA
TTGGCCGCCACACCCACCCCGGAATCGAGACCGGGTATCTGCTGGAAGGTGAAGCTGTGATGAGCATCGACGGCCAGGCC
GACAAACACCTCAAGGCCGGCGATTCCTATGCGATTCCCGCAGGCGTCGTGCACGACGCCAGGGTCCACGGCGACAAGGG
CGCGAAAGTGCTGGCGGTTTGGGTGGTCGACAAGACCAAGCCGCTCGCCACGCCGGCGCCTTAG

Upstream 100 bases:

>100_bases
CACCACGACTATTTCTCCGTATTTGGGCGGACACATTTCGGCCTGAATGCTTTCCGCCGAGCCCCGGGACTGCTAGTTTC
GCAGGCAGGGAGGAGCCGCA

Downstream 100 bases:

>100_bases
CCCGTGCGCGGAACCATTCGACGCATCCCGCTGCGGCGGCGGCTGGTCGCCGACCTGATGTGGGCCTCCGAGGGCGTGCC
GCTGATCACCTATCAGCGCC

Product: cupin region

Products: NA

Alternate protein names: Cupin 2 Barrel; Cupin 2 Conserved Barrel Domain-Containing Protein; Cupin 2 Conserved Barrel; Cupin Region; Cupin 2 Conserved Barrel Domain Protein

Number of amino acids: Translated: 127; Mature: 126

Protein sequence:

>127_residues
MTKTTLIALAFVALAGAAFAQQSGIKRTPLQKVEFPDGFVTISGLAELPAGGSIGRHTHPGIETGYLLEGEAVMSIDGQA
DKHLKAGDSYAIPAGVVHDARVHGDKGAKVLAVWVVDKTKPLATPAP

Sequences:

>Translated_127_residues
MTKTTLIALAFVALAGAAFAQQSGIKRTPLQKVEFPDGFVTISGLAELPAGGSIGRHTHPGIETGYLLEGEAVMSIDGQA
DKHLKAGDSYAIPAGVVHDARVHGDKGAKVLAVWVVDKTKPLATPAP
>Mature_126_residues
TKTTLIALAFVALAGAAFAQQSGIKRTPLQKVEFPDGFVTISGLAELPAGGSIGRHTHPGIETGYLLEGEAVMSIDGQAD
KHLKAGDSYAIPAGVVHDARVHGDKGAKVLAVWVVDKTKPLATPAP

Specific function: Unknown

COG id: COG1917

COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13109; Mature: 12978

Theoretical pI: Translated: 7.91; Mature: 7.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKTTLIALAFVALAGAAFAQQSGIKRTPLQKVEFPDGFVTISGLAELPAGGSIGRHTHP
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCEEEECCCCCCCCCCCCCCCCCC
GIETGYLLEGEAVMSIDGQADKHLKAGDSYAIPAGVVHDARVHGDKGAKVLAVWVVDKTK
CCCCCEEECCCEEEEECCCCCCCEECCCCCCCCCCCEECCEEECCCCCEEEEEEEEECCC
PLATPAP
CCCCCCC
>Mature Secondary Structure 
TKTTLIALAFVALAGAAFAQQSGIKRTPLQKVEFPDGFVTISGLAELPAGGSIGRHTHP
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCEEEECCCCCCCCCCCCCCCCCC
GIETGYLLEGEAVMSIDGQADKHLKAGDSYAIPAGVVHDARVHGDKGAKVLAVWVVDKTK
CCCCCEEECCCEEEEECCCCCCCEECCCCCCCCCCCEECCEEECCCCCEEEEEEEEECCC
PLATPAP
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA