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The map label for this gene is 86748949

Identifier: 86748949

GI number: 86748949

Start: 2087832

End: 2088584

Strand: Direct

Name: 86748949

Synonym: RPB_1826

Alternate gene names: NA

Gene position: 2087832-2088584 (Clockwise)

Preceding gene: 86748948

Following gene: 86748950

Centisome position: 39.16

GC content: 69.06

Gene sequence:

>753_bases
ATGTCCCAAGATCTTGATGAGCGGCCACTTTCCGATCCCGTCCGGAGTCGGAACGCTCGATCCCGAGACGAGTGCATCAT
GGTGTATCGGCGGACCAATCAGGTCGTAAAGCGGCTGGCTGCACGCCGCAGCGCCATCCTTGCTGCGGCGCGCGAGACCG
CGGTCGAAGGTGGCATGGCTGCGGTGCAGATTGCCCCCGTGGCGAGCCGCGCGAACGTCGCTGCGGGAACCGTGTACCGT
TACTTCCCGTCCAAGGCCGACCTGATTTCCGAACTGATCGCAGACGTGTCGCGCGACGAACTCGCCGCGATTCGCCGCGC
CGCAGATGCTGCGCCGGGCCCGTCCTCCGCGCTCGCCGCTGCGGTGACCACGGTCGCGGTGCATGTGCTGTCGCATCGCA
AGCTCGCCTGGGGCATTCTCGCCGAGCCGGTCGATGTCGACGTCTCAGCGTCGCGGCTCGCCAGCCGCCGGGATATCGCC
GGCGAGATGGAATCGCGGATCGACGCCGCGGTGCGCGCCGGCCATTTGCCCGCGCAGGACACGGCGCTCGCAGCGACCGC
GTTGCTTGGTGCGGTGCATGAATCCCTGGTCGGGCCGCTGGCCCCCGACAATCTCGACGACCCGGCCAAATTGCGCGATG
CGGTGCAAACCGTGACGCTGCTGGCGCTGCGCGCCGTCGGCGTGATGGACGCGCGGGCCCGCGGGCTTGTGGTGCAGGCC
GTGGTGCCGTCCCGCATTCTGGTCGGCGCCTGA

Upstream 100 bases:

>100_bases
CACTTCATTGCGGTAAGTGCCAGGCTGTAAGGGCTTGCCTTCGTCTCTGAATAGGTGTTCACTTTTTTCACTGATTTGGG
CACGGCGTTTCGCTACGCCG

Downstream 100 bases:

>100_bases
GACTTTCTGACGGCCGAATCCGTTTGCCGAATGGAATTGCTCTCAGTAAGGGTTGAGGGCGTACCCCGATCCCGGCCTGT
TGCGCTGTTGCGGCAGACGC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MSQDLDERPLSDPVRSRNARSRDECIMVYRRTNQVVKRLAARRSAILAAARETAVEGGMAAVQIAPVASRANVAAGTVYR
YFPSKADLISELIADVSRDELAAIRRAADAAPGPSSALAAAVTTVAVHVLSHRKLAWGILAEPVDVDVSASRLASRRDIA
GEMESRIDAAVRAGHLPAQDTALAATALLGAVHESLVGPLAPDNLDDPAKLRDAVQTVTLLALRAVGVMDARARGLVVQA
VVPSRILVGA

Sequences:

>Translated_250_residues
MSQDLDERPLSDPVRSRNARSRDECIMVYRRTNQVVKRLAARRSAILAAARETAVEGGMAAVQIAPVASRANVAAGTVYR
YFPSKADLISELIADVSRDELAAIRRAADAAPGPSSALAAAVTTVAVHVLSHRKLAWGILAEPVDVDVSASRLASRRDIA
GEMESRIDAAVRAGHLPAQDTALAATALLGAVHESLVGPLAPDNLDDPAKLRDAVQTVTLLALRAVGVMDARARGLVVQA
VVPSRILVGA
>Mature_249_residues
SQDLDERPLSDPVRSRNARSRDECIMVYRRTNQVVKRLAARRSAILAAARETAVEGGMAAVQIAPVASRANVAAGTVYRY
FPSKADLISELIADVSRDELAAIRRAADAAPGPSSALAAAVTTVAVHVLSHRKLAWGILAEPVDVDVSASRLASRRDIAG
EMESRIDAAVRAGHLPAQDTALAATALLGAVHESLVGPLAPDNLDDPAKLRDAVQTVTLLALRAVGVMDARARGLVVQAV
VPSRILVGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26254; Mature: 26123

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQDLDERPLSDPVRSRNARSRDECIMVYRRTNQVVKRLAARRSAILAAARETAVEGGMA
CCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
AVQIAPVASRANVAAGTVYRYFPSKADLISELIADVSRDELAAIRRAADAAPGPSSALAA
EEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHH
AVTTVAVHVLSHRKLAWGILAEPVDVDVSASRLASRRDIAGEMESRIDAAVRAGHLPAQD
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
TALAATALLGAVHESLVGPLAPDNLDDPAKLRDAVQTVTLLALRAVGVMDARARGLVVQA
HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE
VVPSRILVGA
ECCCHHHCCC
>Mature Secondary Structure 
SQDLDERPLSDPVRSRNARSRDECIMVYRRTNQVVKRLAARRSAILAAARETAVEGGMA
CCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
AVQIAPVASRANVAAGTVYRYFPSKADLISELIADVSRDELAAIRRAADAAPGPSSALAA
EEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHH
AVTTVAVHVLSHRKLAWGILAEPVDVDVSASRLASRRDIAGEMESRIDAAVRAGHLPAQD
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
TALAATALLGAVHESLVGPLAPDNLDDPAKLRDAVQTVTLLALRAVGVMDARARGLVVQA
HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE
VVPSRILVGA
ECCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA