| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is qorB [H]
Identifier: 86749735
GI number: 86749735
Start: 3000159
End: 3001043
Strand: Reverse
Name: qorB [H]
Synonym: RPB_2618
Alternate gene names: 86749735
Gene position: 3001043-3000159 (Counterclockwise)
Preceding gene: 86749738
Following gene: 86749724
Centisome position: 56.29
GC content: 71.3
Gene sequence:
>885_bases ATGTCTTCCCCCCGTTTTCTCGTCACCGGCGCCAACGGCCAACTCGGCCGTCGCGTCATCGATACCCTTCTCGGGACCAT ATCGGCCCCGCAGATCAGCGCCCTGGTCCGCGGTGCCGACGCCGCCGCCGCGCTGTCGGCCCGCGGCATTCAGGCCCATG TCGGCGATTACGGCCGCCCGGAGACGCTCGCGCCGGCCCTCGCCGGGGTCGATCGGGTGCTGCTGATCTCATCCAGCGAG ATCGGTCGGCGCACGCCGCAGCATCGCAACGTGATCGCGGCCGCCCGCGAGGCCGGGGTCCAGTTCCTCGCCTACACCAG CCTGCTGCATGCCGACATCTCGCCGCTCGGCCTCGCCGAAGAGCATCGCCAGACCGAAGCAGCGCTCCGCGAGTCCGGCG TGCCGTTCGCGCTGCTGCGCAACGGCTGGTACACCGAGAATTATGCCGCCTCGATCCCCGCCGCGCTGGCGCACAGCGCG CTGCTCGGCAGCGCCGGCGACGGACGGATTTCATCGGCATCGCGGGCCGACTATGCGGCGGCGGCCGCCGCGGTGCTGAC CGCGGACACGCCGGCCGCCAACCAAGTCTACGAACTCGCCGGCGATGAGGCCTACACGCTGACCGAGTTCGCCGCCGAGA TCGCGCGGCAGTCCGGCAAGGCCGTCGCCTACCGCGATCTGCCCGAGGCCGACTACAAGGCCGCGCTGCTCGGCGCCGGC CTGCCGGAGCCGTTTGCGGCACTGCTGGCCGACTCCGACGCCGGCGCCGCCAAGGACGCGCTGTTCGACGACAGCCGCAC CCTCAGCCGCCTGATCGGCCGCCCGACCACGCCGTATGCCGAAACGATAGGCGACACGTTGAAGGCATCAAGGCCTGAGC GCTAG
Upstream 100 bases:
>100_bases CAGGTGACCTGGACATCAAAAACTGCCTCCTTACGCGATCCTTCGATGGTCTCAATTATAGACCTACTCTCAATCGGACA TCAACTCTCGGAGCTTCGCG
Downstream 100 bases:
>100_bases GTTCTTCCGATCAGGCCACGCATCAATTCGGACAAGGCAGCCCGCGTCTCCGCCCGGAATTTCCGGCGTGGAGCCGCGAG CTGCTGCAGCACGATCCCCA
Product: NmrA-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 294; Mature: 293
Protein sequence:
>294_residues MSSPRFLVTGANGQLGRRVIDTLLGTISAPQISALVRGADAAAALSARGIQAHVGDYGRPETLAPALAGVDRVLLISSSE IGRRTPQHRNVIAAAREAGVQFLAYTSLLHADISPLGLAEEHRQTEAALRESGVPFALLRNGWYTENYAASIPAALAHSA LLGSAGDGRISSASRADYAAAAAAVLTADTPAANQVYELAGDEAYTLTEFAAEIARQSGKAVAYRDLPEADYKAALLGAG LPEPFAALLADSDAGAAKDALFDDSRTLSRLIGRPTTPYAETIGDTLKASRPER
Sequences:
>Translated_294_residues MSSPRFLVTGANGQLGRRVIDTLLGTISAPQISALVRGADAAAALSARGIQAHVGDYGRPETLAPALAGVDRVLLISSSE IGRRTPQHRNVIAAAREAGVQFLAYTSLLHADISPLGLAEEHRQTEAALRESGVPFALLRNGWYTENYAASIPAALAHSA LLGSAGDGRISSASRADYAAAAAAVLTADTPAANQVYELAGDEAYTLTEFAAEIARQSGKAVAYRDLPEADYKAALLGAG LPEPFAALLADSDAGAAKDALFDDSRTLSRLIGRPTTPYAETIGDTLKASRPER >Mature_293_residues SSPRFLVTGANGQLGRRVIDTLLGTISAPQISALVRGADAAAALSARGIQAHVGDYGRPETLAPALAGVDRVLLISSSEI GRRTPQHRNVIAAAREAGVQFLAYTSLLHADISPLGLAEEHRQTEAALRESGVPFALLRNGWYTENYAASIPAALAHSAL LGSAGDGRISSASRADYAAAAAAVLTADTPAANQVYELAGDEAYTLTEFAAEIARQSGKAVAYRDLPEADYKAALLGAGL PEPFAALLADSDAGAAKDALFDDSRTLSRLIGRPTTPYAETIGDTLKASRPER
Specific function: Quinone oxidoreductase that may play some additional role beyond quinone reduction. Potential redox sensor protein. Overexpression induces retardation of growth [H]
COG id: COG0702
COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NmrA-type oxidoreductase family [H]
Homologues:
Organism=Escherichia coli, GI1790656, Length=276, Percent_Identity=59.7826086956522, Blast_Score=310, Evalue=7e-86,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR008030 [H]
Pfam domain/function: PF05368 NmrA [H]
EC number: =1.6.5.2 [H]
Molecular weight: Translated: 30563; Mature: 30432
Theoretical pI: Translated: 5.38; Mature: 5.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSPRFLVTGANGQLGRRVIDTLLGTISAPQISALVRGADAAAALSARGIQAHVGDYGRP CCCCCEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHCCCHHHCCCCCCC ETLAPALAGVDRVLLISSSEIGRRTPQHRNVIAAAREAGVQFLAYTSLLHADISPLGLAE HHHHHHHHCCCEEEEECCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH EHRQTEAALRESGVPFALLRNGWYTENYAASIPAALAHSALLGSAGDGRISSASRADYAA HHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH AAAAVLTADTPAANQVYELAGDEAYTLTEFAAEIARQSGKAVAYRDLPEADYKAALLGAG HHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHCCC LPEPFAALLADSDAGAAKDALFDDSRTLSRLIGRPTTPYAETIGDTLKASRPER CCHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCC >Mature Secondary Structure SSPRFLVTGANGQLGRRVIDTLLGTISAPQISALVRGADAAAALSARGIQAHVGDYGRP CCCCEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHCCCHHHCCCCCCC ETLAPALAGVDRVLLISSSEIGRRTPQHRNVIAAAREAGVQFLAYTSLLHADISPLGLAE HHHHHHHHCCCEEEEECCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH EHRQTEAALRESGVPFALLRNGWYTENYAASIPAALAHSALLGSAGDGRISSASRADYAA HHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH AAAAVLTADTPAANQVYELAGDEAYTLTEFAAEIARQSGKAVAYRDLPEADYKAALLGAG HHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHCCC LPEPFAALLADSDAGAAKDALFDDSRTLSRLIGRPTTPYAETIGDTLKASRPER CCHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]