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The map label for this gene is ureF

Identifier: 86748991

GI number: 86748991

Start: 2131316

End: 2132029

Strand: Direct

Name: ureF

Synonym: RPB_1868

Alternate gene names: 86748991

Gene position: 2131316-2132029 (Clockwise)

Preceding gene: 86748990

Following gene: 86748993

Centisome position: 39.97

GC content: 72.27

Gene sequence:

>714_bases
ATGCCGGAGGCGACCGCCGGGCCGCTGTCGGCGGAGCAGGGCGCGTCGCTGTATCGGCTGATGACCTGGCTGTCGCCGGC
GTTTCCGGTCGGTGCGTTTTCCTATTCCAGCGGCCTCGAATGGGCGGTCGAGGCCGGCGACGTCGCCGACGCGGCGTCCT
TGCGCGACTGGCTCGGCGCGATGCTCGAACACGGCGCCGGCTTTTGCGACGGTGTCTTCCTCGCGCAGGCCTATCGTGCG
GTCGAGGCCGGCGACGACGCGGCGCTGCGCGACGTCGCCGAACTTGCGGCCGCGATGGTGCCCTCGGCCGAGCGCCATCT
CGAAACCACGGCGCAGGGCAAGGCTTTCATCGAGATCGTGCGTCACGCCTGGGCCAGCGACGGCCTCGCCCGCGCGGTGG
GCGCCTGCAACGGCGCGCTGGCCTATCCGGTCGCGGTCGGCCTCGTCAGCGCGACGCATCGCGTGCCGTTGGCCGCGACG
CTGCACGCGTTTCTGCATGCGGTGGTCTCGAACTGGATTTCCGCCGGCGCGCGGCTGGTGCCGCTCGGCCAGACCGACAG
CCAGCGCCTGCTGGCCGCGCTCGAACCCGCCGTGATCGCCACCGGCGACCGCGCGTTGCGCGCCTCGCTCGACGATCTCG
GTGGCGCCACCTTCCGCGCCGACCTCGCCAGTCTGCGCCACGAGACGCAGTACACGCGGCTGTTCAGGTCGTAG

Upstream 100 bases:

>100_bases
CATGCCGGGCATGATCACGCCCACGATCACCACGTCCATGACGAGCATTGCGGCCACGATCACGGGCACGGCCATTCCCA
CAAGCATGACCACAAGTAAC

Downstream 100 bases:

>100_bases
CGGCTTCGATGTGCCTTACGCCCGTCATTCCGGGGCGCTTGCGAAGCAAGCGAACCCGGAATCTCGAATTGTTTGCGTGT
CCGATTCCGGGTTCGCGCCT

Product: urease accessory protein UreF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 236

Protein sequence:

>237_residues
MPEATAGPLSAEQGASLYRLMTWLSPAFPVGAFSYSSGLEWAVEAGDVADAASLRDWLGAMLEHGAGFCDGVFLAQAYRA
VEAGDDAALRDVAELAAAMVPSAERHLETTAQGKAFIEIVRHAWASDGLARAVGACNGALAYPVAVGLVSATHRVPLAAT
LHAFLHAVVSNWISAGARLVPLGQTDSQRLLAALEPAVIATGDRALRASLDDLGGATFRADLASLRHETQYTRLFRS

Sequences:

>Translated_237_residues
MPEATAGPLSAEQGASLYRLMTWLSPAFPVGAFSYSSGLEWAVEAGDVADAASLRDWLGAMLEHGAGFCDGVFLAQAYRA
VEAGDDAALRDVAELAAAMVPSAERHLETTAQGKAFIEIVRHAWASDGLARAVGACNGALAYPVAVGLVSATHRVPLAAT
LHAFLHAVVSNWISAGARLVPLGQTDSQRLLAALEPAVIATGDRALRASLDDLGGATFRADLASLRHETQYTRLFRS
>Mature_236_residues
PEATAGPLSAEQGASLYRLMTWLSPAFPVGAFSYSSGLEWAVEAGDVADAASLRDWLGAMLEHGAGFCDGVFLAQAYRAV
EAGDDAALRDVAELAAAMVPSAERHLETTAQGKAFIEIVRHAWASDGLARAVGACNGALAYPVAVGLVSATHRVPLAATL
HAFLHAVVSNWISAGARLVPLGQTDSQRLLAALEPAVIATGDRALRASLDDLGGATFRADLASLRHETQYTRLFRS

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter

COG id: COG0830

COG function: function code O; Urease accessory protein UreF

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureF family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): UREF_RHOP2 (Q2IYY4)

Other databases:

- EMBL:   CP000250
- RefSeq:   YP_485487.1
- STRING:   Q2IYY4
- GeneID:   3908063
- GenomeReviews:   CP000250_GR
- KEGG:   rpb:RPB_1868
- eggNOG:   COG0830
- HOGENOM:   HBG709295
- OMA:   WLSPAFP
- ProtClustDB:   CLSK818588
- BioCyc:   RPAL316058:RPB_1868-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01385
- InterPro:   IPR002639
- PIRSF:   PIRSF009467

Pfam domain/function: PF01730 UreF

EC number: NA

Molecular weight: Translated: 24797; Mature: 24666

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEATAGPLSAEQGASLYRLMTWLSPAFPVGAFSYSSGLEWAVEAGDVADAASLRDWLGA
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHH
MLEHGAGFCDGVFLAQAYRAVEAGDDAALRDVAELAAAMVPSAERHLETTAQGKAFIEIV
HHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
RHAWASDGLARAVGACNGALAYPVAVGLVSATHRVPLAATLHAFLHAVVSNWISAGARLV
HHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEE
PLGQTDSQRLLAALEPAVIATGDRALRASLDDLGGATFRADLASLRHETQYTRLFRS
ECCCCCHHHHHHHHCCHHEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PEATAGPLSAEQGASLYRLMTWLSPAFPVGAFSYSSGLEWAVEAGDVADAASLRDWLGA
CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHH
MLEHGAGFCDGVFLAQAYRAVEAGDDAALRDVAELAAAMVPSAERHLETTAQGKAFIEIV
HHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
RHAWASDGLARAVGACNGALAYPVAVGLVSATHRVPLAATLHAFLHAVVSNWISAGARLV
HHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEE
PLGQTDSQRLLAALEPAVIATGDRALRASLDDLGGATFRADLASLRHETQYTRLFRS
ECCCCCHHHHHHHHCCHHEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA