| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
Click here to switch to the map view.
The map label for this gene is ate [H]
Identifier: 86749738
GI number: 86749738
Start: 3004100
End: 3004873
Strand: Reverse
Name: ate [H]
Synonym: RPB_2621
Alternate gene names: 86749738
Gene position: 3004873-3004100 (Counterclockwise)
Preceding gene: 86749739
Following gene: 86749735
Centisome position: 56.36
GC content: 66.15
Gene sequence:
>774_bases GTGACACAGCACTCGCGCGACACCCCGCAGTTCTATCTGACGGCACCCTCGCCCTGCCCGTATCTACCGGGCCGGCACGA GCGCAAGGTCTTCACCCATCTGGTCGGCAACAAGGCCGGCGAGTTGAACGACCTTCTCACCCATGGCGGCTTCCGCCGCA GCCAGTCGATCGCCTACCGCCCCGCCTGCGACCAGTGCCGATCGTGCGTTTCGGTCCGCGTCGTCGCCAACGAATTCCGG ACCTCGCGCAACCAGCGCAAGATCCTCGCCCGCAACGCCGACATCGTCGGCGAACAGCGCAATCCGGTGCCGACGTCGGA GCAGTATTCGGTGTTCCGCGCCTATCTCGACCAGCGCCATCGCCACGGCGGCATGGCCGACATGACCGTGCTGGACTACG CGATGATGGTCGAGGACAGCCATGTCGAGACCCGGATCATCGAGTATCGTAAGCGGACCCCCGACACCGGCATCACCGGC CGCGGCGGCGATCTGATCGCCGCGGCGCTGACCGACGTGCTGGGTGACGGGCTGTCGATGGTGTACTCGTTCTACGAGCC GGGCGAACAGAACCGCTCGCTAGGTACCTTCATGATCCTCGACCACATCGCCCGCGCCCGCCGGCTCGGGCTGCCCTACG TCTATCTCGGCTACTGGATCGAAGGCTCCAAGAAGATGGACTACAAGGGCCGCTATCTGCCGCAGCAGCGCCTGGCCTCC AGCGGCTGGATCCGCATCGACGCGTCGGGCGAGCATCCGGAGCCGCAGGACTAG
Upstream 100 bases:
>100_bases GTCGCGTCACAGCCGGCGCGGTCGTACTGAAACACCAAAGCGATTGACCGGAGGCGGTCGTGGCGCGATGCTGTGTCGCG GTGGAGGTTGACGGACCGAC
Downstream 100 bases:
>100_bases AGCTTTTCCGGTTCTGATCGAATCAGAACCGGAGCTTTGGATTTGGCGCCACCCGCCGGTCGCGAAGGCGTAGGAGACCA GCTTTGCCGAGATCGAACCG
Product: arginyl-tRNA-protein transferase
Products: NA
Alternate protein names: Arginyltransferase; R-transferase [H]
Number of amino acids: Translated: 257; Mature: 256
Protein sequence:
>257_residues MTQHSRDTPQFYLTAPSPCPYLPGRHERKVFTHLVGNKAGELNDLLTHGGFRRSQSIAYRPACDQCRSCVSVRVVANEFR TSRNQRKILARNADIVGEQRNPVPTSEQYSVFRAYLDQRHRHGGMADMTVLDYAMMVEDSHVETRIIEYRKRTPDTGITG RGGDLIAAALTDVLGDGLSMVYSFYEPGEQNRSLGTFMILDHIARARRLGLPYVYLGYWIEGSKKMDYKGRYLPQQRLAS SGWIRIDASGEHPEPQD
Sequences:
>Translated_257_residues MTQHSRDTPQFYLTAPSPCPYLPGRHERKVFTHLVGNKAGELNDLLTHGGFRRSQSIAYRPACDQCRSCVSVRVVANEFR TSRNQRKILARNADIVGEQRNPVPTSEQYSVFRAYLDQRHRHGGMADMTVLDYAMMVEDSHVETRIIEYRKRTPDTGITG RGGDLIAAALTDVLGDGLSMVYSFYEPGEQNRSLGTFMILDHIARARRLGLPYVYLGYWIEGSKKMDYKGRYLPQQRLAS SGWIRIDASGEHPEPQD >Mature_256_residues TQHSRDTPQFYLTAPSPCPYLPGRHERKVFTHLVGNKAGELNDLLTHGGFRRSQSIAYRPACDQCRSCVSVRVVANEFRT SRNQRKILARNADIVGEQRNPVPTSEQYSVFRAYLDQRHRHGGMADMTVLDYAMMVEDSHVETRIIEYRKRTPDTGITGR GGDLIAAALTDVLGDGLSMVYSFYEPGEQNRSLGTFMILDHIARARRLGLPYVYLGYWIEGSKKMDYKGRYLPQQRLASS GWIRIDASGEHPEPQD
Specific function: May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate (Potential) [H]
COG id: COG2935
COG function: function code O; Putative arginyl-tRNA:protein arginylyltransferase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the R-transferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016181 - InterPro: IPR007472 - InterPro: IPR017138 - InterPro: IPR007471 [H]
Pfam domain/function: PF04377 ATE_C; PF04376 ATE_N [H]
EC number: =2.3.2.8 [H]
Molecular weight: Translated: 29199; Mature: 29068
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQHSRDTPQFYLTAPSPCPYLPGRHERKVFTHLVGNKAGELNDLLTHGGFRRSQSIAYR CCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCEEC PACDQCRSCVSVRVVANEFRTSRNQRKILARNADIVGEQRNPVPTSEQYSVFRAYLDQRH CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHH RHGGMADMTVLDYAMMVEDSHVETRIIEYRKRTPDTGITGRGGDLIAAALTDVLGDGLSM HCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHH VYSFYEPGEQNRSLGTFMILDHIARARRLGLPYVYLGYWIEGSKKMDYKGRYLPQQRLAS HHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCHHHHCC SGWIRIDASGEHPEPQD CCCEEEECCCCCCCCCC >Mature Secondary Structure TQHSRDTPQFYLTAPSPCPYLPGRHERKVFTHLVGNKAGELNDLLTHGGFRRSQSIAYR CCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCEEC PACDQCRSCVSVRVVANEFRTSRNQRKILARNADIVGEQRNPVPTSEQYSVFRAYLDQRH CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHH RHGGMADMTVLDYAMMVEDSHVETRIIEYRKRTPDTGITGRGGDLIAAALTDVLGDGLSM HCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHH VYSFYEPGEQNRSLGTFMILDHIARARRLGLPYVYLGYWIEGSKKMDYKGRYLPQQRLAS HHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCHHHHCC SGWIRIDASGEHPEPQD CCCEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA