Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

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The map label for this gene is 86749902

Identifier: 86749902

GI number: 86749902

Start: 3175128

End: 3175997

Strand: Reverse

Name: 86749902

Synonym: RPB_2785

Alternate gene names: NA

Gene position: 3175997-3175128 (Counterclockwise)

Preceding gene: 86749903

Following gene: 86749901

Centisome position: 59.57

GC content: 66.32

Gene sequence:

>870_bases
ATGCCGTGCGGTCTCGACCATATCGTTCATGCAGTGCGCGACCTCGACGCCGCGGCGGAGGCTTATCAGCGGCTCGGTTT
CAGCGTCGGCGCGCGCAACCGCCATCCCTTCGGCACGCACAATCGCATCGTGCAACTCGACGGCTTCTTCGTCGAAATCC
TCACTGTCGCCGAACCCGAGAATATCGAACCGCATCGCGCGGACGCGTTTTCGTTCGGCGCTTACCAGCGCGACTATCTG
GCGCGGCGCGAAGGCTTCTCGATGCTGCTGCTCGCAAGCCGCGACGCTGAGGCCGACGCGCGCGGCTTCGCCGCGGTCGG
GATCGGCGCGGGCGAGATCTTCAGTTTCGGCCGGGAAGGGCAGCGGCCCGACGGCAGCATCGTCAAGCTCGGGTTCACGC
TCGCATTCGCACGCGATCCGCTGTCGCCGGACGCGGGCTTTGCGGCGTGCCGGCATCATCATCCGGAGAACTTCTGGAAT
CCGTCGTTCCAGATTCACGCCAACGGCGCGCGTGCGGCGGCGGCGGTCGTGATGATTGCCGACAACCCGACTGATCACCA
TATCTTCCTCGGCGCCTTCACCGGGGTGCGGGATCTGCACGCGTCGTCGATCGGCGTCATTGCACAGACCGAGCGCGGCG
ACATCGACATCGTCGAGCCGGTGTCGTTCCGCGACCAGTACGGCGTCGCCGCCGCGGTGGATGCGGAGGGCGCGCGTTTC
GCCGGATTGCGGATTGCCGTGGAGGAGACGGCCGTGGTTGAACGCCTGTTGCAGCAGAACGGGATCGGCGCGACGCGCCA
CATCGACCGCCTGGTCGTGCCGGATGTGTGCGGCGCGACGCTGATCTTCGAACAAGGAATGGTCCGTTGA

Upstream 100 bases:

>100_bases
CGACGGCCAGATCGTCGACACCATCACCAATCAGCTGCTGCTGCCGACCGCGTTCTCGGCCGTCAGGTAATCGTGCAGCG
ACGATGAAAGCCTTGTCCTG

Downstream 100 bases:

>100_bases
ACAAAAGCATTGCACCCGCGCCTGTCGTCGCAGCGGGAGACGTCAAATTCGGCAACGCACTGCCGCTATCGGTGATCGCC
GGCCCGTGCCAGCTCGAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 289; Mature: 288

Protein sequence:

>289_residues
MPCGLDHIVHAVRDLDAAAEAYQRLGFSVGARNRHPFGTHNRIVQLDGFFVEILTVAEPENIEPHRADAFSFGAYQRDYL
ARREGFSMLLLASRDAEADARGFAAVGIGAGEIFSFGREGQRPDGSIVKLGFTLAFARDPLSPDAGFAACRHHHPENFWN
PSFQIHANGARAAAAVVMIADNPTDHHIFLGAFTGVRDLHASSIGVIAQTERGDIDIVEPVSFRDQYGVAAAVDAEGARF
AGLRIAVEETAVVERLLQQNGIGATRHIDRLVVPDVCGATLIFEQGMVR

Sequences:

>Translated_289_residues
MPCGLDHIVHAVRDLDAAAEAYQRLGFSVGARNRHPFGTHNRIVQLDGFFVEILTVAEPENIEPHRADAFSFGAYQRDYL
ARREGFSMLLLASRDAEADARGFAAVGIGAGEIFSFGREGQRPDGSIVKLGFTLAFARDPLSPDAGFAACRHHHPENFWN
PSFQIHANGARAAAAVVMIADNPTDHHIFLGAFTGVRDLHASSIGVIAQTERGDIDIVEPVSFRDQYGVAAAVDAEGARF
AGLRIAVEETAVVERLLQQNGIGATRHIDRLVVPDVCGATLIFEQGMVR
>Mature_288_residues
PCGLDHIVHAVRDLDAAAEAYQRLGFSVGARNRHPFGTHNRIVQLDGFFVEILTVAEPENIEPHRADAFSFGAYQRDYLA
RREGFSMLLLASRDAEADARGFAAVGIGAGEIFSFGREGQRPDGSIVKLGFTLAFARDPLSPDAGFAACRHHHPENFWNP
SFQIHANGARAAAAVVMIADNPTDHHIFLGAFTGVRDLHASSIGVIAQTERGDIDIVEPVSFRDQYGVAAAVDAEGARFA
GLRIAVEETAVVERLLQQNGIGATRHIDRLVVPDVCGATLIFEQGMVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31296; Mature: 31164

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPCGLDHIVHAVRDLDAAAEAYQRLGFSVGARNRHPFGTHNRIVQLDGFFVEILTVAEPE
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCEEEEEEEECCCC
NIEPHRADAFSFGAYQRDYLARREGFSMLLLASRDAEADARGFAAVGIGAGEIFSFGREG
CCCCCCCCCEECCCHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEECCHHHHHHCCCCC
QRPDGSIVKLGFTLAFARDPLSPDAGFAACRHHHPENFWNPSFQIHANGARAAAAVVMIA
CCCCCCEEEEEEEEEEECCCCCCCCCHHHHHHCCCCCCCCCCEEEEECCCCEEEEEEEEE
DNPTDHHIFLGAFTGVRDLHASSIGVIAQTERGDIDIVEPVSFRDQYGVAAAVDAEGARF
CCCCCCEEEEEECCCHHHHCCCCEEEEEECCCCCEEEECCCCCCCCCCEEEEECCCCCEE
AGLRIAVEETAVVERLLQQNGIGATRHIDRLVVPDVCGATLIFEQGMVR
EEEEEEEHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHHHCCCCC
>Mature Secondary Structure 
PCGLDHIVHAVRDLDAAAEAYQRLGFSVGARNRHPFGTHNRIVQLDGFFVEILTVAEPE
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCEEEEEEEECCCC
NIEPHRADAFSFGAYQRDYLARREGFSMLLLASRDAEADARGFAAVGIGAGEIFSFGREG
CCCCCCCCCEECCCHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEECCHHHHHHCCCCC
QRPDGSIVKLGFTLAFARDPLSPDAGFAACRHHHPENFWNPSFQIHANGARAAAAVVMIA
CCCCCCEEEEEEEEEEECCCCCCCCCHHHHHHCCCCCCCCCCEEEEECCCCEEEEEEEEE
DNPTDHHIFLGAFTGVRDLHASSIGVIAQTERGDIDIVEPVSFRDQYGVAAAVDAEGARF
CCCCCCEEEEEECCCHHHHCCCCEEEEEECCCCCEEEECCCCCCCCCCEEEEECCCCCEE
AGLRIAVEETAVVERLLQQNGIGATRHIDRLVVPDVCGATLIFEQGMVR
EEEEEEEHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA