| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is livK [C]
Identifier: 86750676
GI number: 86750676
Start: 4086879
End: 4088114
Strand: Direct
Name: livK [C]
Synonym: RPB_3566
Alternate gene names: 86750676
Gene position: 4086879-4088114 (Clockwise)
Preceding gene: 86750668
Following gene: 86750677
Centisome position: 76.65
GC content: 62.54
Gene sequence:
>1236_bases ATGTCGGCCCTCTCCCGTTCGATCGCCACCCTGGCGGCCGCCGCCCTGCTGTCCGCAGCCGCCGGACAGGCGATGGCGCA GAAGAAATATGGCCCCGGCGCCAGCGACACCGAAGTCAAGATCGGCAACATCGTGCCTTACTCGGGCCCGGCGTCGGCCT ATGGCAGCGTCGGCAAGGCGCAAGAAGCCTATTTCAAGATGATCAACGACAAGGGCGGCATCAACGGCCGCAAGATCGTC TACATCTCCAACGACGACGCCTATTCGCCGCCGAAATCGGTCGAGCAGACCCGTAAGCTGGTCGAGAGCGACGAGGTGCT GTTCATGTTCAGCCCGCTCGGCACGCCGTCCAACACCGCGATCCAGAAATATCTCAACGCCAAGAAAGTGCCGCATCTGT TCCTGGCGTCGGGCGCCACCAAGTGGAACGATCCGAAGCACTTTCCGTGGACGATGGGCTGGCTGCCGAGCTACCAGAGC GAAGGCCGGATCTACGCCAAGTATCTGATGAAGGAGAAGCCGGACGCCAAGATCGCCGTGCTGTATCAGGGCGACGATTT CGGCAAGGACTATCTCAAGGGCCTCAAGGACGGCCTCGGCGCCAAGGCTTCGCAGGTGGTGATCGAGGACAGCTACGAGC TGACCGAGCCGACCGTCGATTCCCACATCGTCAAAATCAAGGCCGCCAATCCCGACGTGCTGGTGATCTTCGCCACGCCG AAATTCGCGGCGCAGACCATCAAGAAGGTCGCCGAACTGGCGTGGAAGCCGATGATGATCGTGCCGAACGTCTCGGCCTC GACCGGCAGCGTGATGAAGCCCGCCGGCTTCGAGAACGCCCAGGGCATCGTCTCCGCCTCCTACGCCAAGGACGCCACCG ACAAGCAGTGGGAAAACGACCCCGGCATGAAGGCGTATTACGAGTTCATGGAGAAGTATGCGCCGCAGGCCAGCCGCGCT GACTCATCGTTCATGACCGGCTACAACATCGCCGAGACGGTCGCGGTGCTGATCAAGCAATGCGGCGACGATCTGTCCCG CGAGAACGTCATGAAGCAGGCGGCCAACCTCAAGGACGTCCAGCTCGGCGGCCTGCTGCCGGGCATCAAGCTCAACACCA GCGCGACCGACTTCGCGCCGATCGAACAGCTGCAGCTGATGAAGTTCCAGGGCGAGAACTGGAAGCTGTTCGGCGACGTG ATCGAGGGCGAAGTCGCCGCGCCGACCGGCGGCTAG
Upstream 100 bases:
>100_bases GGGTTGAGCAACGCCCGCGAACCGGCTAACCCATTCCCGCACTGCTGCACTGCAGAGCAGCGCCTGCAGCAAGACCAACA ACAACCAACGAGGAATCCAG
Downstream 100 bases:
>100_bases TTCAGCCTCCAACGTTTAGACATCGAGCCCTCCGCCGCGGCGGGGGGCTTTTTCTTTCTTCCTTCTCCCCTTGTGGGAGA AGGTGGCGCCGACGCAGTCC
Product: extracellular ligand-binding receptor
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 411; Mature: 410
Protein sequence:
>411_residues MSALSRSIATLAAAALLSAAAGQAMAQKKYGPGASDTEVKIGNIVPYSGPASAYGSVGKAQEAYFKMINDKGGINGRKIV YISNDDAYSPPKSVEQTRKLVESDEVLFMFSPLGTPSNTAIQKYLNAKKVPHLFLASGATKWNDPKHFPWTMGWLPSYQS EGRIYAKYLMKEKPDAKIAVLYQGDDFGKDYLKGLKDGLGAKASQVVIEDSYELTEPTVDSHIVKIKAANPDVLVIFATP KFAAQTIKKVAELAWKPMMIVPNVSASTGSVMKPAGFENAQGIVSASYAKDATDKQWENDPGMKAYYEFMEKYAPQASRA DSSFMTGYNIAETVAVLIKQCGDDLSRENVMKQAANLKDVQLGGLLPGIKLNTSATDFAPIEQLQLMKFQGENWKLFGDV IEGEVAAPTGG
Sequences:
>Translated_411_residues MSALSRSIATLAAAALLSAAAGQAMAQKKYGPGASDTEVKIGNIVPYSGPASAYGSVGKAQEAYFKMINDKGGINGRKIV YISNDDAYSPPKSVEQTRKLVESDEVLFMFSPLGTPSNTAIQKYLNAKKVPHLFLASGATKWNDPKHFPWTMGWLPSYQS EGRIYAKYLMKEKPDAKIAVLYQGDDFGKDYLKGLKDGLGAKASQVVIEDSYELTEPTVDSHIVKIKAANPDVLVIFATP KFAAQTIKKVAELAWKPMMIVPNVSASTGSVMKPAGFENAQGIVSASYAKDATDKQWENDPGMKAYYEFMEKYAPQASRA DSSFMTGYNIAETVAVLIKQCGDDLSRENVMKQAANLKDVQLGGLLPGIKLNTSATDFAPIEQLQLMKFQGENWKLFGDV IEGEVAAPTGG >Mature_410_residues SALSRSIATLAAAALLSAAAGQAMAQKKYGPGASDTEVKIGNIVPYSGPASAYGSVGKAQEAYFKMINDKGGINGRKIVY ISNDDAYSPPKSVEQTRKLVESDEVLFMFSPLGTPSNTAIQKYLNAKKVPHLFLASGATKWNDPKHFPWTMGWLPSYQSE GRIYAKYLMKEKPDAKIAVLYQGDDFGKDYLKGLKDGLGAKASQVVIEDSYELTEPTVDSHIVKIKAANPDVLVIFATPK FAAQTIKKVAELAWKPMMIVPNVSASTGSVMKPAGFENAQGIVSASYAKDATDKQWENDPGMKAYYEFMEKYAPQASRAD SSFMTGYNIAETVAVLIKQCGDDLSRENVMKQAANLKDVQLGGLLPGIKLNTSATDFAPIEQLQLMKFQGENWKLFGDVI EGEVAAPTGG
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI1789867, Length=237, Percent_Identity=26.5822784810127, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 44433; Mature: 44302
Theoretical pI: Translated: 8.26; Mature: 8.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSALSRSIATLAAAALLSAAAGQAMAQKKYGPGASDTEVKIGNIVPYSGPASAYGSVGKA CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCEECCCCCCHHHCCCCHH QEAYFKMINDKGGINGRKIVYISNDDAYSPPKSVEQTRKLVESDEVLFMFSPLGTPSNTA HHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCHHH IQKYLNAKKVPHLFLASGATKWNDPKHFPWTMGWLPSYQSEGRIYAKYLMKEKPDAKIAV HHHHHHHHCCCEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCEEEHHHHCCCCCCEEEE LYQGDDFGKDYLKGLKDGLGAKASQVVIEDSYELTEPTVDSHIVKIKAANPDVLVIFATP EECCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCEEEEEEECCCCEEEEEECC KFAAQTIKKVAELAWKPMMIVPNVSASTGSVMKPAGFENAQGIVSASYAKDATDKQWEND HHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEHHHCCCCCCCCCCC PGMKAYYEFMEKYAPQASRADSSFMTGYNIAETVAVLIKQCGDDLSRENVMKQAANLKDV CCHHHHHHHHHHHCCCCCCCCCHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEE QLGGLLPGIKLNTSATDFAPIEQLQLMKFQGENWKLFGDVIEGEVAAPTGG ECCCCCCCCEECCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCEECCCCCC >Mature Secondary Structure SALSRSIATLAAAALLSAAAGQAMAQKKYGPGASDTEVKIGNIVPYSGPASAYGSVGKA CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCEECCCCCCHHHCCCCHH QEAYFKMINDKGGINGRKIVYISNDDAYSPPKSVEQTRKLVESDEVLFMFSPLGTPSNTA HHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCHHH IQKYLNAKKVPHLFLASGATKWNDPKHFPWTMGWLPSYQSEGRIYAKYLMKEKPDAKIAV HHHHHHHHCCCEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCEEEHHHHCCCCCCEEEE LYQGDDFGKDYLKGLKDGLGAKASQVVIEDSYELTEPTVDSHIVKIKAANPDVLVIFATP EECCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCEEEEEEECCCCEEEEEECC KFAAQTIKKVAELAWKPMMIVPNVSASTGSVMKPAGFENAQGIVSASYAKDATDKQWEND HHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEHHHCCCCCCCCCCC PGMKAYYEFMEKYAPQASRADSSFMTGYNIAETVAVLIKQCGDDLSRENVMKQAANLKDV CCHHHHHHHHHHHCCCCCCCCCHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEE QLGGLLPGIKLNTSATDFAPIEQLQLMKFQGENWKLFGDVIEGEVAAPTGG ECCCCCCCCEECCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA