| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is paaC [H]
Identifier: 86750749
GI number: 86750749
Start: 4176384
End: 4177160
Strand: Reverse
Name: paaC [H]
Synonym: RPB_3639
Alternate gene names: 86750749
Gene position: 4177160-4176384 (Counterclockwise)
Preceding gene: 86750750
Following gene: 86750748
Centisome position: 78.35
GC content: 67.7
Gene sequence:
>777_bases ATGCCCGCCGCCTCGATCGAAATCACCGACACCCCGCTGTTCACCTACGCCCTGCGCCGCGCCGACGACGCGCTGATCCT CGGGCATCGGCTGTCGGAATGGTGCGGCCATGCGCCGATGCTCGAAGAGGACATGGCGCTGTCGAACATCGCGCTGGATC TGATCGGGCAGGCGCGCGAACTGTACAGCTATGCAGGGCGCGTCGAGGGCAGGGGGCGCGGCGAGGATCAGCTCGCTTAT CTGCGCGAGGAGCGCGATTACCAGAACCTCTTGCTCGTCGAGCAGCCCAACGGCGACTTCGCCCGCACCATCGCGCGGCA ATTGTTGTATTCCGCCTACGCCGATCCGTATTGGCGGGCGATGATGCGCTCGGCCGACCCGACGCTCGCCGCGATCGCGG CGAAGTCGGAAAAGGAAAGCGCCTATCACCTCCGCCACACGTCGGAATGGATGATCCGGCTCGGCGACGGCACCGACGAA AGCCATCGCCGCGCGCAGGACGCGATCGACGCGCTGTGGCCGTTCACGGGTGAGCTGTTCGAGGCCGACGATGGCGAGCG CAGCCTGATCGAGGCGGGCGTCGTGATCGATCCCGCGAGCCTGCGCGAGCCCTGGCAGGCAACGATCGCCGCCGTGCTGG GCGAAGCGACCTTGACGCTGCCGAGCGGCACGTGGGTGCAGCGCGGCGGCCGCAGCGGCCGGCACAGCGAGCATCTCGGC CATCTGCTCTCCGAGCTGCAATACATGCAGCGGACCTATCCGGGCCAGACATGGTGA
Upstream 100 bases:
>100_bases CCGGTACCCGTCGCCGCATCCTTCGAGGCTCGCTGCGCTCCCACCTCAGGATGACGCCGCGTGTGTGGCGAACGCTTCAT TCGAACCCGAGTAACAGCCG
Downstream 100 bases:
>100_bases CGCGCGCCATCAGCGATTCCGAGCTGCGCGCCCGCGCCTGGGATGCGGCCGCGACCGTGGTCGATCCGGAGATTCCCGTC CTCACCATCGCCGATCTCGG
Product: phenylacetate-CoA oxygenase, PaaI subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MPAASIEITDTPLFTYALRRADDALILGHRLSEWCGHAPMLEEDMALSNIALDLIGQARELYSYAGRVEGRGRGEDQLAY LREERDYQNLLLVEQPNGDFARTIARQLLYSAYADPYWRAMMRSADPTLAAIAAKSEKESAYHLRHTSEWMIRLGDGTDE SHRRAQDAIDALWPFTGELFEADDGERSLIEAGVVIDPASLREPWQATIAAVLGEATLTLPSGTWVQRGGRSGRHSEHLG HLLSELQYMQRTYPGQTW
Sequences:
>Translated_258_residues MPAASIEITDTPLFTYALRRADDALILGHRLSEWCGHAPMLEEDMALSNIALDLIGQARELYSYAGRVEGRGRGEDQLAY LREERDYQNLLLVEQPNGDFARTIARQLLYSAYADPYWRAMMRSADPTLAAIAAKSEKESAYHLRHTSEWMIRLGDGTDE SHRRAQDAIDALWPFTGELFEADDGERSLIEAGVVIDPASLREPWQATIAAVLGEATLTLPSGTWVQRGGRSGRHSEHLG HLLSELQYMQRTYPGQTW >Mature_257_residues PAASIEITDTPLFTYALRRADDALILGHRLSEWCGHAPMLEEDMALSNIALDLIGQARELYSYAGRVEGRGRGEDQLAYL REERDYQNLLLVEQPNGDFARTIARQLLYSAYADPYWRAMMRSADPTLAAIAAKSEKESAYHLRHTSEWMIRLGDGTDES HRRAQDAIDALWPFTGELFEADDGERSLIEAGVVIDPASLREPWQATIAAVLGEATLTLPSGTWVQRGGRSGRHSEHLGH LLSELQYMQRTYPGQTW
Specific function: May be part of a multicomponent oxygenase involved in phenylacetyl-CoA hydroxylation [H]
COG id: COG3396
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787656, Length=246, Percent_Identity=52.4390243902439, Blast_Score=262, Evalue=2e-71,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR011882 - InterPro: IPR007814 [H]
Pfam domain/function: PF05138 PaaA_PaaC [H]
EC number: NA
Molecular weight: Translated: 28975; Mature: 28844
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAASIEITDTPLFTYALRRADDALILGHRLSEWCGHAPMLEEDMALSNIALDLIGQARE CCCCCEEECCCHHHHHHHHHCCCCEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH LYSYAGRVEGRGRGEDQLAYLREERDYQNLLLVEQPNGDFARTIARQLLYSAYADPYWRA HHHHHCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCHHHHH MMRSADPTLAAIAAKSEKESAYHLRHTSEWMIRLGDGTDESHRRAQDAIDALWPFTGELF HHHCCCCHHHHHHHCCCCCHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCC EADDGERSLIEAGVVIDPASLREPWQATIAAVLGEATLTLPSGTWVQRGGRSGRHSEHLG CCCCCCHHHHHCCCEECCHHHCCHHHHHHHHHHCCCEEECCCCHHHHCCCCCCCHHHHHH HLLSELQYMQRTYPGQTW HHHHHHHHHHHCCCCCCC >Mature Secondary Structure PAASIEITDTPLFTYALRRADDALILGHRLSEWCGHAPMLEEDMALSNIALDLIGQARE CCCCEEECCCHHHHHHHHHCCCCEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH LYSYAGRVEGRGRGEDQLAYLREERDYQNLLLVEQPNGDFARTIARQLLYSAYADPYWRA HHHHHCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCHHHHH MMRSADPTLAAIAAKSEKESAYHLRHTSEWMIRLGDGTDESHRRAQDAIDALWPFTGELF HHHCCCCHHHHHHHCCCCCHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCC EADDGERSLIEAGVVIDPASLREPWQATIAAVLGEATLTLPSGTWVQRGGRSGRHSEHLG CCCCCCHHHHHCCCEECCHHHCCHHHHHHHHHHCCCEEECCCCHHHHCCCCCCCHHHHHH HLLSELQYMQRTYPGQTW HHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9748275; 9278503; 10766858 [H]