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The map label for this gene is yiaM [C]

Identifier: 86750439

GI number: 86750439

Start: 3807593

End: 3808153

Strand: Reverse

Name: yiaM [C]

Synonym: RPB_3328

Alternate gene names: 86750439

Gene position: 3808153-3807593 (Counterclockwise)

Preceding gene: 86750440

Following gene: 86750438

Centisome position: 71.43

GC content: 63.64

Gene sequence:

>561_bases
GTGACGCTGCGGGTGATGTTCCATCACATCGAGGAGGCGCTGATCGCCTTGATTCTCGGCGTGATGACGCTTTTGACATT
CGTGCAGGTCGTCCTGCGCTACGGCTTCAACTCCGGCTTCATCTGGGCGCTGGAGGCGAATTTCTATCTGTTCGCCTGGC
TGGTGATGATCGGCATCGCCTATTGCGTCCGCGTCCGGGCCCATATCGGGGTCGACGCGGCCGTCAACCTGCTGCCCGCG
GGCGGCCGGCGCGTCGTCGGCCTGATCGTGGTGGCGCTGGCGCTGCTCTATGCCGGCCTGATGATCTACGGCTCCTACGA
GTACATCAACCGCTTGATGATCATCGACGTCGAGGCCGAAGACATTCCGGTCAAGCGCTGGATCCTCAGCATCTGCCTGC
CGATCGGCTTCGCCGCGCTGTTCATCCGCCTGCTCGAAATGGGATGGCGGATCGTCACCGGCCAGTCCGGCGGCTACGAA
TTGGCCGACGAGGCCCGCGAGGCGGTGGAACATCACCTGCCGAATCACCCGGAACCCGACGCCACGACGGTGCAGCGATG
A

Upstream 100 bases:

>100_bases
ACGAAGACCAACTGAGCAAACAGGACCAGTTGATTGATCGAACGACGGCGGTCGCGGATTCCCGCGGCCGCCGTTGTGAC
GACCTAGGGGGAGGAAGCCG

Downstream 100 bases:

>100_bases
ACACCATCTTCCTGTTCGCGACGCTGTTCGCGTTGCTCGGCATCGGCATGCCGATCGCGATGTCGCTCGGCCTGTCGTCG
ATCCTGACGATCCTGCTGTT

Product: tripartite ATP-independent periplasmic transporter DctQ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 185

Protein sequence:

>186_residues
MTLRVMFHHIEEALIALILGVMTLLTFVQVVLRYGFNSGFIWALEANFYLFAWLVMIGIAYCVRVRAHIGVDAAVNLLPA
GGRRVVGLIVVALALLYAGLMIYGSYEYINRLMIIDVEAEDIPVKRWILSICLPIGFAALFIRLLEMGWRIVTGQSGGYE
LADEAREAVEHHLPNHPEPDATTVQR

Sequences:

>Translated_186_residues
MTLRVMFHHIEEALIALILGVMTLLTFVQVVLRYGFNSGFIWALEANFYLFAWLVMIGIAYCVRVRAHIGVDAAVNLLPA
GGRRVVGLIVVALALLYAGLMIYGSYEYINRLMIIDVEAEDIPVKRWILSICLPIGFAALFIRLLEMGWRIVTGQSGGYE
LADEAREAVEHHLPNHPEPDATTVQR
>Mature_185_residues
TLRVMFHHIEEALIALILGVMTLLTFVQVVLRYGFNSGFIWALEANFYLFAWLVMIGIAYCVRVRAHIGVDAAVNLLPAG
GRRVVGLIVVALALLYAGLMIYGSYEYINRLMIIDVEAEDIPVKRWILSICLPIGFAALFIRLLEMGWRIVTGQSGGYEL
ADEAREAVEHHLPNHPEPDATTVQR

Specific function: Unknown

COG id: COG3090

COG function: function code G; TRAP-type C4-dicarboxylate transport system, small permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TRAP transporter small permease family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007387 [H]

Pfam domain/function: PF04290 DctQ [H]

EC number: NA

Molecular weight: Translated: 20840; Mature: 20709

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLRVMFHHIEEALIALILGVMTLLTFVQVVLRYGFNSGFIWALEANFYLFAWLVMIGIA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHH
YCVRVRAHIGVDAAVNLLPAGGRRVVGLIVVALALLYAGLMIYGSYEYINRLMIIDVEAE
HHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCEEEEEEECCC
DIPVKRWILSICLPIGFAALFIRLLEMGWRIVTGQSGGYELADEAREAVEHHLPNHPEPD
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCC
ATTVQR
CCCCCC
>Mature Secondary Structure 
TLRVMFHHIEEALIALILGVMTLLTFVQVVLRYGFNSGFIWALEANFYLFAWLVMIGIA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHH
YCVRVRAHIGVDAAVNLLPAGGRRVVGLIVVALALLYAGLMIYGSYEYINRLMIIDVEAE
HHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCEEEEEEECCC
DIPVKRWILSICLPIGFAALFIRLLEMGWRIVTGQSGGYELADEAREAVEHHLPNHPEPD
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCC
ATTVQR
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]