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The map label for this gene is bepC [H]

Identifier: 86750668

GI number: 86750668

Start: 4071544

End: 4072962

Strand: Direct

Name: bepC [H]

Synonym: RPB_3558

Alternate gene names: 86750668

Gene position: 4071544-4072962 (Clockwise)

Preceding gene: 86750667

Following gene: 86750676

Centisome position: 76.37

GC content: 67.16

Gene sequence:

>1419_bases
ATGGCTTGGTCGTCAGGATTGATTAGCAGCGCCGGTACGACGGCACGTCGTTCGCTTGCGGGCGTTTGCGCCGCCGCGAT
CAGCCTTGCGCTGACCTTTCCGGTATCCGCCGAGGGACTCCCCGAAGCGCTCGCGAAAGCCTATCAGACCAATCCGCAAT
TGAATGCCGAGCGCGCCCGGCAGCGCGCGACCGACGAGAATGTGCCGGCCGCCCTGTCGGGTTATCGGCCGCAGATCATC
GCAAGTCTCGGCGTCGGTATGCAGGCGGTGCGGAACCTGCTGCCCGACAACACCATCCAGACCGCAACGCTGAAGCCGTG
GACGATCGGCGTGACCGTCACGCAGAACCTGTTCAACGGTTTCAGGACAGCCAACAGTGTGCGCGTCGCCGAATTTCAGG
TGAAGTCCGGCCGCGAAGCGTTGCGCAATGTCGGACAGGGCGTGTTGCTCGACGCGGTCACCGCCTACACCAACGTGCTC
GCCAACCAGGCCTTGGTTGCGGCCCAGAAGACCAACGTCGATTTTCTCAGCCAGACGCTGGACATCACCAACAAGCGATT
GAACGCCGGCGATGTGACGCCGACCGACACCGCGCAGGCCGAAGCGCGGCTCAGCCGCGGCCGCGCCGATCTCAACGCCG
CCGAAGTGAACCTCGCCGTCAGCGAGGCCACCTACGCGCAGGTGATCGGCAATCCGCCGTCGCGGCTCAGCCCAGCCGCG
CCGGTCGACCGGCTGCTGCCTCGCAGCCGTGAGGAAGCGATCGCGCTGGCGCTGCAAGGCAATCCCGCAGTGCTGGCGGC
GAGCTACGACGTCGACGTCGCCACCACGACGATCAAGGTCGCCGAAGGCAGCCTGCTGCCGAGCGTGACGCTGCAAGGCA
ACGCCAGTCGCAGCCGGGACACCGATTCGACGCTCGGCACCAAAGGCACCGACCAGGCTTCGATCCTCGGCCAGGTCTCC
GCGCCGATCTACGACGGCGGACTCGCCGCCGCGGAGACCCGGCAGTCCAAGGAGATCGCGGCGCAGAGCCGTCTGGTGCT
CGATCAGATCCGCAATCAGTCGCGCACCGCGGCGGTCGGCGCGTGGGTCAGCAATGAGGGCGCCAAGATCGCCGTCAGCG
CGTCGGAAGCCGAAGTGCGCGCCGCCGAGATCGCGCTGAAAGGCGTCGGCCGCGAAGCGCAAGGCGGCCAGCGCACCACG
GTCGACGTGCTGAATTCGCAGCAGGACCTCACGCTCGCCCGCGCGCGCCTGATCGGCGCGCAGCGCGATCGGGTGATCGC
GTCCTACACGCTGCTCAGCGCCATCGGCCGTCTCGACGTCAAGACGCTGAAGCTCAATACGCCGGACTATCTGCCGGATG
TTCACTACCATCAGGTCCGCGACGCCTGGCACGGCCTGCGCACGCCGTCGGGTCAGTGA

Upstream 100 bases:

>100_bases
CGCCGTCCGCGCGCCTCGATGATTTGCGTCACACTGCAGCGCGTTCTAAAACTGCGGTGATGTCAGCGGGGGCGGATGTC
GAAGGGTTGTTGCGGAACAA

Downstream 100 bases:

>100_bases
CGCCGGCCGCGATCCGCCGGACGCGCCCGCAACCGCCGACATCACCCCGGTGCCTAACGCGCGTGTGGCGGCCTTGCCGG
GTCGATCAGGTCGGTGCGCC

Product: Type I secretion outer membrane protein, TolC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 472; Mature: 471

Protein sequence:

>472_residues
MAWSSGLISSAGTTARRSLAGVCAAAISLALTFPVSAEGLPEALAKAYQTNPQLNAERARQRATDENVPAALSGYRPQII
ASLGVGMQAVRNLLPDNTIQTATLKPWTIGVTVTQNLFNGFRTANSVRVAEFQVKSGREALRNVGQGVLLDAVTAYTNVL
ANQALVAAQKTNVDFLSQTLDITNKRLNAGDVTPTDTAQAEARLSRGRADLNAAEVNLAVSEATYAQVIGNPPSRLSPAA
PVDRLLPRSREEAIALALQGNPAVLAASYDVDVATTTIKVAEGSLLPSVTLQGNASRSRDTDSTLGTKGTDQASILGQVS
APIYDGGLAAAETRQSKEIAAQSRLVLDQIRNQSRTAAVGAWVSNEGAKIAVSASEAEVRAAEIALKGVGREAQGGQRTT
VDVLNSQQDLTLARARLIGAQRDRVIASYTLLSAIGRLDVKTLKLNTPDYLPDVHYHQVRDAWHGLRTPSGQ

Sequences:

>Translated_472_residues
MAWSSGLISSAGTTARRSLAGVCAAAISLALTFPVSAEGLPEALAKAYQTNPQLNAERARQRATDENVPAALSGYRPQII
ASLGVGMQAVRNLLPDNTIQTATLKPWTIGVTVTQNLFNGFRTANSVRVAEFQVKSGREALRNVGQGVLLDAVTAYTNVL
ANQALVAAQKTNVDFLSQTLDITNKRLNAGDVTPTDTAQAEARLSRGRADLNAAEVNLAVSEATYAQVIGNPPSRLSPAA
PVDRLLPRSREEAIALALQGNPAVLAASYDVDVATTTIKVAEGSLLPSVTLQGNASRSRDTDSTLGTKGTDQASILGQVS
APIYDGGLAAAETRQSKEIAAQSRLVLDQIRNQSRTAAVGAWVSNEGAKIAVSASEAEVRAAEIALKGVGREAQGGQRTT
VDVLNSQQDLTLARARLIGAQRDRVIASYTLLSAIGRLDVKTLKLNTPDYLPDVHYHQVRDAWHGLRTPSGQ
>Mature_471_residues
AWSSGLISSAGTTARRSLAGVCAAAISLALTFPVSAEGLPEALAKAYQTNPQLNAERARQRATDENVPAALSGYRPQIIA
SLGVGMQAVRNLLPDNTIQTATLKPWTIGVTVTQNLFNGFRTANSVRVAEFQVKSGREALRNVGQGVLLDAVTAYTNVLA
NQALVAAQKTNVDFLSQTLDITNKRLNAGDVTPTDTAQAEARLSRGRADLNAAEVNLAVSEATYAQVIGNPPSRLSPAAP
VDRLLPRSREEAIALALQGNPAVLAASYDVDVATTTIKVAEGSLLPSVTLQGNASRSRDTDSTLGTKGTDQASILGQVSA
PIYDGGLAAAETRQSKEIAAQSRLVLDQIRNQSRTAAVGAWVSNEGAKIAVSASEAEVRAAEIALKGVGREAQGGQRTTV
DVLNSQQDLTLARARLIGAQRDRVIASYTLLSAIGRLDVKTLKLNTPDYLPDVHYHQVRDAWHGLRTPSGQ

Specific function: Involved in the efflux of toxic and relatively hydrophobic compounds. Influences survival inside the host [H]

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cell outer membrane (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]

Homologues:

Organism=Escherichia coli, GI87082199, Length=440, Percent_Identity=25, Blast_Score=66, Evalue=4e-12,

Paralogues:

None

Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003423
- InterPro:   IPR010130 [H]

Pfam domain/function: PF02321 OEP [H]

EC number: NA

Molecular weight: Translated: 49741; Mature: 49610

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.2 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAWSSGLISSAGTTARRSLAGVCAAAISLALTFPVSAEGLPEALAKAYQTNPQLNAERAR
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHH
QRATDENVPAALSGYRPQIIASLGVGMQAVRNLLPDNTIQTATLKPWTIGVTVTQNLFNG
HHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEEEHHHHHHH
FRTANSVRVAEFQVKSGREALRNVGQGVLLDAVTAYTNVLANQALVAAQKTNVDFLSQTL
HHCCCCEEEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEEHHCCHHHHHHHH
DITNKRLNAGDVTPTDTAQAEARLSRGRADLNAAEVNLAVSEATYAQVIGNPPSRLSPAA
HHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHEEEEEECHHHHHHHHCCCCCCCCCCC
PVDRLLPRSREEAIALALQGNPAVLAASYDVDVATTTIKVAEGSLLPSVTLQGNASRSRD
CHHHHCCCCCCCEEEEEECCCCEEEEEECCCEEEEEEEEEECCCCCCEEEECCCCCCCCC
TDSTLGTKGTDQASILGQVSAPIYDGGLAAAETRQSKEIAAQSRLVLDQIRNQSRTAAVG
CCCCCCCCCCCHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
AWVSNEGAKIAVSASEAEVRAAEIALKGVGREAQGGQRTTVDVLNSQQDLTLARARLIGA
EEECCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCEEHHHHCCCCHHHHHHHHHHCC
QRDRVIASYTLLSAIGRLDVKTLKLNTPDYLPDVHYHQVRDAWHGLRTPSGQ
CCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
AWSSGLISSAGTTARRSLAGVCAAAISLALTFPVSAEGLPEALAKAYQTNPQLNAERAR
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHH
QRATDENVPAALSGYRPQIIASLGVGMQAVRNLLPDNTIQTATLKPWTIGVTVTQNLFNG
HHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEEEHHHHHHH
FRTANSVRVAEFQVKSGREALRNVGQGVLLDAVTAYTNVLANQALVAAQKTNVDFLSQTL
HHCCCCEEEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEEHHCCHHHHHHHH
DITNKRLNAGDVTPTDTAQAEARLSRGRADLNAAEVNLAVSEATYAQVIGNPPSRLSPAA
HHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHEEEEEECHHHHHHHHCCCCCCCCCCC
PVDRLLPRSREEAIALALQGNPAVLAASYDVDVATTTIKVAEGSLLPSVTLQGNASRSRD
CHHHHCCCCCCCEEEEEECCCCEEEEEECCCEEEEEEEEEECCCCCCEEEECCCCCCCCC
TDSTLGTKGTDQASILGQVSAPIYDGGLAAAETRQSKEIAAQSRLVLDQIRNQSRTAAVG
CCCCCCCCCCCHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
AWVSNEGAKIAVSASEAEVRAAEIALKGVGREAQGGQRTTVDVLNSQQDLTLARARLIGA
EEECCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCEEHHHHCCCCHHHHHHHHHHCC
QRDRVIASYTLLSAIGRLDVKTLKLNTPDYLPDVHYHQVRDAWHGLRTPSGQ
CCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12271122 [H]