Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

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The map label for this gene is ycjS [C]

Identifier: 86749187

GI number: 86749187

Start: 2348018

End: 2349094

Strand: Direct

Name: ycjS [C]

Synonym: RPB_2066

Alternate gene names: 86749187

Gene position: 2348018-2349094 (Clockwise)

Preceding gene: 86749186

Following gene: 86749188

Centisome position: 44.04

GC content: 71.59

Gene sequence:

>1077_bases
ATGACGGCGCCGCTGCGGCAGGAACCGCTGCGGCTCGGCCTGTGCGGCTGCGGCTGGGTGATCCGGCATTGCTATCAGCC
GGCGCTGGCGGAGCTTTCGGCGCTGTTCGAGGTCGTGGCGGTCTTCGATCCCGATCCGGCCGCGCTGCAGCGGGCCGCAC
ATGCGTGGCCGGCGGCGCGGCGCTGCGATTCGTTCGAGGAGTTGCTCGCCGCGCATCCGGATGCGGCGGTGATCGCCTCG
CCGAACGCCTGTCATCTCGACCACGCAACCGCATTGCTCGCCGCCGGCATCTCGTGCCTGGTCGAGAAGCCGGTGGTGCG
CGACACGGCCGACGCCGCGCTGCTGCAGGCTGCGGCGCAGAGCGGCGCGGCGCTGGTCAGCGGCGTCGCCTGCCGCTTTC
GCGATGATACACGACTGTGGCTCGATCAGGTCGCGTTGCTCGGTCCGCTCACCGAACTCGATCTGGTCTGGAGTCGCGAG
CACGGCGTGCCGTCGGCGCCGTGGCATCTGCGCCGCGCGGACGGCTGGACCGGCGTGTTCGCCGATCTCGGCTATCATCT
GCTGGACCTCGCCGGCGCGGCGCTGCGCTGGCGCGCCGAACGCATCGACGTCGCCATGGTGCAACGCGCGTCACAGCGTC
GTGGCGCGGGCGCCTCCTGGTATGTCGAGGGCAGCAAGGTCCGTGCCGGGTCGCTGGCCTACGACACCGACGATCGCTTC
GGCGCCACGCTGGCGGTCGACGGCTGCCGGATCGGCCTGCGCGTCGCCTGGATCGACAGCGCGCGCGGCGATCTGGTGCG
GCTCGAGGCGCGCGGTGCGCGGGGCGAAGCCGTGCTCAGCGGGCTGTTCGGATTTTCCGACAACCGCCGTGAGCGCGATC
AGCAAGTGGTGCTGCGGCTGCACGGCCGCGACAAGATCCGTACCACATTCGAAACCGGGCCCGAGTTGCAACTTTGCGCC
TTCGCGACCCTGCTGCGACATTTTCATCGCTGCGTCCGCGCCGGCGCGGACGAGGAAGCCGCCGCGCTGCGGTTCGCCGC
CGCGCTCGGCGGCGCCTTGCGGGAGGCGGCGGCATGA

Upstream 100 bases:

>100_bases
TCACGGATCGCGCCGGCGTTATCGAGGTCGCAACGCCCGGCGAGGTCACCGACCTCGTCGTCGCGCTGGCGCAGGAGGCC
CGCCGGCTGGAGCCGGCGCG

Downstream 100 bases:

>100_bases
GCGCGATCTTCGCCGTCGATCTAGGGGCCACCTGGCTGCGCACCGCGCGGGTCGCGCCGGACGGGCGATGGATCGACCGC
AAGGCGCGGGTGCCGACGCC

Product: oxidoreductase-like

Products: NA

Alternate protein names: Oxidoreductase; Oxidoreductase Domain Protein; Oxidoreductase Protein; Oxidoreductase-Like; Oxidoreductase RifL; Oxidoreductase-Like Protein

Number of amino acids: Translated: 358; Mature: 357

Protein sequence:

>358_residues
MTAPLRQEPLRLGLCGCGWVIRHCYQPALAELSALFEVVAVFDPDPAALQRAAHAWPAARRCDSFEELLAAHPDAAVIAS
PNACHLDHATALLAAGISCLVEKPVVRDTADAALLQAAAQSGAALVSGVACRFRDDTRLWLDQVALLGPLTELDLVWSRE
HGVPSAPWHLRRADGWTGVFADLGYHLLDLAGAALRWRAERIDVAMVQRASQRRGAGASWYVEGSKVRAGSLAYDTDDRF
GATLAVDGCRIGLRVAWIDSARGDLVRLEARGARGEAVLSGLFGFSDNRRERDQQVVLRLHGRDKIRTTFETGPELQLCA
FATLLRHFHRCVRAGADEEAAALRFAAALGGALREAAA

Sequences:

>Translated_358_residues
MTAPLRQEPLRLGLCGCGWVIRHCYQPALAELSALFEVVAVFDPDPAALQRAAHAWPAARRCDSFEELLAAHPDAAVIAS
PNACHLDHATALLAAGISCLVEKPVVRDTADAALLQAAAQSGAALVSGVACRFRDDTRLWLDQVALLGPLTELDLVWSRE
HGVPSAPWHLRRADGWTGVFADLGYHLLDLAGAALRWRAERIDVAMVQRASQRRGAGASWYVEGSKVRAGSLAYDTDDRF
GATLAVDGCRIGLRVAWIDSARGDLVRLEARGARGEAVLSGLFGFSDNRRERDQQVVLRLHGRDKIRTTFETGPELQLCA
FATLLRHFHRCVRAGADEEAAALRFAAALGGALREAAA
>Mature_357_residues
TAPLRQEPLRLGLCGCGWVIRHCYQPALAELSALFEVVAVFDPDPAALQRAAHAWPAARRCDSFEELLAAHPDAAVIASP
NACHLDHATALLAAGISCLVEKPVVRDTADAALLQAAAQSGAALVSGVACRFRDDTRLWLDQVALLGPLTELDLVWSREH
GVPSAPWHLRRADGWTGVFADLGYHLLDLAGAALRWRAERIDVAMVQRASQRRGAGASWYVEGSKVRAGSLAYDTDDRFG
ATLAVDGCRIGLRVAWIDSARGDLVRLEARGARGEAVLSGLFGFSDNRRERDQQVVLRLHGRDKIRTTFETGPELQLCAF
ATLLRHFHRCVRAGADEEAAALRFAAALGGALREAAA

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.-.-.- [C]

Molecular weight: Translated: 38677; Mature: 38546

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAPLRQEPLRLGLCGCGWVIRHCYQPALAELSALFEVVAVFDPDPAALQRAAHAWPAAR
CCCCCCCCCHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHH
RCDSFEELLAAHPDAAVIASPNACHLDHATALLAAGISCLVEKPVVRDTADAALLQAAAQ
HCCHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
SGAALVSGVACRFRDDTRLWLDQVALLGPLTELDLVWSREHGVPSAPWHLRRADGWTGVF
CCHHHHHHHHHEECCCHHHHHHHHHHHCCCHHHHHEEECCCCCCCCCCEEEECCCCCHHH
ADLGYHLLDLAGAALRWRAERIDVAMVQRASQRRGAGASWYVEGSKVRAGSLAYDTDDRF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEECCEEECCCCCC
GATLAVDGCRIGLRVAWIDSARGDLVRLEARGARGEAVLSGLFGFSDNRRERDQQVVLRL
CCEEEECCEEEEEEEEEEECCCCCEEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHEE
HGRDKIRTTFETGPELQLCAFATLLRHFHRCVRAGADEEAAALRFAAALGGALREAAA
CCCCCEEEHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TAPLRQEPLRLGLCGCGWVIRHCYQPALAELSALFEVVAVFDPDPAALQRAAHAWPAAR
CCCCCCCCHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHH
RCDSFEELLAAHPDAAVIASPNACHLDHATALLAAGISCLVEKPVVRDTADAALLQAAAQ
HCCHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
SGAALVSGVACRFRDDTRLWLDQVALLGPLTELDLVWSREHGVPSAPWHLRRADGWTGVF
CCHHHHHHHHHEECCCHHHHHHHHHHHCCCHHHHHEEECCCCCCCCCCEEEECCCCCHHH
ADLGYHLLDLAGAALRWRAERIDVAMVQRASQRRGAGASWYVEGSKVRAGSLAYDTDDRF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEECCEEECCCCCC
GATLAVDGCRIGLRVAWIDSARGDLVRLEARGARGEAVLSGLFGFSDNRRERDQQVVLRL
CCEEEECCEEEEEEEEEEECCCCCEEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHEE
HGRDKIRTTFETGPELQLCAFATLLRHFHRCVRAGADEEAAALRFAAALGGALREAAA
CCCCCEEEHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA