| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is paaB [H]
Identifier: 86750750
GI number: 86750750
Start: 4177339
End: 4177626
Strand: Reverse
Name: paaB [H]
Synonym: RPB_3640
Alternate gene names: 86750750
Gene position: 4177626-4177339 (Counterclockwise)
Preceding gene: 86750751
Following gene: 86750749
Centisome position: 78.36
GC content: 67.36
Gene sequence:
>288_bases ATGAGCACGCCGAATACGGCGCTGTGGGAAGTCTTCATCCGCAGCCGCAATGGCCTCGCGCACAAGCACGTCGGCTCGCT GCACGCCGCCGACGCCACGCTGGCACTGCAGGCGGCCCGCGACGTCTACACCCGCCGCGGCGAGGGGCTGTCGATCTGGG TGGTGCCGTCGAGCGCGATCACGGCGAGCGATCCCGCCGAGGCGGGCATGATGTTCGAGCCGGCCGAGAGCAAGATCTAT CGTCACCCGACGTTCTACGAGGTGCCCGATGAAGTCGGGCATATGTAG
Upstream 100 bases:
>100_bases GCGCCTGGGTTCGCGAAGCCGCGATGGCCTTCGCCGAAAAGCGCAAGAAGAAGATCGCGGCCTAGACGCCGCGGGATTGT CCATCTTCGGGAGGCATTCG
Downstream 100 bases:
>100_bases TTCGCCGCCGTGGCCGGCACATAACGCGACGTCATCCTGAGCTGCCGCCGCGCAGCGGCGGCTTCGAAGGATGCGCAGCC GGTACCCGTCGCCGCATCCT
Product: phenylacetate-CoA oxygenase subunit PaaB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 95; Mature: 94
Protein sequence:
>95_residues MSTPNTALWEVFIRSRNGLAHKHVGSLHAADATLALQAARDVYTRRGEGLSIWVVPSSAITASDPAEAGMMFEPAESKIY RHPTFYEVPDEVGHM
Sequences:
>Translated_95_residues MSTPNTALWEVFIRSRNGLAHKHVGSLHAADATLALQAARDVYTRRGEGLSIWVVPSSAITASDPAEAGMMFEPAESKIY RHPTFYEVPDEVGHM >Mature_94_residues STPNTALWEVFIRSRNGLAHKHVGSLHAADATLALQAARDVYTRRGEGLSIWVVPSSAITASDPAEAGMMFEPAESKIYR HPTFYEVPDEVGHM
Specific function: May be part of a multicomponent oxygenase involved in phenylacetyl-CoA hydroxylation [H]
COG id: COG3460
COG function: function code Q; Uncharacterized enzyme of phenylacetate metabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787655, Length=95, Percent_Identity=62.1052631578947, Blast_Score=129, Evalue=4e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009359 [H]
Pfam domain/function: PF06243 PaaB [H]
EC number: NA
Molecular weight: Translated: 10424; Mature: 10293
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTPNTALWEVFIRSRNGLAHKHVGSLHAADATLALQAARDVYTRRGEGLSIWVVPSSAI CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCC TASDPAEAGMMFEPAESKIYRHPTFYEVPDEVGHM CCCCCCCCCEEECCCCCCEEECCCCEECCHHHCCC >Mature Secondary Structure STPNTALWEVFIRSRNGLAHKHVGSLHAADATLALQAARDVYTRRGEGLSIWVVPSSAI CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCC TASDPAEAGMMFEPAESKIYRHPTFYEVPDEVGHM CCCCCCCCCEEECCCCCCEEECCCCEECCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9748275; 9278503; 10766858 [H]