Click here to switch to the map view.

The map label for this gene is 86748993

Identifier: 86748993

GI number: 86748993

Start: 2133845

End: 2134801

Strand: Direct

Name: 86748993

Synonym: RPB_1870

Alternate gene names: NA

Gene position: 2133845-2134801 (Clockwise)

Preceding gene: 86748991

Following gene: 86748994

Centisome position: 40.02

GC content: 68.03

Gene sequence:

>957_bases
ATGTCCGATCGTCTCGCCCGGTTTCGCGGCCGGCTCGAGCTTCCGTTGATCGCGGCGCCGATGTTTCTGGTATCCGGCGT
CGATCTGGTCGCCTCCGCATGTAGCAACGGCGTGATCGGATCATTTCCGACGGTGAATTGCCGTAATACGGAACAACTCG
AAAGCTGGATCGGCACGATCGCGCAGCGGTTGGCGGACCACGAGCAACGGAGCGGCCGTCGCGCGGCGCCGTGGTGCCCG
AACCTGATCGTGCATCGCTCCAATGCGCGGCTCGCCGACGACCTCGCGGTGCTGCTGATGCACAGGCCCGAGATGGTGAT
CACCAGCGTCGGCTCGCCGGAGGCCGTGATCCAGCCGCTGCACGATGTCGGCGCGATGGTGCTGGCGGACGTCGCCAGCA
TTCGCCACGCGGAACGCGCGGCGGCGGCGGGCGCCGACGGGCTGGTGCTGCTGACCGCCGGCGCCGGCGGGCAGACCGGC
TGGCTCAATCCGTTCGCGTTCGTCCGTGCCGTGCGTCGGTTCTTCGACGGCGTGATCGTGCTGGCCGGCGGAATCGGCGA
CGGCGTCGCGCTGCGTGCGGCGATGACGCTCGGCTGCGATCTCGGCTACATGGGCACCAAGTTTATTGCGACGCAAGAGA
GCGCCGCCGACCCACGCAACAAGGCGATGCTGGTCGAGTCCTCTGCCGACGATATCCTGCTGACGACGGCGTTCACCGGC
CTGCAGACCAACATGCTGCGGCCGTCGATCGTGGCTGCCGGACTCGACCCGGACGATCTGCCGGTACGCGGCGCGATCGA
CATCGGCAAGGACATCGACGTCGGCGCGCGCGAGAACCGGCCGCAACGCTGGCGCGATATCTGGAGCGCGGGACATTCGA
CCTCGGGCGTCGGCGGCATCGTGCCGGTCGCGGAGCTGGTCTCGCAAACCGCGCAGGAATTCCGCACTGCAGGATGA

Upstream 100 bases:

>100_bases
GATCTTTGTCATCGGCCATTGCGCGTGCCAATGTTAGGCGACGAACCTAGCACGCCGCTGCGCGGAAGATGCAAACAGAG
CAGGAGGAACTGCCGTGGAA

Downstream 100 bases:

>100_bases
GCGCATTGTCGCGCCAGTCGACGGCTGTGCTGCGCCATGTCATATCTAGACGATAAGAAAAATCGGGGAGACCACGCCAT
GAAGAGCTTTCGCGTCTCGG

Product: 2-nitropropane dioxygenase, NPD

Products: NA

Alternate protein names: 2-Nitropropane Dioxygenase; 2-Nitropropane Dioxygenase Family Protein; Oxidoreductase 2-Nitropropane Dioxygenase Family; Dioxygenase; Oxidoreductase; 2-Nitropropane Dioxygenase Family; 2-Nitropropane Dioxygenase Npd; Dioxygenases Related 2-Nitropropane Dioxygenase; 2-Nitropropane Dioxygenase Family Oxidoreductase; 2-Nitropropane Dioxygenase-Like Dioxygenase; Dioxygenase Protein; Transmembrane Protein; 2-Nitropropane Dioxygenase Protein; Dioxygenase Oxidoreductase -Nitropropane Dioxygenase Npd

Number of amino acids: Translated: 318; Mature: 317

Protein sequence:

>318_residues
MSDRLARFRGRLELPLIAAPMFLVSGVDLVASACSNGVIGSFPTVNCRNTEQLESWIGTIAQRLADHEQRSGRRAAPWCP
NLIVHRSNARLADDLAVLLMHRPEMVITSVGSPEAVIQPLHDVGAMVLADVASIRHAERAAAAGADGLVLLTAGAGGQTG
WLNPFAFVRAVRRFFDGVIVLAGGIGDGVALRAAMTLGCDLGYMGTKFIATQESAADPRNKAMLVESSADDILLTTAFTG
LQTNMLRPSIVAAGLDPDDLPVRGAIDIGKDIDVGARENRPQRWRDIWSAGHSTSGVGGIVPVAELVSQTAQEFRTAG

Sequences:

>Translated_318_residues
MSDRLARFRGRLELPLIAAPMFLVSGVDLVASACSNGVIGSFPTVNCRNTEQLESWIGTIAQRLADHEQRSGRRAAPWCP
NLIVHRSNARLADDLAVLLMHRPEMVITSVGSPEAVIQPLHDVGAMVLADVASIRHAERAAAAGADGLVLLTAGAGGQTG
WLNPFAFVRAVRRFFDGVIVLAGGIGDGVALRAAMTLGCDLGYMGTKFIATQESAADPRNKAMLVESSADDILLTTAFTG
LQTNMLRPSIVAAGLDPDDLPVRGAIDIGKDIDVGARENRPQRWRDIWSAGHSTSGVGGIVPVAELVSQTAQEFRTAG
>Mature_317_residues
SDRLARFRGRLELPLIAAPMFLVSGVDLVASACSNGVIGSFPTVNCRNTEQLESWIGTIAQRLADHEQRSGRRAAPWCPN
LIVHRSNARLADDLAVLLMHRPEMVITSVGSPEAVIQPLHDVGAMVLADVASIRHAERAAAAGADGLVLLTAGAGGQTGW
LNPFAFVRAVRRFFDGVIVLAGGIGDGVALRAAMTLGCDLGYMGTKFIATQESAADPRNKAMLVESSADDILLTTAFTGL
QTNMLRPSIVAAGLDPDDLPVRGAIDIGKDIDVGARENRPQRWRDIWSAGHSTSGVGGIVPVAELVSQTAQEFRTAG

Specific function: Unknown

COG id: COG2070

COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33624; Mature: 33493

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDRLARFRGRLELPLIAAPMFLVSGVDLVASACSNGVIGSFPTVNCRNTEQLESWIGTI
CCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH
AQRLADHEQRSGRRAAPWCPNLIVHRSNARLADDLAVLLMHRPEMVITSVGSPEAVIQPL
HHHHHHHHHHCCCCCCCCCCCCEEECCCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHH
HDVGAMVLADVASIRHAERAAAAGADGLVLLTAGAGGQTGWLNPFAFVRAVRRFFDGVIV
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCEEE
LAGGIGDGVALRAAMTLGCDLGYMGTKFIATQESAADPRNKAMLVESSADDILLTTAFTG
EECCCCCHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCEEEEECCCCCEEEEEEHHH
LQTNMLRPSIVAAGLDPDDLPVRGAIDIGKDIDVGARENRPQRWRDIWSAGHSTSGVGGI
HHHCCCCCHHEECCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCH
VPVAELVSQTAQEFRTAG
HHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SDRLARFRGRLELPLIAAPMFLVSGVDLVASACSNGVIGSFPTVNCRNTEQLESWIGTI
CCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH
AQRLADHEQRSGRRAAPWCPNLIVHRSNARLADDLAVLLMHRPEMVITSVGSPEAVIQPL
HHHHHHHHHHCCCCCCCCCCCCEEECCCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHH
HDVGAMVLADVASIRHAERAAAAGADGLVLLTAGAGGQTGWLNPFAFVRAVRRFFDGVIV
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCEEE
LAGGIGDGVALRAAMTLGCDLGYMGTKFIATQESAADPRNKAMLVESSADDILLTTAFTG
EECCCCCHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCEEEEECCCCCEEEEEEHHH
LQTNMLRPSIVAAGLDPDDLPVRGAIDIGKDIDVGARENRPQRWRDIWSAGHSTSGVGGI
HHHCCCCCHHEECCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCH
VPVAELVSQTAQEFRTAG
HHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA