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The map label for this gene is dctP [H]

Identifier: 86750440

GI number: 86750440

Start: 3808239

End: 3809237

Strand: Reverse

Name: dctP [H]

Synonym: RPB_3329

Alternate gene names: 86750440

Gene position: 3809237-3808239 (Counterclockwise)

Preceding gene: 86750441

Following gene: 86750439

Centisome position: 71.45

GC content: 60.16

Gene sequence:

>999_bases
ATGCGTAAATCGATATTCGTAGTTGCATCGATCGCAGCGCTCGCGCTGGTCGGCCCGGCCGCGGCGCAGCAGCCGATCGT
CGTCAAATTCAGCCACGTGGTGGCGGACAATACGCCGAAGGGTCAGGCCGCGATCAAGTTCAAGGAACTGGCGGAGAAGT
ACACCAACGGCAAGGTGAAGGTCGAAGTCTATCCGAACTCGCAACTGTTCGGCGACGCCAAGGAAATGGAAGCGGTCGCG
CTCGGCGACGTGCAGTTCATCGCGCCGTCGCTGTCGAAGTTCGACAAGTTCACCAAGCAGATTCAGGTGTTCGATCTGCC
GTTCCTGTTCAACGACATCGCCGCGGTCGATCGTTTCCAGGCCGGAAAGCAGGGGCAGGCTCTGCTGCGCTCGATGGAAT
CGAAGAACTTCCTGGGCCTCGCCTACTGGCACAACGGCATGAAGCAGATCTCGGCCAATAGGCCGCTGCTGAAGCCGGAA
GACGCCAAGGGTCTGAAGTTCCGCATCCAGGCGTCGGACATTCTCGCCGCGCAGTTCCAGGGCTTGAACGCCACCCCGCA
GAAGCTCGCCTTCTCGGAAGTCTATCAGGCGCTGCAGGTCGGCACCGTCGACGGCCAGGAGAACACCTGGTCGAACATCT
TCTCGCAGAAATTCTACGAAGTGCAGAAGGACATCACCGAGTCTGATCACGGCGTGATCGACTACATGGTCGTGGTCAAC
GCCAAGTGGTGGAACGGCCTGTCGAAGGATCTGCAGGACGCGATGAAGAAGGCGATGGACGAGGCCACCAAGGTCAACAA
CGACGTCGCCGGCAAGCTCAACGACGAGGCCAAGCAGAAGATCGCGTCCTCCGGCGCCAGCAAGATCCATCAGCTGACGC
CCGAGCAGCGCAAGCAGTGGGTCGAAGCGATGAAGCCGGTCTGGGCCAAGTTCGAAAGCGCGATCGGCAAGGACCTGATC
GACGCGGCAGTGGCGTCGAACGACACGAAGACCAACTGA

Upstream 100 bases:

>100_bases
GGGCAATAGCCTTTCGTAGCGCTTCTCTATATTGGTGCGGCTGGTAGTCGAATGAAGGAGGGGCGCCGGGGCGCATTCCT
CGAACGATTTGGGAGAGAAC

Downstream 100 bases:

>100_bases
GCAAACAGGACCAGTTGATTGATCGAACGACGGCGGTCGCGGATTCCCGCGGCCGCCGTTGTGACGACCTAGGGGGAGGA
AGCCGGTGACGCTGCGGGTG

Product: TRAP dicarboxylate transporter DctP subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MRKSIFVVASIAALALVGPAAAQQPIVVKFSHVVADNTPKGQAAIKFKELAEKYTNGKVKVEVYPNSQLFGDAKEMEAVA
LGDVQFIAPSLSKFDKFTKQIQVFDLPFLFNDIAAVDRFQAGKQGQALLRSMESKNFLGLAYWHNGMKQISANRPLLKPE
DAKGLKFRIQASDILAAQFQGLNATPQKLAFSEVYQALQVGTVDGQENTWSNIFSQKFYEVQKDITESDHGVIDYMVVVN
AKWWNGLSKDLQDAMKKAMDEATKVNNDVAGKLNDEAKQKIASSGASKIHQLTPEQRKQWVEAMKPVWAKFESAIGKDLI
DAAVASNDTKTN

Sequences:

>Translated_332_residues
MRKSIFVVASIAALALVGPAAAQQPIVVKFSHVVADNTPKGQAAIKFKELAEKYTNGKVKVEVYPNSQLFGDAKEMEAVA
LGDVQFIAPSLSKFDKFTKQIQVFDLPFLFNDIAAVDRFQAGKQGQALLRSMESKNFLGLAYWHNGMKQISANRPLLKPE
DAKGLKFRIQASDILAAQFQGLNATPQKLAFSEVYQALQVGTVDGQENTWSNIFSQKFYEVQKDITESDHGVIDYMVVVN
AKWWNGLSKDLQDAMKKAMDEATKVNNDVAGKLNDEAKQKIASSGASKIHQLTPEQRKQWVEAMKPVWAKFESAIGKDLI
DAAVASNDTKTN
>Mature_332_residues
MRKSIFVVASIAALALVGPAAAQQPIVVKFSHVVADNTPKGQAAIKFKELAEKYTNGKVKVEVYPNSQLFGDAKEMEAVA
LGDVQFIAPSLSKFDKFTKQIQVFDLPFLFNDIAAVDRFQAGKQGQALLRSMESKNFLGLAYWHNGMKQISANRPLLKPE
DAKGLKFRIQASDILAAQFQGLNATPQKLAFSEVYQALQVGTVDGQENTWSNIFSQKFYEVQKDITESDHGVIDYMVVVN
AKWWNGLSKDLQDAMKKAMDEATKVNNDVAGKLNDEAKQKIASSGASKIHQLTPEQRKQWVEAMKPVWAKFESAIGKDLI
DAAVASNDTKTN

Specific function: Binds C4-dicarboxylates; part of the binding-protein- dependent transport system for uptake of C4-dicarboxylates [H]

COG id: COG1638

COG function: function code G; TRAP-type C4-dicarboxylate transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 7 family [H]

Homologues:

Organism=Escherichia coli, GI1790004, Length=300, Percent_Identity=31.3333333333333, Blast_Score=136, Evalue=2e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018389
- InterPro:   IPR004682 [H]

Pfam domain/function: PF03480 SBP_bac_7 [H]

EC number: NA

Molecular weight: Translated: 36661; Mature: 36661

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKSIFVVASIAALALVGPAAAQQPIVVKFSHVVADNTPKGQAAIKFKELAEKYTNGKVK
CCCCHHHHHHHHHHHHHCCHHCCCCEEEEEHHHHCCCCCCCCHHHHHHHHHHHHCCCEEE
VEVYPNSQLFGDAKEMEAVALGDVQFIAPSLSKFDKFTKQIQVFDLPFLFNDIAAVDRFQ
EEECCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEECHHHHHHHHHHHHHC
AGKQGQALLRSMESKNFLGLAYWHNGMKQISANRPLLKPEDAKGLKFRIQASDILAAQFQ
CCCHHHHHHHHHCCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHHHHHHHC
GLNATPQKLAFSEVYQALQVGTVDGQENTWSNIFSQKFYEVQKDITESDHGVIDYMVVVN
CCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEE
AKWWNGLSKDLQDAMKKAMDEATKVNNDVAGKLNDEAKQKIASSGASKIHQLTPEQRKQW
CHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHH
VEAMKPVWAKFESAIGKDLIDAAVASNDTKTN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRKSIFVVASIAALALVGPAAAQQPIVVKFSHVVADNTPKGQAAIKFKELAEKYTNGKVK
CCCCHHHHHHHHHHHHHCCHHCCCCEEEEEHHHHCCCCCCCCHHHHHHHHHHHHCCCEEE
VEVYPNSQLFGDAKEMEAVALGDVQFIAPSLSKFDKFTKQIQVFDLPFLFNDIAAVDRFQ
EEECCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEECHHHHHHHHHHHHHC
AGKQGQALLRSMESKNFLGLAYWHNGMKQISANRPLLKPEDAKGLKFRIQASDILAAQFQ
CCCHHHHHHHHHCCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHHHHHHHC
GLNATPQKLAFSEVYQALQVGTVDGQENTWSNIFSQKFYEVQKDITESDHGVIDYMVVVN
CCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEE
AKWWNGLSKDLQDAMKKAMDEATKVNNDVAGKLNDEAKQKIASSGASKIHQLTPEQRKQW
CHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHH
VEAMKPVWAKFESAIGKDLIDAAVASNDTKTN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1809844 [H]