| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is ureE
Identifier: 86748990
GI number: 86748990
Start: 2130667
End: 2131314
Strand: Direct
Name: ureE
Synonym: RPB_1867
Alternate gene names: 86748990
Gene position: 2130667-2131314 (Clockwise)
Preceding gene: 86748989
Following gene: 86748991
Centisome position: 39.96
GC content: 65.9
Gene sequence:
>648_bases ATGATCCGAGCGAGCAAGGTCCACGGGCAATATCACTGGAAGGAGCCGGCGGCCGACACCGTGGTGCTCGATTTCGACGA CCGGCATCGCCGCCGCATGGCGATGACCGGCACCCGCGGATTGTCGTTCCTGCTCGATCTCGAACACGCCACGGCGTTGC GCGGCGGCGACGCGCTGGTGCTCGACGACGGCCGGCTGATCGAAGTGGTCGCGGCGCCGGAGCCGTTGCTGGAAATCCGC GGCCGCGATCCGCAACACCTGGTGCGGCTCGCCTGGCACCTCGGCAACCGCCATCTGCCGACCCAGATCATGGCCAAGGC GCTGCGCATCCGCCGCGATCACGTCATCGCCGACATGGTCAGGGGGCTCGGCGGCAAGGCGGTCGAGATCGAGGCGCCGT TCGATCCCGAAGGCGGCGCCTATGCGCCGGCGCACGAGGGCGCCGCGCATCATGATCATGGCGGCCATGAGCATCGGCAC CATGACCATGGTCATCATGACCACGCCGATCATGAGCACGATCACAAGCACGATCACGGCAAACACGATCATGCCGGGCA TGATCACGCCCACGATCACCACGTCCATGACGAGCATTGCGGCCACGATCACGGGCACGGCCATTCCCACAAGCATGACC ACAAGTAA
Upstream 100 bases:
>100_bases CCGCTGAAGGCCGCGCCGACGGTGATCGAGATCATCAGCGACGGCAAGGTCGAGACATTCTAGGCGCGTCGTCCCGCGCC GAAAGCCGAAGAGTATCGTC
Downstream 100 bases:
>100_bases CATGCCGGAGGCGACCGCCGGGCCGCTGTCGGCGGAGCAGGGCGCGTCGCTGTATCGGCTGATGACCTGGCTGTCGCCGG CGTTTCCGGTCGGTGCGTTT
Product: UreE urease accessory-like
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MIRASKVHGQYHWKEPAADTVVLDFDDRHRRRMAMTGTRGLSFLLDLEHATALRGGDALVLDDGRLIEVVAAPEPLLEIR GRDPQHLVRLAWHLGNRHLPTQIMAKALRIRRDHVIADMVRGLGGKAVEIEAPFDPEGGAYAPAHEGAAHHDHGGHEHRH HDHGHHDHADHEHDHKHDHGKHDHAGHDHAHDHHVHDEHCGHDHGHGHSHKHDHK
Sequences:
>Translated_215_residues MIRASKVHGQYHWKEPAADTVVLDFDDRHRRRMAMTGTRGLSFLLDLEHATALRGGDALVLDDGRLIEVVAAPEPLLEIR GRDPQHLVRLAWHLGNRHLPTQIMAKALRIRRDHVIADMVRGLGGKAVEIEAPFDPEGGAYAPAHEGAAHHDHGGHEHRH HDHGHHDHADHEHDHKHDHGKHDHAGHDHAHDHHVHDEHCGHDHGHGHSHKHDHK >Mature_215_residues MIRASKVHGQYHWKEPAADTVVLDFDDRHRRRMAMTGTRGLSFLLDLEHATALRGGDALVLDDGRLIEVVAAPEPLLEIR GRDPQHLVRLAWHLGNRHLPTQIMAKALRIRRDHVIADMVRGLGGKAVEIEAPFDPEGGAYAPAHEGAAHHDHGGHEHRH HDHGHHDHADHEHDHKHDHGKHDHAGHDHAHDHHVHDEHCGHDHGHGHSHKHDHK
Specific function: Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
COG id: COG2371
COG function: function code O; Urease accessory protein UreE
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ureE family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): UREE_RHOP2 (Q2IYY5)
Other databases:
- EMBL: CP000250 - RefSeq: YP_485486.1 - ProteinModelPortal: Q2IYY5 - SMR: Q2IYY5 - STRING: Q2IYY5 - GeneID: 3908062 - GenomeReviews: CP000250_GR - KEGG: rpb:RPB_1867 - eggNOG: COG2371 - HOGENOM: HBG635302 - OMA: DARCKSR - ProtClustDB: CLSK844660 - BioCyc: RPAL316058:RPB_1867-MONOMER - GO: GO:0005737 - HAMAP: MF_00822 - InterPro: IPR012406 - InterPro: IPR007864 - InterPro: IPR004029 - Gene3D: G3DSA:3.30.70.790 - PIRSF: PIRSF036402
Pfam domain/function: PF05194 UreE_C; PF02814 UreE_N; SSF69737 UreE_C; SSF69287 UreE_N
EC number: NA
Molecular weight: Translated: 24271; Mature: 24271
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRASKVHGQYHWKEPAADTVVLDFDDRHRRRMAMTGTRGLSFLLDLEHATALRGGDALV CCCCCCCCCEEECCCCCCCEEEEECCCHHHHHHHHCCCCCEEEEEEHHHHHHCCCCCEEE LDDGRLIEVVAAPEPLLEIRGRDPQHLVRLAWHLGNRHLPTQIMAKALRIRRDHVIADMV EECCCEEEEEECCCHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH RGLGGKAVEIEAPFDPEGGAYAPAHEGAAHHDHGGHEHRHHDHGHHDHADHEHDHKHDHG HCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC KHDHAGHDHAHDHHVHDEHCGHDHGHGHSHKHDHK CCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MIRASKVHGQYHWKEPAADTVVLDFDDRHRRRMAMTGTRGLSFLLDLEHATALRGGDALV CCCCCCCCCEEECCCCCCCEEEEECCCHHHHHHHHCCCCCEEEEEEHHHHHHCCCCCEEE LDDGRLIEVVAAPEPLLEIRGRDPQHLVRLAWHLGNRHLPTQIMAKALRIRRDHVIADMV EECCCEEEEEECCCHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH RGLGGKAVEIEAPFDPEGGAYAPAHEGAAHHDHGGHEHRHHDHGHHDHADHEHDHKHDHG HCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC KHDHAGHDHAHDHHVHDEHCGHDHGHGHSHKHDHK CCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA