Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

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The map label for this gene is perM [C]

Identifier: 86749792

GI number: 86749792

Start: 3056323

End: 3057498

Strand: Reverse

Name: perM [C]

Synonym: RPB_2675

Alternate gene names: 86749792

Gene position: 3057498-3056323 (Counterclockwise)

Preceding gene: 86749794

Following gene: 86749786

Centisome position: 57.35

GC content: 67.09

Gene sequence:

>1176_bases
GTGACCGTCCCAGTGATCGATCGTTTCCAGGCCCGCAACGACCTCGCCTGGGCGATCGCCATCGGCGGGATCAGTACCGT
TGCGTTCGGCGCCCTGCTCTACACCTCCTGGCATTTTGCCGGCACGCTGTTTCTGATCTTCGCCGGCATCCTGTTCGGGG
TGTTCCTCAATGCGCTGACCGATCTGGCCGGCAAGGTGGTCGGCGGCCCGCACGGGTTGCGGCTGGCACTGGTTTGCTGC
GTGCTCACGGTGATGTTCATCGGCATCGCGGTGCTCGGCGGCAACACCATCGCCCAGCAGGCGACCGCGTTGTCCGGCAC
CATCAAGGCGCAGATCGTCAACGCGAAGACCTTCCTCGAGCGGCAGGGCGTCGACACCAGTTTCATGGAACTCAACGTCG
TCGCCAATGCCGCCAATTCCGCCAATGCCGGAAGCACCGCCGCCGAGCAGCAGCCGCTGCCGCAGCCACGCAATTTGCCC
AGCGCCGGCGACCTCGCCTCCGGCGGCGGCGCGATCGTCAGCCAGACGTTGAAGCTGATCCTCGGCACCATCGGCGCGGT
CGGCAACTTCTTCATCGTGATGTTTCTCGGCCTCGCCTTCGCCGCCCAGCCCGACGTCTACCGGCGCGGCCTCGAGCGGG
TCGCGCCGCTGCGCTACCGCGCCCAGGCCAGCGCCATCGTCGGGGACACCGGCGATATGCTGAAGCGCTGGCTGCTGGCG
CAGCTCATCACCATGTCGGCGGTGTTCGCGGTGACCGCGACCGGCCTGTCGCTGATCGGGATTCCCGGCGCCTTCATCCT
CGGCATCCAGGCTGGCCTGCTCGCTTTCATCCCGACCGTCGGCGCCATTCTCGGCGGCCTGGTCATCGTCCTCGCCGCGA
TCGGGTCGGGCTGGTTCGCCGTGGTGAGCGCGTTCGTACTGTTTCTCGGCGTTCACGCGCTGGAGAGCTACATCCTGACG
CCGCTGATCCAGCGTCAGGCGATCGACATTCCGCCGGCGACACTGTTCGCCATGCAGATCCTGCTCGGCATCGTATTCGG
GCTGTGGGGGCTGGCGATGGCGCTGCCGCTGATGGCGATCGGACGAGTCGTGATCAACCATCTTCGCGCGGAGCCGACCC
CCGAAATGGTCAGCGCCGCACCGCCGGCGGTGCTGGCCGCTAGCCCGGAATCGTGA

Upstream 100 bases:

>100_bases
TCCGGGTGTCCCAAAAATGACGCCGGCGATCTCGCGTGGCCCGCTTGCGTCGCGCGCAATTTGAAGAAATGCTCAGCCGC
CCCTTCATAGGAATTGCCCC

Downstream 100 bases:

>100_bases
CGACCGTATCGGTGTGCTCGACCTCGGGCGGCGAGGCGAAGAATCCACTGACCAGGCCGCGCCACTCGGTGAAATTCTCG
GAGCCGCGGAAGTCGACGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 391; Mature: 390

Protein sequence:

>391_residues
MTVPVIDRFQARNDLAWAIAIGGISTVAFGALLYTSWHFAGTLFLIFAGILFGVFLNALTDLAGKVVGGPHGLRLALVCC
VLTVMFIGIAVLGGNTIAQQATALSGTIKAQIVNAKTFLERQGVDTSFMELNVVANAANSANAGSTAAEQQPLPQPRNLP
SAGDLASGGGAIVSQTLKLILGTIGAVGNFFIVMFLGLAFAAQPDVYRRGLERVAPLRYRAQASAIVGDTGDMLKRWLLA
QLITMSAVFAVTATGLSLIGIPGAFILGIQAGLLAFIPTVGAILGGLVIVLAAIGSGWFAVVSAFVLFLGVHALESYILT
PLIQRQAIDIPPATLFAMQILLGIVFGLWGLAMALPLMAIGRVVINHLRAEPTPEMVSAAPPAVLAASPES

Sequences:

>Translated_391_residues
MTVPVIDRFQARNDLAWAIAIGGISTVAFGALLYTSWHFAGTLFLIFAGILFGVFLNALTDLAGKVVGGPHGLRLALVCC
VLTVMFIGIAVLGGNTIAQQATALSGTIKAQIVNAKTFLERQGVDTSFMELNVVANAANSANAGSTAAEQQPLPQPRNLP
SAGDLASGGGAIVSQTLKLILGTIGAVGNFFIVMFLGLAFAAQPDVYRRGLERVAPLRYRAQASAIVGDTGDMLKRWLLA
QLITMSAVFAVTATGLSLIGIPGAFILGIQAGLLAFIPTVGAILGGLVIVLAAIGSGWFAVVSAFVLFLGVHALESYILT
PLIQRQAIDIPPATLFAMQILLGIVFGLWGLAMALPLMAIGRVVINHLRAEPTPEMVSAAPPAVLAASPES
>Mature_390_residues
TVPVIDRFQARNDLAWAIAIGGISTVAFGALLYTSWHFAGTLFLIFAGILFGVFLNALTDLAGKVVGGPHGLRLALVCCV
LTVMFIGIAVLGGNTIAQQATALSGTIKAQIVNAKTFLERQGVDTSFMELNVVANAANSANAGSTAAEQQPLPQPRNLPS
AGDLASGGGAIVSQTLKLILGTIGAVGNFFIVMFLGLAFAAQPDVYRRGLERVAPLRYRAQASAIVGDTGDMLKRWLLAQ
LITMSAVFAVTATGLSLIGIPGAFILGIQAGLLAFIPTVGAILGGLVIVLAAIGSGWFAVVSAFVLFLGVHALESYILTP
LIQRQAIDIPPATLFAMQILLGIVFGLWGLAMALPLMAIGRVVINHLRAEPTPEMVSAAPPAVLAASPES

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40509; Mature: 40377

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVPVIDRFQARNDLAWAIAIGGISTVAFGALLYTSWHFAGTLFLIFAGILFGVFLNALT
CCCCCHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DLAGKVVGGPHGLRLALVCCVLTVMFIGIAVLGGNTIAQQATALSGTIKAQIVNAKTFLE
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEHHHHHHH
RQGVDTSFMELNVVANAANSANAGSTAAEQQPLPQPRNLPSAGDLASGGGAIVSQTLKLI
HCCCCHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
LGTIGAVGNFFIVMFLGLAFAAQPDVYRRGLERVAPLRYRAQASAIVGDTGDMLKRWLLA
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHH
QLITMSAVFAVTATGLSLIGIPGAFILGIQAGLLAFIPTVGAILGGLVIVLAAIGSGWFA
HHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
VVSAFVLFLGVHALESYILTPLIQRQAIDIPPATLFAMQILLGIVFGLWGLAMALPLMAI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GRVVINHLRAEPTPEMVSAAPPAVLAASPES
HHHHHHHHCCCCCHHHHHCCCCCEEECCCCC
>Mature Secondary Structure 
TVPVIDRFQARNDLAWAIAIGGISTVAFGALLYTSWHFAGTLFLIFAGILFGVFLNALT
CCCCHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DLAGKVVGGPHGLRLALVCCVLTVMFIGIAVLGGNTIAQQATALSGTIKAQIVNAKTFLE
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEHHHHHHH
RQGVDTSFMELNVVANAANSANAGSTAAEQQPLPQPRNLPSAGDLASGGGAIVSQTLKLI
HCCCCHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
LGTIGAVGNFFIVMFLGLAFAAQPDVYRRGLERVAPLRYRAQASAIVGDTGDMLKRWLLA
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHH
QLITMSAVFAVTATGLSLIGIPGAFILGIQAGLLAFIPTVGAILGGLVIVLAAIGSGWFA
HHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
VVSAFVLFLGVHALESYILTPLIQRQAIDIPPATLFAMQILLGIVFGLWGLAMALPLMAI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GRVVINHLRAEPTPEMVSAAPPAVLAASPES
HHHHHHHHCCCCCHHHHHCCCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA