Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

Click here to switch to the map view.

The map label for this gene is 86750647

Identifier: 86750647

GI number: 86750647

Start: 4048742

End: 4049206

Strand: Direct

Name: 86750647

Synonym: RPB_3537

Alternate gene names: NA

Gene position: 4048742-4049206 (Clockwise)

Preceding gene: 86750646

Following gene: 86750648

Centisome position: 75.94

GC content: 68.82

Gene sequence:

>465_bases
ATGACCGCGACCGGCAAAGCGGTGCTCACCGGCGGCTGCCAGTGCGGCGCGATCCGCTACGCGCTGTCGGCGCCGCCGCT
GCGGATCACCTTGTGCCATTGCCGGATGTGCCAGAAGGCCACCGGCGCGCCGTTCGCCTCGATGGCCGAAGTCGCGCGCG
AGCACTTCGCCTGGACCCGCGGCCAGCCGGCGTCGTTCCGCTCGTCATCGCTGGCGGAGCGCGATTTCTGCAACGCCTGC
GGCACGCCGCTGAGCTATCGGCAGAACGAAGGAACCAGCATCGAGATCATGACCGGCACCTTCGACCGGCCCGACCGCGT
GGTGCCGACGGTGCAACTCGGCGCCGAGTCGCGGCTCGGCTGGGTCGGCGCGATCGCGAACCTGCCGAGCAAGACGACCA
CGCAGATCTACGGACCCGAGAAGCTGGCGCAGGTGTTCAGCTATCAGCAGCCGGATCACGATTGA

Upstream 100 bases:

>100_bases
TGGAAGCGAGCCTGCGCGAGGCCGGCGTACACGACTTCATCTTCGCCGGCGGCGATGCGCTGGCGATGCTGAACGACGCC
TGGCAGCGAATCGAGGCGGC

Downstream 100 bases:

>100_bases
ACCCGACGAAATGACGCCCAACAGCGGCCGTGCTAAAATGAGCCGCGCAGAGATTGAGCCAATGAGCAAGATTCCGAACT
TCGCCGAGATCGCGTTCCAG

Product: glutathione-dependent formaldehyde-activating, GFA

Products: NA

Alternate protein names: Glutathione-Dependent Formaldehyde-Activating Protein; Glutathione-Dependent Formaldehyde-Activating; Glutathione-Dependent Formaldehyde-Activating Family; Glutathione-Dependent Formaldehyde-Activating Protein GFA; Glutathione-Dependent Formaldehyde-Activating Gfa

Number of amino acids: Translated: 154; Mature: 153

Protein sequence:

>154_residues
MTATGKAVLTGGCQCGAIRYALSAPPLRITLCHCRMCQKATGAPFASMAEVAREHFAWTRGQPASFRSSSLAERDFCNAC
GTPLSYRQNEGTSIEIMTGTFDRPDRVVPTVQLGAESRLGWVGAIANLPSKTTTQIYGPEKLAQVFSYQQPDHD

Sequences:

>Translated_154_residues
MTATGKAVLTGGCQCGAIRYALSAPPLRITLCHCRMCQKATGAPFASMAEVAREHFAWTRGQPASFRSSSLAERDFCNAC
GTPLSYRQNEGTSIEIMTGTFDRPDRVVPTVQLGAESRLGWVGAIANLPSKTTTQIYGPEKLAQVFSYQQPDHD
>Mature_153_residues
TATGKAVLTGGCQCGAIRYALSAPPLRITLCHCRMCQKATGAPFASMAEVAREHFAWTRGQPASFRSSSLAERDFCNACG
TPLSYRQNEGTSIEIMTGTFDRPDRVVPTVQLGAESRLGWVGAIANLPSKTTTQIYGPEKLAQVFSYQQPDHD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16660; Mature: 16529

Theoretical pI: Translated: 8.28; Mature: 8.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
4.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTATGKAVLTGGCQCGAIRYALSAPPLRITLCHCRMCQKATGAPFASMAEVAREHFAWTR
CCCCCCEEEECCCCCCEEEEECCCCCEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC
GQPASFRSSSLAERDFCNACGTPLSYRQNEGTSIEIMTGTFDRPDRVVPTVQLGAESRLG
CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCCC
WVGAIANLPSKTTTQIYGPEKLAQVFSYQQPDHD
HHHHHHCCCCCCCEEEECHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TATGKAVLTGGCQCGAIRYALSAPPLRITLCHCRMCQKATGAPFASMAEVAREHFAWTR
CCCCCEEEECCCCCCEEEEECCCCCEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC
GQPASFRSSSLAERDFCNACGTPLSYRQNEGTSIEIMTGTFDRPDRVVPTVQLGAESRLG
CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCCC
WVGAIANLPSKTTTQIYGPEKLAQVFSYQQPDHD
HHHHHHCCCCCCCEEEECHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA