| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86750031
Identifier: 86750031
GI number: 86750031
Start: 3322813
End: 3323151
Strand: Reverse
Name: 86750031
Synonym: RPB_2914
Alternate gene names: NA
Gene position: 3323151-3322813 (Counterclockwise)
Preceding gene: 86750032
Following gene: 86750029
Centisome position: 62.33
GC content: 59.88
Gene sequence:
>339_bases ATGCTGATTCAATACGGGCAAGCGCTCGGCGACTATCTCTACGACGTGTTCGTCGCCAAGTTCGATTTCTGGCTGGCCTT CGGCCTGGTCGCGCAATTGCTGTTCACCGCGCGCTTCGTGGTGCAGTGGATTTCCAGCGAGCGCGCCGGCAAGAGCGTGG TGCCGATGGCGTTCTGGTTCTTCTCGATGGGCGGCGGGCTGATGACGCTGGTCTACGGCATCGCCAAGCGCGAGCCGGTG ATCATCCTCGGCCAGTCGATGGCGACGGTGATCTACATCCGCAACATCATGCTGATCATCAAGAACCATTCGAAAGGCTC GGAGAGCCTGCCGAACTGA
Upstream 100 bases:
>100_bases GCTTCTTCGATCGGCTGTGGGTCGGTCTGATGGATCTCGCCGGCGTGTGGTGGCTGATCCGCCGCAAGAAGGCCGTGCCC GCAGCGGCCGAGGTGAACGA
Downstream 100 bases:
>100_bases TATCGACCTGTTTGCCTGACCGTCATCCTGAGGTGCGAGCGCAGCGAGCCTCGAAGGATGACTGCGTCGCGTGCCTGTGG CTCATCCTTCGAGGCCCATC
Product: Lipid A biosynthesis-like
Products: NA
Alternate protein names: Lipid A Biosynthesis Domain Protein; Lipid A Biosynthesis; Lipid A Biosynthesis-Like; Transport-Related Membrane Protein; Lipid-A-Disaccharide Synthase Domain-Containing Protein; Lipid A Biosynthesis N-Terminal; Lipid-A-Disaccharide Synthase; Lipid A Biosynthesis Protein; Lipid A Biosynthesis N-Terminal Domain Family; LAB_N Domain-Containing Protein; Lipid A Disaccharide Synthase; Lipid A Biosynthesis N-Terminal Domain Protein
Number of amino acids: Translated: 112; Mature: 112
Protein sequence:
>112_residues MLIQYGQALGDYLYDVFVAKFDFWLAFGLVAQLLFTARFVVQWISSERAGKSVVPMAFWFFSMGGGLMTLVYGIAKREPV IILGQSMATVIYIRNIMLIIKNHSKGSESLPN
Sequences:
>Translated_112_residues MLIQYGQALGDYLYDVFVAKFDFWLAFGLVAQLLFTARFVVQWISSERAGKSVVPMAFWFFSMGGGLMTLVYGIAKREPV IILGQSMATVIYIRNIMLIIKNHSKGSESLPN >Mature_112_residues MLIQYGQALGDYLYDVFVAKFDFWLAFGLVAQLLFTARFVVQWISSERAGKSVVPMAFWFFSMGGGLMTLVYGIAKREPV IILGQSMATVIYIRNIMLIIKNHSKGSESLPN
Specific function: Unknown
COG id: COG3952
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12605; Mature: 12605
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIQYGQALGDYLYDVFVAKFDFWLAFGLVAQLLFTARFVVQWISSERAGKSVVPMAFWF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH FSMGGGLMTLVYGIAKREPVIILGQSMATVIYIRNIMLIIKNHSKGSESLPN HHHCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHEECCCCCCCCCCC >Mature Secondary Structure MLIQYGQALGDYLYDVFVAKFDFWLAFGLVAQLLFTARFVVQWISSERAGKSVVPMAFWF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH FSMGGGLMTLVYGIAKREPVIILGQSMATVIYIRNIMLIIKNHSKGSESLPN HHHCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA