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The map label for this gene is frc [H]

Identifier: 86749225

GI number: 86749225

Start: 2392867

End: 2394081

Strand: Direct

Name: frc [H]

Synonym: RPB_2104

Alternate gene names: 86749225

Gene position: 2392867-2394081 (Clockwise)

Preceding gene: 86749223

Following gene: 86749226

Centisome position: 44.88

GC content: 68.56

Gene sequence:

>1215_bases
ATGGGGCCACTCGCAGGCGTGACGATCGTCGACATGACGTCGGTGCTGATGGGGCCTTACGCGACCCAGATGCTGGGCGA
TTACGGCGCGGATGTCGTCAAGATCGAGTCCCCCGACGGCGACGTCACGCGGCAGATCGGCCCGGCGCGGAATCCCGGCA
TGGGACCGGTGTTCCTCAATGCCAACCGCAACAAGCGCAGCATCTGCCTCGATCTCAAACACGCCGCCGGCCGCGACGCC
GCGCTGCGGCTGATTGCGGGCGCCGACGTGCTGGTGTACAACGTGCGTCCGCAGGCGATGGCGCGGCTGCGGCTCGGCTA
TGACGAGGTCGCGGCGATCAATCCGCGGCTGATCTATGCCGGGCTGTTCGGCTTCGGCCAGGACGGACCCTATGCGGCCA
AACCCGCTTATGACGATCTAATCCAGGGCGCGACAGCGCTGCCGGCGCTGAACGCGCGTATCGGTGACGGCACGCCGCGC
TACGTGCCTAACGCGCTGGTCGACCGCATCGTCGGGCTCACCGCGGTCGGCGCGATCTGCGCCGCGCTGGTGCATCGCGA
CCGCACTGGACAGGGGCAGCGCGTCGGCGTCCCGATGTTCGAGACGATGGCGGGCTTCGTGATGGGTGATCATCTCGGCG
GGCTCACCTACGAGCCGCCGCTCGATCGCGGCGGCTATGCCCGGCACCTGTCGCCGGACCGCCGGCCGTACCAGACCGCC
GACGGCTACATCTGCGCGATGGTGTACAACGACAAGCAGTGGGGCAGCTTCCTGCGCGCGATCGGCCGCGACGATCTGCT
GAGCGACGAGCGTTACACGTCGTTCGCCAAGCGCGCCGTGAACATCGACGTGGTCTATGCCGAGCTGGCGCGGATCTTCC
TGACGCGCAGCACGGCGGAGTGGACGGAACTGCTCGATGCCGCCGACGTGCCGGCGATGCGGATGCACGATCTCGAAAGC
CTGCTCGACGATCCGCATCTGGTCGCGACCGATTTCTTCCCCGTCGTCGATCATCCGAGCGAAGGCCCGATCCGCGACAT
GAGAGTCTCGGCGACCTTTGCGGCGACGCCCGTCGCGCGCCAGCGCCTCGCGCCGCGCTTGGGCGAGCAGGGGGCGGAGG
TGCTGCGCGAGGCCGGCTACAGCGACGACGAGATCGAGGCGCTGGCTGGATGCGGCGCGTTGAAGCTGCCGGCGGCGGGC
AAGGTGGCGAGTTGA

Upstream 100 bases:

>100_bases
ATGCGGCCGGGCGCGCTTGATCTTCGCGCGCGCTCCACGCTACACGGGAACGACGGCGCCCCGAGAGCGCCGCTATCCGC
ACCGGGGAGCGATCGCGACG

Downstream 100 bases:

>100_bases
ATCGATGCGCGTGATCGCTGACCATCGCAGACACCCTCTCGTTCGTCATTCCGGGGCGCGCGTAGCGCGAACCCGGAATC
CATACTCCCGGCGGTGGCTA

Product: L-carnitine dehydratase/bile acid-inducible protein F

Products: NA

Alternate protein names: Formyl-CoA transferase [H]

Number of amino acids: Translated: 404; Mature: 403

Protein sequence:

>404_residues
MGPLAGVTIVDMTSVLMGPYATQMLGDYGADVVKIESPDGDVTRQIGPARNPGMGPVFLNANRNKRSICLDLKHAAGRDA
ALRLIAGADVLVYNVRPQAMARLRLGYDEVAAINPRLIYAGLFGFGQDGPYAAKPAYDDLIQGATALPALNARIGDGTPR
YVPNALVDRIVGLTAVGAICAALVHRDRTGQGQRVGVPMFETMAGFVMGDHLGGLTYEPPLDRGGYARHLSPDRRPYQTA
DGYICAMVYNDKQWGSFLRAIGRDDLLSDERYTSFAKRAVNIDVVYAELARIFLTRSTAEWTELLDAADVPAMRMHDLES
LLDDPHLVATDFFPVVDHPSEGPIRDMRVSATFAATPVARQRLAPRLGEQGAEVLREAGYSDDEIEALAGCGALKLPAAG
KVAS

Sequences:

>Translated_404_residues
MGPLAGVTIVDMTSVLMGPYATQMLGDYGADVVKIESPDGDVTRQIGPARNPGMGPVFLNANRNKRSICLDLKHAAGRDA
ALRLIAGADVLVYNVRPQAMARLRLGYDEVAAINPRLIYAGLFGFGQDGPYAAKPAYDDLIQGATALPALNARIGDGTPR
YVPNALVDRIVGLTAVGAICAALVHRDRTGQGQRVGVPMFETMAGFVMGDHLGGLTYEPPLDRGGYARHLSPDRRPYQTA
DGYICAMVYNDKQWGSFLRAIGRDDLLSDERYTSFAKRAVNIDVVYAELARIFLTRSTAEWTELLDAADVPAMRMHDLES
LLDDPHLVATDFFPVVDHPSEGPIRDMRVSATFAATPVARQRLAPRLGEQGAEVLREAGYSDDEIEALAGCGALKLPAAG
KVAS
>Mature_403_residues
GPLAGVTIVDMTSVLMGPYATQMLGDYGADVVKIESPDGDVTRQIGPARNPGMGPVFLNANRNKRSICLDLKHAAGRDAA
LRLIAGADVLVYNVRPQAMARLRLGYDEVAAINPRLIYAGLFGFGQDGPYAAKPAYDDLIQGATALPALNARIGDGTPRY
VPNALVDRIVGLTAVGAICAALVHRDRTGQGQRVGVPMFETMAGFVMGDHLGGLTYEPPLDRGGYARHLSPDRRPYQTAD
GYICAMVYNDKQWGSFLRAIGRDDLLSDERYTSFAKRAVNIDVVYAELARIFLTRSTAEWTELLDAADVPAMRMHDLESL
LDDPHLVATDFFPVVDHPSEGPIRDMRVSATFAATPVARQRLAPRLGEQGAEVLREAGYSDDEIEALAGCGALKLPAAGK
VAS

Specific function: Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate [H]

COG id: COG1804

COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CaiB/BaiF CoA-transferase family [H]

Homologues:

Organism=Homo sapiens, GI300863128, Length=384, Percent_Identity=29.1666666666667, Blast_Score=176, Evalue=3e-44,
Organism=Homo sapiens, GI300863124, Length=370, Percent_Identity=28.9189189189189, Blast_Score=166, Evalue=4e-41,
Organism=Homo sapiens, GI300863126, Length=384, Percent_Identity=25.78125, Blast_Score=145, Evalue=5e-35,
Organism=Homo sapiens, GI13376042, Length=370, Percent_Identity=25.6756756756757, Blast_Score=129, Evalue=5e-30,
Organism=Homo sapiens, GI42794625, Length=400, Percent_Identity=28.75, Blast_Score=117, Evalue=2e-26,
Organism=Homo sapiens, GI266456254, Length=400, Percent_Identity=28.75, Blast_Score=117, Evalue=2e-26,
Organism=Homo sapiens, GI266458393, Length=257, Percent_Identity=32.295719844358, Blast_Score=94, Evalue=3e-19,
Organism=Homo sapiens, GI266458397, Length=257, Percent_Identity=32.295719844358, Blast_Score=93, Evalue=4e-19,
Organism=Homo sapiens, GI42822893, Length=137, Percent_Identity=35.036496350365, Blast_Score=79, Evalue=7e-15,
Organism=Homo sapiens, GI266458395, Length=137, Percent_Identity=35.036496350365, Blast_Score=79, Evalue=8e-15,
Organism=Escherichia coli, GI1788717, Length=418, Percent_Identity=31.1004784688995, Blast_Score=169, Evalue=2e-43,
Organism=Escherichia coli, GI87082093, Length=312, Percent_Identity=31.4102564102564, Blast_Score=155, Evalue=5e-39,
Organism=Escherichia coli, GI1786222, Length=410, Percent_Identity=26.5853658536585, Blast_Score=105, Evalue=5e-24,
Organism=Drosophila melanogaster, GI24648431, Length=390, Percent_Identity=31.5384615384615, Blast_Score=185, Evalue=6e-47,
Organism=Drosophila melanogaster, GI24585488, Length=420, Percent_Identity=27.1428571428571, Blast_Score=108, Evalue=7e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003673
- InterPro:   IPR017659 [H]

Pfam domain/function: PF02515 CoA_transf_3 [H]

EC number: =2.8.3.16 [H]

Molecular weight: Translated: 43470; Mature: 43339

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGPLAGVTIVDMTSVLMGPYATQMLGDYGADVVKIESPDGDVTRQIGPARNPGMGPVFLN
CCCCCCCHHHHHHHHHHCHHHHHHHHHCCCCEEEEECCCCCHHHCCCCCCCCCCCEEEEE
ANRNKRSICLDLKHAAGRDAALRLIAGADVLVYNVRPQAMARLRLGYDEVAAINPRLIYA
CCCCCCEEEEEECCCCCCHHHEEEEECCEEEEEECCHHHHHHHHCCCHHHHHCCCEEEEE
GLFGFGQDGPYAAKPAYDDLIQGATALPALNARIGDGTPRYVPNALVDRIVGLTAVGAIC
EECCCCCCCCCCCCCCHHHHHCCCHHCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
AALVHRDRTGQGQRVGVPMFETMAGFVMGDHLGGLTYEPPLDRGGYARHLSPDRRPYQTA
HHHHHCCCCCCCCEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DGYICAMVYNDKQWGSFLRAIGRDDLLSDERYTSFAKRAVNIDVVYAELARIFLTRSTAE
CCEEEEEEECCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHH
WTELLDAADVPAMRMHDLESLLDDPHLVATDFFPVVDHPSEGPIRDMRVSATFAATPVAR
HHHHHHHCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCEEEEEEHHCCHHHH
QRLAPRLGEQGAEVLREAGYSDDEIEALAGCGALKLPAAGKVAS
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCEECCCCCCCCC
>Mature Secondary Structure 
GPLAGVTIVDMTSVLMGPYATQMLGDYGADVVKIESPDGDVTRQIGPARNPGMGPVFLN
CCCCCCHHHHHHHHHHCHHHHHHHHHCCCCEEEEECCCCCHHHCCCCCCCCCCCEEEEE
ANRNKRSICLDLKHAAGRDAALRLIAGADVLVYNVRPQAMARLRLGYDEVAAINPRLIYA
CCCCCCEEEEEECCCCCCHHHEEEEECCEEEEEECCHHHHHHHHCCCHHHHHCCCEEEEE
GLFGFGQDGPYAAKPAYDDLIQGATALPALNARIGDGTPRYVPNALVDRIVGLTAVGAIC
EECCCCCCCCCCCCCCHHHHHCCCHHCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
AALVHRDRTGQGQRVGVPMFETMAGFVMGDHLGGLTYEPPLDRGGYARHLSPDRRPYQTA
HHHHHCCCCCCCCEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DGYICAMVYNDKQWGSFLRAIGRDDLLSDERYTSFAKRAVNIDVVYAELARIFLTRSTAE
CCEEEEEEECCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHH
WTELLDAADVPAMRMHDLESLLDDPHLVATDFFPVVDHPSEGPIRDMRVSATFAATPVAR
HHHHHHHCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCEEEEEEHHCCHHHH
QRLAPRLGEQGAEVLREAGYSDDEIEALAGCGALKLPAAGKVAS
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA