| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is bla [H]
Identifier: 86749460
GI number: 86749460
Start: 2688566
End: 2689384
Strand: Direct
Name: bla [H]
Synonym: RPB_2340
Alternate gene names: 86749460
Gene position: 2688566-2689384 (Clockwise)
Preceding gene: 86749459
Following gene: 86749462
Centisome position: 50.43
GC content: 67.77
Gene sequence:
>819_bases TTGCTCACCCGCCGTTCCGCCCTCGGCCTCTGCGCCGCCGCCCTGCTACCCACCCCCCGGGCGTTTGCGGAGGTCGCGCC GCCGCGCAGTGAAATCCGCGCCAGCCTCGCCAAACGTTTCACCGACGAGGGCACGGCAGGGACTTTCGTCGGCTACAAGA CCGACGACTACCTGATCATCGCCAGCGATGCGCAGCGCTCCGGCGAAGCGTTCCTGCCGGCCTCGACCTTCAAGGTGCCG AACTCGCTGATCGCGCTCGAGACCGGCGTGGTCGGCGATCCGGACAAGGATGTGTTCAAGTGGGACGGCGTCACCCGCGG CATCGAGGCGTGGAATCGCGACCACACGCTGCGCAGCGCGATCGCGGCCTCGGCGGTGCCGGTGTATCAGGAGATCGCCC GCCGCATCGGCGCCGAGAGAATGCAGAACTACGTGAATTTGTTCGACTACGGCAACCGCAACATTGGCGGCGGCATCGAC CGGTTCTGGCTGACCGGCGATCTGCGGATCGACTGCATTCAGCAGATCGACTTCCTCGACCGGCTGCGCCGCCGCGCGCT GCCGATCGGAAAGCGCAGCCAGGATCTGGTCGTCGACATCCTGCCGGTGACGAAAGTCGGCGATGCGGTGATCCGCGCCA AGACCGGGCTGCTCGGCGCCGAGAAGGGCCAGCCGTCGCTCGGCTGGCTGGTCGGCTGGGCCGAGAAGGGCGATCGGCAG ACGGTGTTCGCGCTCAATCTCGACGCAAGCGAACCGCGCCACGCCGCGGCGCGGATGACGCTGGCGCAGAAGTGTCTGGC GGATATCGGCGCGATCTGA
Upstream 100 bases:
>100_bases CGCTCCTCGCAATGACGGTGAGGTTGATAGCTCGACGGCCATCGTTTCACCACGAGCCTCGCGCATCGTCCGCGCTTTAT CCATCCTCGAGGATCATCCA
Downstream 100 bases:
>100_bases ACGCTTAGTTCGCCTCGGCGGGACCGGCAGCGACGGGCTTGCGCTTGCCGAGCCGGCCGAGATGGGTGTCGTGGAAGCTC GATCCGTATTTCAGGCCGAA
Product: twin-arginine translocation pathway signal
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MLTRRSALGLCAAALLPTPRAFAEVAPPRSEIRASLAKRFTDEGTAGTFVGYKTDDYLIIASDAQRSGEAFLPASTFKVP NSLIALETGVVGDPDKDVFKWDGVTRGIEAWNRDHTLRSAIAASAVPVYQEIARRIGAERMQNYVNLFDYGNRNIGGGID RFWLTGDLRIDCIQQIDFLDRLRRRALPIGKRSQDLVVDILPVTKVGDAVIRAKTGLLGAEKGQPSLGWLVGWAEKGDRQ TVFALNLDASEPRHAAARMTLAQKCLADIGAI
Sequences:
>Translated_272_residues MLTRRSALGLCAAALLPTPRAFAEVAPPRSEIRASLAKRFTDEGTAGTFVGYKTDDYLIIASDAQRSGEAFLPASTFKVP NSLIALETGVVGDPDKDVFKWDGVTRGIEAWNRDHTLRSAIAASAVPVYQEIARRIGAERMQNYVNLFDYGNRNIGGGID RFWLTGDLRIDCIQQIDFLDRLRRRALPIGKRSQDLVVDILPVTKVGDAVIRAKTGLLGAEKGQPSLGWLVGWAEKGDRQ TVFALNLDASEPRHAAARMTLAQKCLADIGAI >Mature_272_residues MLTRRSALGLCAAALLPTPRAFAEVAPPRSEIRASLAKRFTDEGTAGTFVGYKTDDYLIIASDAQRSGEAFLPASTFKVP NSLIALETGVVGDPDKDVFKWDGVTRGIEAWNRDHTLRSAIAASAVPVYQEIARRIGAERMQNYVNLFDYGNRNIGGGID RFWLTGDLRIDCIQQIDFLDRLRRRALPIGKRSQDLVVDILPVTKVGDAVIRAKTGLLGAEKGQPSLGWLVGWAEKGDRQ TVFALNLDASEPRHAAARMTLAQKCLADIGAI
Specific function: Hydrolyzes both oxacillin and methicillin [H]
COG id: COG2602
COG function: function code V; Beta-lactamase class D
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-D beta-lactamase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR002137 - InterPro: IPR001460 [H]
Pfam domain/function: PF00905 Transpeptidase [H]
EC number: =3.5.2.6 [H]
Molecular weight: Translated: 29679; Mature: 29679
Theoretical pI: Translated: 9.16; Mature: 9.16
Prosite motif: PS00337 BETA_LACTAMASE_D
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTRRSALGLCAAALLPTPRAFAEVAPPRSEIRASLAKRFTDEGTAGTFVGYKTDDYLII CCCCHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEE ASDAQRSGEAFLPASTFKVPNSLIALETGVVGDPDKDVFKWDGVTRGIEAWNRDHTLRSA ECCCCCCCCEECCCHHHCCCCCEEEEECCCCCCCCCCCEEECCHHHHHHHHCCCHHHHHH IAASAVPVYQEIARRIGAERMQNYVNLFDYGNRNIGGGIDRFWLTGDLRIDCIQQIDFLD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHH RLRRRALPIGKRSQDLVVDILPVTKVGDAVIRAKTGLLGAEKGQPSLGWLVGWAEKGDRQ HHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCE TVFALNLDASEPRHAAARMTLAQKCLADIGAI EEEEEECCCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLTRRSALGLCAAALLPTPRAFAEVAPPRSEIRASLAKRFTDEGTAGTFVGYKTDDYLII CCCCHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEE ASDAQRSGEAFLPASTFKVPNSLIALETGVVGDPDKDVFKWDGVTRGIEAWNRDHTLRSA ECCCCCCCCEECCCHHHCCCCCEEEEECCCCCCCCCCCEEECCHHHHHHHHCCCHHHHHH IAASAVPVYQEIARRIGAERMQNYVNLFDYGNRNIGGGIDRFWLTGDLRIDCIQQIDFLD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHH RLRRRALPIGKRSQDLVVDILPVTKVGDAVIRAKTGLLGAEKGQPSLGWLVGWAEKGDRQ HHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCE TVFALNLDASEPRHAAARMTLAQKCLADIGAI EEEEEECCCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1495394 [H]