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The map label for this gene is pqqE [H]

Identifier: 86750530

GI number: 86750530

Start: 3908164

End: 3909408

Strand: Reverse

Name: pqqE [H]

Synonym: RPB_3419

Alternate gene names: 86750530

Gene position: 3909408-3908164 (Counterclockwise)

Preceding gene: 86750531

Following gene: 86750527

Centisome position: 73.32

GC content: 67.07

Gene sequence:

>1245_bases
ATGAGCGCCGCGAGGAACGAGACGATTCACGCTGCCGACGGCGTCGCCGTGCTGGAGTCGCGCGGCTCGGTCGCGGAGAA
TTTCGGCATTCCGCTCGCGGTGCTGCTGGAGCTGACGCATCGCTGTCCGCTGCAATGTCCGTACTGCTCGAATCCCGTGG
AGCTCGAGCGCGGCGGCGCCGAACTCACGACCGACGAGTGGAAGCGCGTGCTCGGCGAACTCGCCGCCATCGGCGTGCTG
CAGGTGCATTTTTCCGGCGGCGAGCCGACCGCGCGCAAGGACCTCGTCGAGCTGGTGCGACACGCCAGCGACGTCGGGCT
GTACACCAATCTGATCACCTCGGCGGTGCTGCTGACGCGCGAGCGCCTCGCGGCGCTGGCCGATGCCGGGCTGTGCCATG
TCCAGATCAGCTTTCAGGGCTACGAACCTGTCGTTGCCGATCGCGTCGCCGGATTCGCGAACGGCCATGCGAAGAAGATC
GAAGCCGCCCGCTGGACCCGCGAACTCGATCTGCCGCTCACCGTCAATGCGGTGATGCACCGCCAGAACCTGCATCAATT
GCCGGACATCATCGACATGGCGGTGGCACTCGACGCCGACCGGCTCGAAGTCGCCAATGTGCAGTATTACGGCTGGGCGC
TGAAGAACCGCGCCGCGCTGATGCCGACGCTGCAGCAGATCGATGACTGCACCGCGATCGTGGAGGCCGCGCAGTCGCGG
CTGAAGGGGCAGCTCGCGATCGACTACGTCGTGCCGGATTACTACGCGCTGCGGCCGAAGACGTGCATGGGCGGCTGGGG
CCGGCAGTTCTTCAACATCTCGCCGAGCGGCAAGGTGCTGCCGTGCCACGCCGCCGAGACCATCACCGGGCTCGCCTTCG
ACTCGGTGCGTGGAGGCGCGTCGATCGCCGAGATCTGGCGCAATTCCGAGGCGCTGAACCGCTATCGCGGCACCTCGTGG
ATGCAGCAGCCCTGTGCGAGCTGCGCCTTCAAGGAGATCGATTTCGGCGGCTGCCGCTGCCAGGCCTTCGCGCTCGCCGG
CGACGCCGCCGCGACCGATCCGGCCTGTGCACTGTCGCCGCTGCACAAGCGGATCTTCAAGACTGCGGAAGCAGAGGCGG
AAGCCGGGGGCGACAAATTCGTGTATCGCAATTTCGCCGGCGGCACGGCGGAGGGTCGTAGCACCACCTCACCACGTCAT
TCCGGGGCGCGCACAGCGCGAACCCGGAATCTCGCGGTGCCATGA

Upstream 100 bases:

>100_bases
AATACACCGCCGACCGCGCCGAAATCGGCGCCGACGTGATCGCGATGCTGCAGGACCTCGCCGACAAGGGATTCCTCACC
GAGGCGCGTGAGAAGACGCC

Downstream 100 bases:

>100_bases
ACCTCGGGATTCCGGGTTCGCTCACTATCGTGAGCGCCCCGGAATGACGGCGGAAAAGTCTAGAACACCACCACCGACCG
GATCGACTTGCCCTCGTGCA

Product: pyrroloquinoline quinone biosynthesis protein PqqE

Products: NA

Alternate protein names: Pyrroloquinoline quinone biosynthesis protein E [H]

Number of amino acids: Translated: 414; Mature: 413

Protein sequence:

>414_residues
MSAARNETIHAADGVAVLESRGSVAENFGIPLAVLLELTHRCPLQCPYCSNPVELERGGAELTTDEWKRVLGELAAIGVL
QVHFSGGEPTARKDLVELVRHASDVGLYTNLITSAVLLTRERLAALADAGLCHVQISFQGYEPVVADRVAGFANGHAKKI
EAARWTRELDLPLTVNAVMHRQNLHQLPDIIDMAVALDADRLEVANVQYYGWALKNRAALMPTLQQIDDCTAIVEAAQSR
LKGQLAIDYVVPDYYALRPKTCMGGWGRQFFNISPSGKVLPCHAAETITGLAFDSVRGGASIAEIWRNSEALNRYRGTSW
MQQPCASCAFKEIDFGGCRCQAFALAGDAAATDPACALSPLHKRIFKTAEAEAEAGGDKFVYRNFAGGTAEGRSTTSPRH
SGARTARTRNLAVP

Sequences:

>Translated_414_residues
MSAARNETIHAADGVAVLESRGSVAENFGIPLAVLLELTHRCPLQCPYCSNPVELERGGAELTTDEWKRVLGELAAIGVL
QVHFSGGEPTARKDLVELVRHASDVGLYTNLITSAVLLTRERLAALADAGLCHVQISFQGYEPVVADRVAGFANGHAKKI
EAARWTRELDLPLTVNAVMHRQNLHQLPDIIDMAVALDADRLEVANVQYYGWALKNRAALMPTLQQIDDCTAIVEAAQSR
LKGQLAIDYVVPDYYALRPKTCMGGWGRQFFNISPSGKVLPCHAAETITGLAFDSVRGGASIAEIWRNSEALNRYRGTSW
MQQPCASCAFKEIDFGGCRCQAFALAGDAAATDPACALSPLHKRIFKTAEAEAEAGGDKFVYRNFAGGTAEGRSTTSPRH
SGARTARTRNLAVP
>Mature_413_residues
SAARNETIHAADGVAVLESRGSVAENFGIPLAVLLELTHRCPLQCPYCSNPVELERGGAELTTDEWKRVLGELAAIGVLQ
VHFSGGEPTARKDLVELVRHASDVGLYTNLITSAVLLTRERLAALADAGLCHVQISFQGYEPVVADRVAGFANGHAKKIE
AARWTRELDLPLTVNAVMHRQNLHQLPDIIDMAVALDADRLEVANVQYYGWALKNRAALMPTLQQIDDCTAIVEAAQSRL
KGQLAIDYVVPDYYALRPKTCMGGWGRQFFNISPSGKVLPCHAAETITGLAFDSVRGGASIAEIWRNSEALNRYRGTSWM
QQPCASCAFKEIDFGGCRCQAFALAGDAAATDPACALSPLHKRIFKTAEAEAEAGGDKFVYRNFAGGTAEGRSTTSPRHS
GARTARTRNLAVP

Specific function: Together With Moac, Is Involved In The Conversion Of A Guanosine Derivative (Gxp) Into Molybdopterin Precursor Z. [C]

COG id: COG0535

COG function: function code R; Predicted Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily. PqqE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR000385
- InterPro:   IPR017200
- InterPro:   IPR011843
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 44746; Mature: 44615

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: PS01305 MOAA_NIFB_PQQE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAARNETIHAADGVAVLESRGSVAENFGIPLAVLLELTHRCPLQCPYCSNPVELERGGA
CCCCCCCCEECCCCCCEECCCCCHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCEECCCCC
ELTTDEWKRVLGELAAIGVLQVHFSGGEPTARKDLVELVRHASDVGLYTNLITSAVLLTR
CCCHHHHHHHHHHHHHEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERLAALADAGLCHVQISFQGYEPVVADRVAGFANGHAKKIEAARWTRELDLPLTVNAVMH
HHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEHHHHHH
RQNLHQLPDIIDMAVALDADRLEVANVQYYGWALKNRAALMPTLQQIDDCTAIVEAAQSR
HHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
LKGQLAIDYVVPDYYALRPKTCMGGWGRQFFNISPSGKVLPCHAAETITGLAFDSVRGGA
CCCCEEEEEECCCCEECCCCHHCCCCCHHHEEECCCCCEEECCHHHHHHHHHHHCCCCCH
SIAEIWRNSEALNRYRGTSWMQQPCASCAFKEIDFGGCRCQAFALAGDAAATDPACALSP
HHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCHHHHHH
LHKRIFKTAEAEAEAGGDKFVYRNFAGGTAEGRSTTSPRHSGARTARTRNLAVP
HHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCCC
>Mature Secondary Structure 
SAARNETIHAADGVAVLESRGSVAENFGIPLAVLLELTHRCPLQCPYCSNPVELERGGA
CCCCCCCEECCCCCCEECCCCCHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCEECCCCC
ELTTDEWKRVLGELAAIGVLQVHFSGGEPTARKDLVELVRHASDVGLYTNLITSAVLLTR
CCCHHHHHHHHHHHHHEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERLAALADAGLCHVQISFQGYEPVVADRVAGFANGHAKKIEAARWTRELDLPLTVNAVMH
HHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEHHHHHH
RQNLHQLPDIIDMAVALDADRLEVANVQYYGWALKNRAALMPTLQQIDDCTAIVEAAQSR
HHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
LKGQLAIDYVVPDYYALRPKTCMGGWGRQFFNISPSGKVLPCHAAETITGLAFDSVRGGA
CCCCEEEEEECCCCEECCCCHHCCCCCHHHEEECCCCCEEECCHHHHHHHHHHHCCCCCH
SIAEIWRNSEALNRYRGTSWMQQPCASCAFKEIDFGGCRCQAFALAGDAAATDPACALSP
HHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCHHHHHH
LHKRIFKTAEAEAEAGGDKFVYRNFAGGTAEGRSTTSPRHSGARTARTRNLAVP
HHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA