Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

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The map label for this gene is qorB [H]

Identifier: 86749735

GI number: 86749735

Start: 3000159

End: 3001043

Strand: Reverse

Name: qorB [H]

Synonym: RPB_2618

Alternate gene names: 86749735

Gene position: 3001043-3000159 (Counterclockwise)

Preceding gene: 86749738

Following gene: 86749724

Centisome position: 56.29

GC content: 71.3

Gene sequence:

>885_bases
ATGTCTTCCCCCCGTTTTCTCGTCACCGGCGCCAACGGCCAACTCGGCCGTCGCGTCATCGATACCCTTCTCGGGACCAT
ATCGGCCCCGCAGATCAGCGCCCTGGTCCGCGGTGCCGACGCCGCCGCCGCGCTGTCGGCCCGCGGCATTCAGGCCCATG
TCGGCGATTACGGCCGCCCGGAGACGCTCGCGCCGGCCCTCGCCGGGGTCGATCGGGTGCTGCTGATCTCATCCAGCGAG
ATCGGTCGGCGCACGCCGCAGCATCGCAACGTGATCGCGGCCGCCCGCGAGGCCGGGGTCCAGTTCCTCGCCTACACCAG
CCTGCTGCATGCCGACATCTCGCCGCTCGGCCTCGCCGAAGAGCATCGCCAGACCGAAGCAGCGCTCCGCGAGTCCGGCG
TGCCGTTCGCGCTGCTGCGCAACGGCTGGTACACCGAGAATTATGCCGCCTCGATCCCCGCCGCGCTGGCGCACAGCGCG
CTGCTCGGCAGCGCCGGCGACGGACGGATTTCATCGGCATCGCGGGCCGACTATGCGGCGGCGGCCGCCGCGGTGCTGAC
CGCGGACACGCCGGCCGCCAACCAAGTCTACGAACTCGCCGGCGATGAGGCCTACACGCTGACCGAGTTCGCCGCCGAGA
TCGCGCGGCAGTCCGGCAAGGCCGTCGCCTACCGCGATCTGCCCGAGGCCGACTACAAGGCCGCGCTGCTCGGCGCCGGC
CTGCCGGAGCCGTTTGCGGCACTGCTGGCCGACTCCGACGCCGGCGCCGCCAAGGACGCGCTGTTCGACGACAGCCGCAC
CCTCAGCCGCCTGATCGGCCGCCCGACCACGCCGTATGCCGAAACGATAGGCGACACGTTGAAGGCATCAAGGCCTGAGC
GCTAG

Upstream 100 bases:

>100_bases
CAGGTGACCTGGACATCAAAAACTGCCTCCTTACGCGATCCTTCGATGGTCTCAATTATAGACCTACTCTCAATCGGACA
TCAACTCTCGGAGCTTCGCG

Downstream 100 bases:

>100_bases
GTTCTTCCGATCAGGCCACGCATCAATTCGGACAAGGCAGCCCGCGTCTCCGCCCGGAATTTCCGGCGTGGAGCCGCGAG
CTGCTGCAGCACGATCCCCA

Product: NmrA-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 293

Protein sequence:

>294_residues
MSSPRFLVTGANGQLGRRVIDTLLGTISAPQISALVRGADAAAALSARGIQAHVGDYGRPETLAPALAGVDRVLLISSSE
IGRRTPQHRNVIAAAREAGVQFLAYTSLLHADISPLGLAEEHRQTEAALRESGVPFALLRNGWYTENYAASIPAALAHSA
LLGSAGDGRISSASRADYAAAAAAVLTADTPAANQVYELAGDEAYTLTEFAAEIARQSGKAVAYRDLPEADYKAALLGAG
LPEPFAALLADSDAGAAKDALFDDSRTLSRLIGRPTTPYAETIGDTLKASRPER

Sequences:

>Translated_294_residues
MSSPRFLVTGANGQLGRRVIDTLLGTISAPQISALVRGADAAAALSARGIQAHVGDYGRPETLAPALAGVDRVLLISSSE
IGRRTPQHRNVIAAAREAGVQFLAYTSLLHADISPLGLAEEHRQTEAALRESGVPFALLRNGWYTENYAASIPAALAHSA
LLGSAGDGRISSASRADYAAAAAAVLTADTPAANQVYELAGDEAYTLTEFAAEIARQSGKAVAYRDLPEADYKAALLGAG
LPEPFAALLADSDAGAAKDALFDDSRTLSRLIGRPTTPYAETIGDTLKASRPER
>Mature_293_residues
SSPRFLVTGANGQLGRRVIDTLLGTISAPQISALVRGADAAAALSARGIQAHVGDYGRPETLAPALAGVDRVLLISSSEI
GRRTPQHRNVIAAAREAGVQFLAYTSLLHADISPLGLAEEHRQTEAALRESGVPFALLRNGWYTENYAASIPAALAHSAL
LGSAGDGRISSASRADYAAAAAAVLTADTPAANQVYELAGDEAYTLTEFAAEIARQSGKAVAYRDLPEADYKAALLGAGL
PEPFAALLADSDAGAAKDALFDDSRTLSRLIGRPTTPYAETIGDTLKASRPER

Specific function: Quinone oxidoreductase that may play some additional role beyond quinone reduction. Potential redox sensor protein. Overexpression induces retardation of growth [H]

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NmrA-type oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1790656, Length=276, Percent_Identity=59.7826086956522, Blast_Score=310, Evalue=7e-86,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR008030 [H]

Pfam domain/function: PF05368 NmrA [H]

EC number: =1.6.5.2 [H]

Molecular weight: Translated: 30563; Mature: 30432

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSPRFLVTGANGQLGRRVIDTLLGTISAPQISALVRGADAAAALSARGIQAHVGDYGRP
CCCCCEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHCCCHHHCCCCCCC
ETLAPALAGVDRVLLISSSEIGRRTPQHRNVIAAAREAGVQFLAYTSLLHADISPLGLAE
HHHHHHHHCCCEEEEECCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
EHRQTEAALRESGVPFALLRNGWYTENYAASIPAALAHSALLGSAGDGRISSASRADYAA
HHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
AAAAVLTADTPAANQVYELAGDEAYTLTEFAAEIARQSGKAVAYRDLPEADYKAALLGAG
HHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHCCC
LPEPFAALLADSDAGAAKDALFDDSRTLSRLIGRPTTPYAETIGDTLKASRPER
CCHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SSPRFLVTGANGQLGRRVIDTLLGTISAPQISALVRGADAAAALSARGIQAHVGDYGRP
CCCCEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHCCCHHHCCCCCCC
ETLAPALAGVDRVLLISSSEIGRRTPQHRNVIAAAREAGVQFLAYTSLLHADISPLGLAE
HHHHHHHHCCCEEEEECCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
EHRQTEAALRESGVPFALLRNGWYTENYAASIPAALAHSALLGSAGDGRISSASRADYAA
HHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
AAAAVLTADTPAANQVYELAGDEAYTLTEFAAEIARQSGKAVAYRDLPEADYKAALLGAG
HHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHCCC
LPEPFAALLADSDAGAAKDALFDDSRTLSRLIGRPTTPYAETIGDTLKASRPER
CCHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]