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The map label for this gene is ylqH [H]

Identifier: 86749459

GI number: 86749459

Start: 2688121

End: 2688390

Strand: Direct

Name: ylqH [H]

Synonym: RPB_2339

Alternate gene names: 86749459

Gene position: 2688121-2688390 (Clockwise)

Preceding gene: 86749458

Following gene: 86749460

Centisome position: 50.42

GC content: 63.33

Gene sequence:

>270_bases
GTGACCGTCAGTATCAAGAACCAGATCGCGGTCGCGCTGTACTACGACAAAGGCGGCGCGCCGCGCGTCGTCGCCAAGGG
CAGGGGCACGATCGGCGCCAAGATCATCGAGGTCGCGAAGGAGCACAATGTTCCGATCGAGGAGAACGAAGTGCTGGCCG
GGGCACTGTCGCATGTCGAACTCGGCGACGAGATCCCCGAAGAACTCTACAAGGCGGTGGCCGAGGTGCTGGTGTTCGTG
CTGAAACTGTCGGGCCGGACGCCGGGCTAA

Upstream 100 bases:

>100_bases
TCAGCCGCGCCGAACTGACGCCGGGCGACATCGTCATTCGCGACGGCGCGCCGACCGCGCCGCCGCCGGCTGCGGCCGGC
CATTTCCTGGATCGCGCGCT

Downstream 100 bases:

>100_bases
GCTTCTCGCCGTCATTGCGAGCGTAGCGAAGCAATCCAGCGCCGTGCATGGAGCCGCTGGATTGCTTCGTCGCTGCGCTC
CTCGCAATGACGGTGAGGTT

Product: type III secretion proteins, related to flagellar biosynthesis protein FlhB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 89; Mature: 88

Protein sequence:

>89_residues
MTVSIKNQIAVALYYDKGGAPRVVAKGRGTIGAKIIEVAKEHNVPIEENEVLAGALSHVELGDEIPEELYKAVAEVLVFV
LKLSGRTPG

Sequences:

>Translated_89_residues
MTVSIKNQIAVALYYDKGGAPRVVAKGRGTIGAKIIEVAKEHNVPIEENEVLAGALSHVELGDEIPEELYKAVAEVLVFV
LKLSGRTPG
>Mature_88_residues
TVSIKNQIAVALYYDKGGAPRVVAKGRGTIGAKIIEVAKEHNVPIEENEVLAGALSHVELGDEIPEELYKAVAEVLVFVL
KLSGRTPG

Specific function: Required For Formation Of The Rod Structure In The Basal Body Of The Flagellar Apparatus. Together With Flii And Flih, May Constitute The Export Apparatus Of Flagellin. [C]

COG id: COG2257

COG function: function code S; Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane. [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788188, Length=77, Percent_Identity=51.9480519480519, Blast_Score=68, Evalue=1e-13,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004683
- InterPro:   IPR006135 [H]

Pfam domain/function: PF01312 Bac_export_2 [H]

EC number: NA

Molecular weight: Translated: 9482; Mature: 9351

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVSIKNQIAVALYYDKGGAPRVVAKGRGTIGAKIIEVAKEHNVPIEENEVLAGALSHVE
CEEECCCCEEEEEEECCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
LGDEIPEELYKAVAEVLVFVLKLSGRTPG
CCCCCHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TVSIKNQIAVALYYDKGGAPRVVAKGRGTIGAKIIEVAKEHNVPIEENEVLAGALSHVE
EEECCCCEEEEEEECCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
LGDEIPEELYKAVAEVLVFVLKLSGRTPG
CCCCCHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]