Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

Click here to switch to the map view.

The map label for this gene is 86749806

Identifier: 86749806

GI number: 86749806

Start: 3073667

End: 3074047

Strand: Reverse

Name: 86749806

Synonym: RPB_2689

Alternate gene names: NA

Gene position: 3074047-3073667 (Counterclockwise)

Preceding gene: 86749807

Following gene: 86749805

Centisome position: 57.66

GC content: 64.04

Gene sequence:

>381_bases
ATGCCGAAGCCTGACACGAACGCTGCACCGTTCTCCTACGAGGGGCTGGATCGCGTGATCCACGAGAAGGCGAGGCTGGG
GATGCTGACCTCGCTGATGGCGCACCCGAAGGGGCTTGCGTTCGCCGACCTCAAAAGGCTATGCGGACTGACGGACGGCA
ATCTCAGCCGGCATCTTCAGGTGCTGCAGGAAGCCGGAATGGTCGAGGTGTCGAAGGGATACGAAGCCAACCGGCCGCTG
ACGACCTGTCGTTTGACGAAGACCGGCCGCCGCCAGTTTCTCGATTACCTCACCGTGTTGGAGCAGCTCGTGCGCGACGC
CGCCAAGGCGGCCGGCAGTAGCGATCCGCTGCCGACCGGACTTCACACGCGTCCCGTCTGA

Upstream 100 bases:

>100_bases
AGCGAAAGTGCGGCCGTCTCGCCGCTAGCGATGGGTGTTCCGTTCGTGGTCGGTCAATTGCTGATGGCTGCCGTGCTGCG
GTTTGCGTCGGGAGACGACG

Downstream 100 bases:

>100_bases
AAGCACGTCTCGCCTGAACCACGTCCCCCTTTTTGCACGGAGACTTTGTGATGCAAAGCAATCTACATTCCAAACTACAT
GTCGGCATCATCATGGACGG

Product: putative transcriptional regulator

Products: NA

Alternate protein names: ArsR Family Transcriptional Regulator; MarR/EmrR Family Transcriptional Regulator; Regulatory Protein Arsr; Regulatory Protein ArsR; Transcriptional Regulator ArsR Family Protein; Transcriptional Regulator MarR/EmrR Family; Arsr Family Transcriptional Regulator; Transcriptional Regulator MarR Family; Transcriptional Regulator ArsR Family; PAS/PAC Sensor Protein

Number of amino acids: Translated: 126; Mature: 125

Protein sequence:

>126_residues
MPKPDTNAAPFSYEGLDRVIHEKARLGMLTSLMAHPKGLAFADLKRLCGLTDGNLSRHLQVLQEAGMVEVSKGYEANRPL
TTCRLTKTGRRQFLDYLTVLEQLVRDAAKAAGSSDPLPTGLHTRPV

Sequences:

>Translated_126_residues
MPKPDTNAAPFSYEGLDRVIHEKARLGMLTSLMAHPKGLAFADLKRLCGLTDGNLSRHLQVLQEAGMVEVSKGYEANRPL
TTCRLTKTGRRQFLDYLTVLEQLVRDAAKAAGSSDPLPTGLHTRPV
>Mature_125_residues
PKPDTNAAPFSYEGLDRVIHEKARLGMLTSLMAHPKGLAFADLKRLCGLTDGNLSRHLQVLQEAGMVEVSKGYEANRPLT
TCRLTKTGRRQFLDYLTVLEQLVRDAAKAAGSSDPLPTGLHTRPV

Specific function: Unknown

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13814; Mature: 13683

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKPDTNAAPFSYEGLDRVIHEKARLGMLTSLMAHPKGLAFADLKRLCGLTDGNLSRHLQ
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHH
VLQEAGMVEVSKGYEANRPLTTCRLTKTGRRQFLDYLTVLEQLVRDAAKAAGSSDPLPTG
HHHHCCCEECCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
LHTRPV
CCCCCC
>Mature Secondary Structure 
PKPDTNAAPFSYEGLDRVIHEKARLGMLTSLMAHPKGLAFADLKRLCGLTDGNLSRHLQ
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHH
VLQEAGMVEVSKGYEANRPLTTCRLTKTGRRQFLDYLTVLEQLVRDAAKAAGSSDPLPTG
HHHHCCCEECCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
LHTRPV
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA