| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is paaA [H]
Identifier: 86750751
GI number: 86750751
Start: 4177662
End: 4178729
Strand: Reverse
Name: paaA [H]
Synonym: RPB_3641
Alternate gene names: 86750751
Gene position: 4178729-4177662 (Counterclockwise)
Preceding gene: 86750753
Following gene: 86750750
Centisome position: 78.38
GC content: 65.54
Gene sequence:
>1068_bases TTGACCGTCCAATTGGTCAATTATATTTCCAACAAGGCCGGGCCGCGCGCCCGAGCCTGCGAGGAAACTGCCGAGGACGC CGCCATGTACACACAGGCGCTCAACACCACCGAGGCCGAGGATCGCAACCTCGAGGACGCCGGCCGCGCCGCGCTGTTCC AGGCGCGGATCGATGCCGAAGAGCGGATCGAGCCCAACGACTGGATGCCGGCGGCGTATCGCAAGACGCTGACGCGGCAG ATCTCGCAGCACGCCCATTCCGAGATCGTCGGCATGTTGCCGGAAGGCAATTGGATCACCCGCGCGCCGACGCTGCGCCG CAAGGCCGCCTTGCTCGCCAAGGTGCAGGACGAATGCGGCCACGGGCTGTATCTCTACGCCGCCGCAGAGACGCTCGGCT CGTCGCGCGAAGAGCTGGTCGATCAGATGCTGAGCGGCAAGGCGAAGTACTCCTCGATCTTCAACTACCCGACGCTGACC TGGGCGGATATCGGCGCGATCGGCTGGCTGGTCGACGGCGCCGCGATCATGAACCAGATTCCGCTGTGCCGCTGCTCCTA CGGCCCCTATGCGCGGGCGATGATCCGCGTCTGCAAGGAGGAGTCGTTCCACCAGCGCCAGGGCTACGAGATCATGCTGA CGCTGTGCCGCGGTTCGGCCGAGCAGAAGGCGATGGCGCAGGATGCGCTCGACCGCTGGTGGTGGCCATGCCTGATGATG TTCGGCCCGCCGGATCAGGCCAGCCAGCACAGCGACACCTCGACCAGATGGAAGATCAAGCGCTTCTCCAACGACGAATT GCGCCAGAAATTCGTCGATGCGACCGTGCCGCAGGCGCACTATCTCGGGCTCACGATTCCCGATCCGGCGTTGACCAGGA ACGAGTCCACCGGGCACTGGGACTACGGCACGATCGACTGGGACGAATTCAAGCAGGTGCTGGCCGGCAACGGCCCGTGC AACCGCGACCGGCTGGCGGCGCGGCGCAAGGCGCATGACGACGGCGCCTGGGTTCGCGAAGCCGCGATGGCCTTCGCCGA AAAGCGCAAGAAGAAGATCGCGGCCTAG
Upstream 100 bases:
>100_bases GGTCGTAGTCGTTCGCTCGCGTGCGAGCCATGCGATGCAACATCCTGCTTGGTGCGGCACGCCCGACACGAACCGCGGAT GACTGGTTCCGACACTTGCA
Downstream 100 bases:
>100_bases ACGCCGCGGGATTGTCCATCTTCGGGAGGCATTCGATGAGCACGCCGAATACGGCGCTGTGGGAAGTCTTCATCCGCAGC CGCAATGGCCTCGCGCACAA
Product: phenylacetate-CoA oxygenase subunit PaaA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 355; Mature: 354
Protein sequence:
>355_residues MTVQLVNYISNKAGPRARACEETAEDAAMYTQALNTTEAEDRNLEDAGRAALFQARIDAEERIEPNDWMPAAYRKTLTRQ ISQHAHSEIVGMLPEGNWITRAPTLRRKAALLAKVQDECGHGLYLYAAAETLGSSREELVDQMLSGKAKYSSIFNYPTLT WADIGAIGWLVDGAAIMNQIPLCRCSYGPYARAMIRVCKEESFHQRQGYEIMLTLCRGSAEQKAMAQDALDRWWWPCLMM FGPPDQASQHSDTSTRWKIKRFSNDELRQKFVDATVPQAHYLGLTIPDPALTRNESTGHWDYGTIDWDEFKQVLAGNGPC NRDRLAARRKAHDDGAWVREAAMAFAEKRKKKIAA
Sequences:
>Translated_355_residues MTVQLVNYISNKAGPRARACEETAEDAAMYTQALNTTEAEDRNLEDAGRAALFQARIDAEERIEPNDWMPAAYRKTLTRQ ISQHAHSEIVGMLPEGNWITRAPTLRRKAALLAKVQDECGHGLYLYAAAETLGSSREELVDQMLSGKAKYSSIFNYPTLT WADIGAIGWLVDGAAIMNQIPLCRCSYGPYARAMIRVCKEESFHQRQGYEIMLTLCRGSAEQKAMAQDALDRWWWPCLMM FGPPDQASQHSDTSTRWKIKRFSNDELRQKFVDATVPQAHYLGLTIPDPALTRNESTGHWDYGTIDWDEFKQVLAGNGPC NRDRLAARRKAHDDGAWVREAAMAFAEKRKKKIAA >Mature_354_residues TVQLVNYISNKAGPRARACEETAEDAAMYTQALNTTEAEDRNLEDAGRAALFQARIDAEERIEPNDWMPAAYRKTLTRQI SQHAHSEIVGMLPEGNWITRAPTLRRKAALLAKVQDECGHGLYLYAAAETLGSSREELVDQMLSGKAKYSSIFNYPTLTW ADIGAIGWLVDGAAIMNQIPLCRCSYGPYARAMIRVCKEESFHQRQGYEIMLTLCRGSAEQKAMAQDALDRWWWPCLMMF GPPDQASQHSDTSTRWKIKRFSNDELRQKFVDATVPQAHYLGLTIPDPALTRNESTGHWDYGTIDWDEFKQVLAGNGPCN RDRLAARRKAHDDGAWVREAAMAFAEKRKKKIAA
Specific function: May be part of a multicomponent oxygenase involved in phenylacetyl-CoA hydroxylation [H]
COG id: COG3396
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787654, Length=303, Percent_Identity=67.3267326732673, Blast_Score=443, Evalue=1e-126,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR011881 - InterPro: IPR007814 [H]
Pfam domain/function: PF05138 PaaA_PaaC [H]
EC number: NA
Molecular weight: Translated: 40052; Mature: 39920
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVQLVNYISNKAGPRARACEETAEDAAMYTQALNTTEAEDRNLEDAGRAALFQARIDAE CCEEHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHH ERIEPNDWMPAAYRKTLTRQISQHAHSEIVGMLPEGNWITRAPTLRRKAALLAKVQDECG HCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCEEECCCHHHHHHHHHHHHHHHCC HGLYLYAAAETLGSSREELVDQMLSGKAKYSSIFNYPTLTWADIGAIGWLVDGAAIMNQI CCEEEEEEHHHHCCCHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC PLCRCSYGPYARAMIRVCKEESFHQRQGYEIMLTLCRGSAEQKAMAQDALDRWWWPCLMM CCEECCCCHHHHHHHHHHHHHHHHHHCCCCEEHEECCCCHHHHHHHHHHHHHHHHHHHHH FGPPDQASQHSDTSTRWKIKRFSNDELRQKFVDATVPQAHYLGLTIPDPALTRNESTGHW CCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCHHEEEEECCCCCCCCCCCCCCC DYGTIDWDEFKQVLAGNGPCNRDRLAARRKAHDDGAWVREAAMAFAEKRKKKIAA CCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TVQLVNYISNKAGPRARACEETAEDAAMYTQALNTTEAEDRNLEDAGRAALFQARIDAE CEEHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHH ERIEPNDWMPAAYRKTLTRQISQHAHSEIVGMLPEGNWITRAPTLRRKAALLAKVQDECG HCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCEEECCCHHHHHHHHHHHHHHHCC HGLYLYAAAETLGSSREELVDQMLSGKAKYSSIFNYPTLTWADIGAIGWLVDGAAIMNQI CCEEEEEEHHHHCCCHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC PLCRCSYGPYARAMIRVCKEESFHQRQGYEIMLTLCRGSAEQKAMAQDALDRWWWPCLMM CCEECCCCHHHHHHHHHHHHHHHHHHCCCCEEHEECCCCHHHHHHHHHHHHHHHHHHHHH FGPPDQASQHSDTSTRWKIKRFSNDELRQKFVDATVPQAHYLGLTIPDPALTRNESTGHW CCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCHHEEEEECCCCCCCCCCCCCCC DYGTIDWDEFKQVLAGNGPCNRDRLAARRKAHDDGAWVREAAMAFAEKRKKKIAA CCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9748275; 9278503; 10766858 [H]