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The map label for this gene is 86749739

Identifier: 86749739

GI number: 86749739

Start: 3004944

End: 3005486

Strand: Reverse

Name: 86749739

Synonym: RPB_2622

Alternate gene names: NA

Gene position: 3005486-3004944 (Counterclockwise)

Preceding gene: 86749740

Following gene: 86749738

Centisome position: 56.37

GC content: 63.72

Gene sequence:

>543_bases
ATGTCTGACTACGGTTCGAACGGGCCTGGTGCGCGTGGAAATGCCGGCTGGCGCGACGAGGGGGAAACCTTCGATCCCTG
GCGCAATCCGGAGCTATTCCAGGGTGTGCTGACCAAGCGCGTGTTCGCTTTCCTGATAGACTTGGTGGTGTTGTCGATCC
CGGTGATTCTCGCCATCGTCTTCATCACGGTGTTCGGCGTGATCACGCTGGGGCTGGGCTGGACGCTGTTCTGGATCGTG
TCGCCGGCCTCGGTGATCTGGGCGCTGATCTATTACGGCGCGTCGCTCGGCGGGCCGTATTCGGCGACGCTCGGCATGCG
GGCGATGGGTATCGAGATGGCGACGTGGACCGGCGAGCCGGGCTATTTCGTGCTCGGCGCAGTGCACGCTTTCTTGTTCT
GGCTGTCGGTATCGATGCTGACGCCGCTGGTGCTACTGGTCGGCCTGTTCAACGGCCGCCGCCGGCTGCTGCACGATATC
GTGCTCGGGACGGTGGTGATCAACAGCATGGCGGTCGCGTCACAGCCGGCGCGGTCGTACTGA

Upstream 100 bases:

>100_bases
GTTGCCGCTCTGTAATGTCGCGGCGGCCTTGCAACGCATGCCGACCGTCGCCATTTCCAGCGCGTCGTGATTTGCGGCGC
GAAGCAAGGGAGCGAGGGTC

Downstream 100 bases:

>100_bases
AACACCAAAGCGATTGACCGGAGGCGGTCGTGGCGCGATGCTGTGTCGCGGTGGAGGTTGACGGACCGACGTGACACAGC
ACTCGCGCGACACCCCGCAG

Product: RDD

Products: NA

Alternate protein names: RDD Domain Containing Protein; Transmembrane Protein; RDD Family; RDD Family Protein

Number of amino acids: Translated: 180; Mature: 179

Protein sequence:

>180_residues
MSDYGSNGPGARGNAGWRDEGETFDPWRNPELFQGVLTKRVFAFLIDLVVLSIPVILAIVFITVFGVITLGLGWTLFWIV
SPASVIWALIYYGASLGGPYSATLGMRAMGIEMATWTGEPGYFVLGAVHAFLFWLSVSMLTPLVLLVGLFNGRRRLLHDI
VLGTVVINSMAVASQPARSY

Sequences:

>Translated_180_residues
MSDYGSNGPGARGNAGWRDEGETFDPWRNPELFQGVLTKRVFAFLIDLVVLSIPVILAIVFITVFGVITLGLGWTLFWIV
SPASVIWALIYYGASLGGPYSATLGMRAMGIEMATWTGEPGYFVLGAVHAFLFWLSVSMLTPLVLLVGLFNGRRRLLHDI
VLGTVVINSMAVASQPARSY
>Mature_179_residues
SDYGSNGPGARGNAGWRDEGETFDPWRNPELFQGVLTKRVFAFLIDLVVLSIPVILAIVFITVFGVITLGLGWTLFWIVS
PASVIWALIYYGASLGGPYSATLGMRAMGIEMATWTGEPGYFVLGAVHAFLFWLSVSMLTPLVLLVGLFNGRRRLLHDIV
LGTVVINSMAVASQPARSY

Specific function: Unknown

COG id: COG1714

COG function: function code S; Predicted membrane protein/domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19601; Mature: 19470

Theoretical pI: Translated: 7.68; Mature: 7.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDYGSNGPGARGNAGWRDEGETFDPWRNPELFQGVLTKRVFAFLIDLVVLSIPVILAIV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FITVFGVITLGLGWTLFWIVSPASVIWALIYYGASLGGPYSATLGMRAMGIEMATWTGEP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEECCCC
GYFVLGAVHAFLFWLSVSMLTPLVLLVGLFNGRRRLLHDIVLGTVVINSMAVASQPARSY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SDYGSNGPGARGNAGWRDEGETFDPWRNPELFQGVLTKRVFAFLIDLVVLSIPVILAIV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FITVFGVITLGLGWTLFWIVSPASVIWALIYYGASLGGPYSATLGMRAMGIEMATWTGEP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEECCCC
GYFVLGAVHAFLFWLSVSMLTPLVLLVGLFNGRRRLLHDIVLGTVVINSMAVASQPARSY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA