| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86750010
Identifier: 86750010
GI number: 86750010
Start: 3294334
End: 3295164
Strand: Reverse
Name: 86750010
Synonym: RPB_2893
Alternate gene names: NA
Gene position: 3295164-3294334 (Counterclockwise)
Preceding gene: 86750011
Following gene: 86750009
Centisome position: 61.8
GC content: 71.6
Gene sequence:
>831_bases ATGACGCAGCCTGCAAGGGCCCAAGAGCCTTCCATGGAGGAGATTCTGGCGTCGATCCGTCGTATCATCGCGGACGATGA AGCCAAGCCCGCGACCGCGGCCAAACCGCCGGTCGCCGCCGCCCCGAAGCCGGAGCCGCCGAAACCGGTTCCAACGCCGA GCAAGCCCGCGGCCATGACCCCACCTCCGCCCGCCCCGAGCCCGGCCCCGCAGGCCGCAGCCCCCAAGCCAGTCGCGCCG CCGAAACCGGCGCCTGCGCCACCGCCGCCCGCGCCGGCCGCGGCGGAGGCCAGCAACAATCAGGACGACATCGACGCGCT GCTGGCGGGGCTCGATGCCTCGACCACCGAGGAAGAGGTGCGGCCGCCGCAGCCCGACGGCGACGTGCTCGAACTGACCG ACGAGATGGCCCTGCCGGAGCCTGAGCCGGAGCCGGAGCCGGAGCCTGCTCCGACGCCGACCCCGCTGCCGCAGGCGTCG TACCGCAAGCCGGTCGAAGACGATCTCGAATTCGCCGAAGCCGCGGCGCCCAGGCCGGCGGCGCCGGAGCCGAAGCCGGC GATGCCGGAGCCCGCCTACCAGCCGTCGACATCCTCCTGGTCCGAGGATCCGCCGCAGGCGCCGATCATGTCGCGCGCCA CGGTGTCGGCCGTGGAATCGGCGTTCAATTCGCTCGCCAACACGGTGCTCAGCAACAACGCGCGCACCCTCGAGGATCTC GTCAAGGAGATGCTCCGGCCGATGCTGAAATCCTGGCTCGACGACAATCTGCCGACCCTGGTCGAGCGGATCGTGCGCCA GGAAATCGAGCGGGTGTCGCGCGGCCGCTAG
Upstream 100 bases:
>100_bases CGTTCGCTGATGAAAGTCGGCCGCGCCGATCCGGAACCGGGCCGTCCCGCAGAGCTTTGGTGTACAACGCCGACAAGGGC GTGATGATGTGGAGTCGGAG
Downstream 100 bases:
>100_bases GCGAGGGCGCTCCGCTGCGGGGCGCCGGTTCGAATTGCTGGTCTTCCCCATGTTGACTTGCGGCGCGCCGGCGGGTTTCT AGCCGCGTACCGGATGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MTQPARAQEPSMEEILASIRRIIADDEAKPATAAKPPVAAAPKPEPPKPVPTPSKPAAMTPPPPAPSPAPQAAAPKPVAP PKPAPAPPPPAPAAAEASNNQDDIDALLAGLDASTTEEEVRPPQPDGDVLELTDEMALPEPEPEPEPEPAPTPTPLPQAS YRKPVEDDLEFAEAAAPRPAAPEPKPAMPEPAYQPSTSSWSEDPPQAPIMSRATVSAVESAFNSLANTVLSNNARTLEDL VKEMLRPMLKSWLDDNLPTLVERIVRQEIERVSRGR
Sequences:
>Translated_276_residues MTQPARAQEPSMEEILASIRRIIADDEAKPATAAKPPVAAAPKPEPPKPVPTPSKPAAMTPPPPAPSPAPQAAAPKPVAP PKPAPAPPPPAPAAAEASNNQDDIDALLAGLDASTTEEEVRPPQPDGDVLELTDEMALPEPEPEPEPEPAPTPTPLPQAS YRKPVEDDLEFAEAAAPRPAAPEPKPAMPEPAYQPSTSSWSEDPPQAPIMSRATVSAVESAFNSLANTVLSNNARTLEDL VKEMLRPMLKSWLDDNLPTLVERIVRQEIERVSRGR >Mature_275_residues TQPARAQEPSMEEILASIRRIIADDEAKPATAAKPPVAAAPKPEPPKPVPTPSKPAAMTPPPPAPSPAPQAAAPKPVAPP KPAPAPPPPAPAAAEASNNQDDIDALLAGLDASTTEEEVRPPQPDGDVLELTDEMALPEPEPEPEPEPAPTPTPLPQASY RKPVEDDLEFAEAAAPRPAAPEPKPAMPEPAYQPSTSSWSEDPPQAPIMSRATVSAVESAFNSLANTVLSNNARTLEDLV KEMLRPMLKSWLDDNLPTLVERIVRQEIERVSRGR
Specific function: Unknown
COG id: COG3827
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29238; Mature: 29107
Theoretical pI: Translated: 4.18; Mature: 4.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQPARAQEPSMEEILASIRRIIADDEAKPATAAKPPVAAAPKPEPPKPVPTPSKPAAMT CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PPPPAPSPAPQAAAPKPVAPPKPAPAPPPPAPAAAEASNNQDDIDALLAGLDASTTEEEV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHC RPPQPDGDVLELTDEMALPEPEPEPEPEPAPTPTPLPQASYRKPVEDDLEFAEAAAPRPA CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHCCCCCC APEPKPAMPEPAYQPSTSSWSEDPPQAPIMSRATVSAVESAFNSLANTVLSNNARTLEDL CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH VKEMLRPMLKSWLDDNLPTLVERIVRQEIERVSRGR HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TQPARAQEPSMEEILASIRRIIADDEAKPATAAKPPVAAAPKPEPPKPVPTPSKPAAMT CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PPPPAPSPAPQAAAPKPVAPPKPAPAPPPPAPAAAEASNNQDDIDALLAGLDASTTEEEV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHC RPPQPDGDVLELTDEMALPEPEPEPEPEPAPTPTPLPQASYRKPVEDDLEFAEAAAPRPA CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHCCCCCC APEPKPAMPEPAYQPSTSSWSEDPPQAPIMSRATVSAVESAFNSLANTVLSNNARTLEDL CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH VKEMLRPMLKSWLDDNLPTLVERIVRQEIERVSRGR HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA