| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86750048
Identifier: 86750048
GI number: 86750048
Start: 3342786
End: 3343022
Strand: Reverse
Name: 86750048
Synonym: RPB_2931
Alternate gene names: NA
Gene position: 3343022-3342786 (Counterclockwise)
Preceding gene: 86750049
Following gene: 86750046
Centisome position: 62.7
GC content: 58.23
Gene sequence:
>237_bases ATGACCATCAGCACCCGTATCGCTCTCGGCCTCACCGCCGCCGTCGTCTCTCTCAGCCTCGCCGCCGCGCCGGCGGCCTT CGCCATGGACAAGACCGACACCATGAAGAAGGACACCATGTCCAAGGACGGCATGAAAAAGGACACGATGGCGAAGGATT CGATGTCGAAAGACGGCATGAAGAAGGACGACGGCATGCACAAGGACAACATGTCGAAGGACGGCATGAAGAAGTAA
Upstream 100 bases:
>100_bases AATATTCGCCGTCCGCGCGTAACAAAGTCATCGCCGCGTCCGTCTGGACCTGTAGCGGCTCTCGCCGCGTCCCGATTGAT CGCAACAGGATGACAGCAAC
Downstream 100 bases:
>100_bases GCGCGGCCTGCGGTGGGCCCGTTCCGGTACGATCGGGCCCAGCCGGGCCGACGATGTCAGTTGATATCGGAGAGCCGGCG CAGCGTGGCGCGGAAGCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 78; Mature: 77
Protein sequence:
>78_residues MTISTRIALGLTAAVVSLSLAAAPAAFAMDKTDTMKKDTMSKDGMKKDTMAKDSMSKDGMKKDDGMHKDNMSKDGMKK
Sequences:
>Translated_78_residues MTISTRIALGLTAAVVSLSLAAAPAAFAMDKTDTMKKDTMSKDGMKKDTMAKDSMSKDGMKKDDGMHKDNMSKDGMKK >Mature_77_residues TISTRIALGLTAAVVSLSLAAAPAAFAMDKTDTMKKDTMSKDGMKKDTMAKDSMSKDGMKKDDGMHKDNMSKDGMKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8364; Mature: 8233
Theoretical pI: Translated: 10.24; Mature: 10.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 14.1 %Met (Translated Protein) 14.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 13.0 %Met (Mature Protein) 13.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTISTRIALGLTAAVVSLSLAAAPAAFAMDKTDTMKKDTMSKDGMKKDTMAKDSMSKDGM CCCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHCCCCCCCCHHHHHHCCCCCCC KKDDGMHKDNMSKDGMKK CCCCCCCCCCCCCCCCCC >Mature Secondary Structure TISTRIALGLTAAVVSLSLAAAPAAFAMDKTDTMKKDTMSKDGMKKDTMAKDSMSKDGM CCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHCCCCCCCCHHHHHHCCCCCCC KKDDGMHKDNMSKDGMKK CCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA