| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
Click here to switch to the map view.
The map label for this gene is yusQ [H]
Identifier: 86749884
GI number: 86749884
Start: 3155736
End: 3156116
Strand: Reverse
Name: yusQ [H]
Synonym: RPB_2767
Alternate gene names: 86749884
Gene position: 3156116-3155736 (Counterclockwise)
Preceding gene: 86749885
Following gene: 86749883
Centisome position: 59.2
GC content: 60.63
Gene sequence:
>381_bases ATGCCGCTAGTCCGGATTTCGCTGCGCGCCGGCAAAAGCGAGGCCTACCGGCAGGCGGTCGGCGAGGGCGTGTATCAGGC GCTGCGCGACACCTTCAACGTTCCTGAAGAAGACCGCTTCGTCGTCGTCTCGGAACATGGCGCGGCGGATTTCCAGTTCA GCAAGACCTACATGGACATCGCCCGGTCCGACGATCTGGTGATCATCCAGATCACGGTCAGCAACACCCGTAATGTCGCG CAGAAGCAGGCGCTGTATGCAAGGATCGCCGAGTTGCTGGCGCGTGAGCCGGGCGTGCGCGGCGAAGACGTGTTCATCAA TCTGATCGAAGTCGCCAAAGAGAACTGGTCGTTCGGCAACGGCATTGCGCAATACGTCTGA
Upstream 100 bases:
>100_bases CTGAGCTGCGATCACCGCGCCGTCGACGGCGCGCTCGGCGCCGAACTGATCGGCGCGTTCAAGACGCTGATCGAAAATCC CGTGATGATGATGGTGTGAC
Downstream 100 bases:
>100_bases GCCCTCGCGCGCCGCGTTCGACCCTATGAACTGATCCGGGGATCCCATGACCGACACCTCCTTCGACGTCATCATCATCG GCTCCGGCCCCGGCGGTTAT
Product: 4-oxalocrotonate tautomerase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 126; Mature: 125
Protein sequence:
>126_residues MPLVRISLRAGKSEAYRQAVGEGVYQALRDTFNVPEEDRFVVVSEHGAADFQFSKTYMDIARSDDLVIIQITVSNTRNVA QKQALYARIAELLAREPGVRGEDVFINLIEVAKENWSFGNGIAQYV
Sequences:
>Translated_126_residues MPLVRISLRAGKSEAYRQAVGEGVYQALRDTFNVPEEDRFVVVSEHGAADFQFSKTYMDIARSDDLVIIQITVSNTRNVA QKQALYARIAELLAREPGVRGEDVFINLIEVAKENWSFGNGIAQYV >Mature_125_residues PLVRISLRAGKSEAYRQAVGEGVYQALRDTFNVPEEDRFVVVSEHGAADFQFSKTYMDIARSDDLVIIQITVSNTRNVAQ KQALYARIAELLAREPGVRGEDVFINLIEVAKENWSFGNGIAQYV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 4-oxalocrotonate tautomerase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004370 - InterPro: IPR014347 [H]
Pfam domain/function: PF01361 Tautomerase [H]
EC number: NA
Molecular weight: Translated: 14124; Mature: 13993
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLVRISLRAGKSEAYRQAVGEGVYQALRDTFNVPEEDRFVVVSEHGAADFQFSKTYMDI CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEHHHHHHH ARSDDLVIIQITVSNTRNVAQKQALYARIAELLAREPGVRGEDVFINLIEVAKENWSFGN HCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCC GIAQYV CHHHCC >Mature Secondary Structure PLVRISLRAGKSEAYRQAVGEGVYQALRDTFNVPEEDRFVVVSEHGAADFQFSKTYMDI CEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEHHHHHHH ARSDDLVIIQITVSNTRNVAQKQALYARIAELLAREPGVRGEDVFINLIEVAKENWSFGN HCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCC GIAQYV CHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]