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The map label for this gene is aapJ [H]

Identifier: 86750029

GI number: 86750029

Start: 3320098

End: 3321111

Strand: Reverse

Name: aapJ [H]

Synonym: RPB_2912

Alternate gene names: 86750029

Gene position: 3321111-3320098 (Counterclockwise)

Preceding gene: 86750031

Following gene: 86750028

Centisome position: 62.29

GC content: 65.88

Gene sequence:

>1014_bases
ATGAAACGCGTATCCCTCGTCGCCGCCGCCGTCGTCGCCTGCTTCGCGGCCCAGAGCGCGGGCGCGCAGACGCTGAAGAC
GGTCAAGGACCGCGGCATTCTGTCCTGCGGCGTCAGCCAGGGGCTTCCGGGATTCTCGGCGCCCGACGACAAGGGCAACT
GGACCGGCCTCGACGTCGACGTCTGCCGCGGCATCGCGGCGGCGATCTTCGACGACCCGAGCAAGGTGAAATTCGTGCCG
CTGTCGGCCAAGGACCGCTTCACCGCGCTGCAATCCGGCGAGATCGACGTGCTGTCGCGCAACACCACCTGGACGCTGTC
GCGCGACACCTCGCTCGGCGTCAACTTCGCCGGCGTCAGCTATTACGACGGGCAGGGCTTCCTGGTGAAGAAGGCGCTCA
AGGTCAATTCCGCGCTCGAGCTCAACAGCGCCTCGGTCTGCGTGCAGACCGGCACCACCAACGAGCAGAACGTCGCCGAC
TACTTCAAGGGCAACAACATGAAGTACGAGGTGATCGCTTTCGCCAACGCCGACGAGGCGATCAAGGCCTATGAGTCCGG
CCGCTGCGACGTGTTCACCTCGGACGTGTCCCAGCTCTACGCGCAGCGGCTGAAGCTGGCGACGCCGGCCGACCACGTCG
TGCTGCCGGAAGTGATCTCCAAGGAGCCGCTCGGTCCGCTGGTCCGGCACGGCGACGACCAGTGGTTCGACGTGGTCAAG
TGGACGCTGTTCGCGATGATCAATGCCGAGGAACTCGGCGTCACCCAGAGCAACGTCGCCGAGATGGCCAAGTCCGACAA
GCCGGAACTGCGGCGCGTGTTCGGCACCGACGGCAATCTCGGCGAGCAGCTCGGCCTGACCAAGGACTGGGTCGCGCGGA
TCATCAAGGCGACCGGCAATTACGGCGAATCGTTCGAGCGCAACGTCGGCGCCGGCTCCAAGCTCGAAATCGCCCGCGGC
CTGAACAAGCCCTGGAACAAGGGCGGCATCATGTACGCGCCGCCGATCCGCTGA

Upstream 100 bases:

>100_bases
GATGCGCGGATCCACCGGCTGCTCCTGCTGCGCTTGCCGCAACCACGCAACACCGCGATGCCGGCCAGACGCCGCAACTC
ATTCCTTGAAAGGTTTTTCG

Downstream 100 bases:

>100_bases
CGCGCGGATCACGGCCGTGGCGATCGACGCCCGACCACCGCCGTCGCAATTCGGCGCGAGATTGCGCCGGGCGCTCGGCG
GTCGATCCGGCTGGAAGGGG

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MKRVSLVAAAVVACFAAQSAGAQTLKTVKDRGILSCGVSQGLPGFSAPDDKGNWTGLDVDVCRGIAAAIFDDPSKVKFVP
LSAKDRFTALQSGEIDVLSRNTTWTLSRDTSLGVNFAGVSYYDGQGFLVKKALKVNSALELNSASVCVQTGTTNEQNVAD
YFKGNNMKYEVIAFANADEAIKAYESGRCDVFTSDVSQLYAQRLKLATPADHVVLPEVISKEPLGPLVRHGDDQWFDVVK
WTLFAMINAEELGVTQSNVAEMAKSDKPELRRVFGTDGNLGEQLGLTKDWVARIIKATGNYGESFERNVGAGSKLEIARG
LNKPWNKGGIMYAPPIR

Sequences:

>Translated_337_residues
MKRVSLVAAAVVACFAAQSAGAQTLKTVKDRGILSCGVSQGLPGFSAPDDKGNWTGLDVDVCRGIAAAIFDDPSKVKFVP
LSAKDRFTALQSGEIDVLSRNTTWTLSRDTSLGVNFAGVSYYDGQGFLVKKALKVNSALELNSASVCVQTGTTNEQNVAD
YFKGNNMKYEVIAFANADEAIKAYESGRCDVFTSDVSQLYAQRLKLATPADHVVLPEVISKEPLGPLVRHGDDQWFDVVK
WTLFAMINAEELGVTQSNVAEMAKSDKPELRRVFGTDGNLGEQLGLTKDWVARIIKATGNYGESFERNVGAGSKLEIARG
LNKPWNKGGIMYAPPIR
>Mature_337_residues
MKRVSLVAAAVVACFAAQSAGAQTLKTVKDRGILSCGVSQGLPGFSAPDDKGNWTGLDVDVCRGIAAAIFDDPSKVKFVP
LSAKDRFTALQSGEIDVLSRNTTWTLSRDTSLGVNFAGVSYYDGQGFLVKKALKVNSALELNSASVCVQTGTTNEQNVAD
YFKGNNMKYEVIAFANADEAIKAYESGRCDVFTSDVSQLYAQRLKLATPADHVVLPEVISKEPLGPLVRHGDDQWFDVVK
WTLFAMINAEELGVTQSNVAEMAKSDKPELRRVFGTDGNLGEQLGLTKDWVARIIKATGNYGESFERNVGAGSKLEIARG
LNKPWNKGGIMYAPPIR

Specific function: Part of a binding-protein-dependent transport system for L-amino acids, affects the uptake as well as efflux of these amino acids [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

Organism=Escherichia coli, GI1786876, Length=216, Percent_Identity=24.537037037037, Blast_Score=69, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005768
- InterPro:   IPR001638
- InterPro:   IPR018313 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 36384; Mature: 36384

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: PS00359 RIBOSOMAL_L11 ; PS01039 SBP_BACTERIAL_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRVSLVAAAVVACFAAQSAGAQTLKTVKDRGILSCGVSQGLPGFSAPDDKGNWTGLDVD
CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEEEECHHCCCCCCCCCCCCCCCCCCCHH
VCRGIAAAIFDDPSKVKFVPLSAKDRFTALQSGEIDVLSRNTTWTLSRDTSLGVNFAGVS
HHHHHHHHHCCCCCCEEEEEECCCCCHHEECCCCEEEEECCCEEEEECCCCCCEEEEEEE
YYDGQGFLVKKALKVNSALELNSASVCVQTGTTNEQNVADYFKGNNMKYEVIAFANADEA
EECCCCEEEHHHHHHCCCEEECCCEEEEEECCCCCCHHHHHHCCCCEEEEEEEECCCHHH
IKAYESGRCDVFTSDVSQLYAQRLKLATPADHVVLPEVISKEPLGPLVRHGDDQWFDVVK
HHHHHCCCCEEEHHHHHHHHHHHHHCCCCCCCEECHHHHCCCCCCHHHHCCCHHHHHHHH
WTLFAMINAEELGVTQSNVAEMAKSDKPELRRVFGTDGNLGEQLGLTKDWVARIIKATGN
HHHHHHCCHHHHCCCHHHHHHHHHCCCHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHCCC
YGESFERNVGAGSKLEIARGLNKPWNKGGIMYAPPIR
CCCHHHHCCCCCCEEHHHHCCCCCCCCCCEEECCCCC
>Mature Secondary Structure
MKRVSLVAAAVVACFAAQSAGAQTLKTVKDRGILSCGVSQGLPGFSAPDDKGNWTGLDVD
CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEEEECHHCCCCCCCCCCCCCCCCCCCHH
VCRGIAAAIFDDPSKVKFVPLSAKDRFTALQSGEIDVLSRNTTWTLSRDTSLGVNFAGVS
HHHHHHHHHCCCCCCEEEEEECCCCCHHEECCCCEEEEECCCEEEEECCCCCCEEEEEEE
YYDGQGFLVKKALKVNSALELNSASVCVQTGTTNEQNVADYFKGNNMKYEVIAFANADEA
EECCCCEEEHHHHHHCCCEEECCCEEEEEECCCCCCHHHHHHCCCCEEEEEEEECCCHHH
IKAYESGRCDVFTSDVSQLYAQRLKLATPADHVVLPEVISKEPLGPLVRHGDDQWFDVVK
HHHHHCCCCEEEHHHHHHHHHHHHHCCCCCCCEECHHHHCCCCCCHHHHCCCHHHHHHHH
WTLFAMINAEELGVTQSNVAEMAKSDKPELRRVFGTDGNLGEQLGLTKDWVARIIKATGN
HHHHHHCCHHHHCCCHHHHHHHHHCCCHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHCCC
YGESFERNVGAGSKLEIARGLNKPWNKGGIMYAPPIR
CCCHHHHCCCCCCEEHHHHCCCCCCCCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8898392 [H]