| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86748948
Identifier: 86748948
GI number: 86748948
Start: 2087399
End: 2087716
Strand: Direct
Name: 86748948
Synonym: RPB_1825
Alternate gene names: NA
Gene position: 2087399-2087716 (Clockwise)
Preceding gene: 86748947
Following gene: 86748949
Centisome position: 39.15
GC content: 67.61
Gene sequence:
>318_bases ATGAGCGAGGTCTTGCGCAGCGACGTGATGATGGCGTTCGCCGTGATGACGGCGGTCACGGTCGCTTCCCGGCTCGGTGG CTTCTGGCTGATGCGCTATGTCGACGTCACGCCGCGGGTGCGGCGGATGCTCGACGCGCTGCCCGGTTCGATCATCGTCG CGGCCGCGCTGCCGGTCGCGGTCAATGGTGGGCCGATCGTGATGTTCGCGCTCGCCGCTGCGATGGCGGTCAGCATTGTC CGCCGCAACGACTTCATCGCGGTGATCACCGGTATGACCGTAGCGGCTTTAGCGCGGGCGCTCGGGTTGGGCGGCTAG
Upstream 100 bases:
>100_bases GGCTGGTTCCAGGCTACTGGTTTATCATCGCCGGCGCACTTTGCGGCGCGCTGAGCGCCGCGCTAATGGACGAGCCGCCG CCACGGCCCGAGCGCGCGGC
Downstream 100 bases:
>100_bases TTGCAGTTTGCTGTTCACTTCATTGCGGTAAGTGCCAGGCTGTAAGGGCTTGCCTTCGTCTCTGAATAGGTGTTCACTTT TTTCACTGATTTGGGCACGG
Product: branched chain amino acid ABC transporter
Products: NA
Alternate protein names: Branched Chain Amino Acid ABC Transporter
Number of amino acids: Translated: 105; Mature: 104
Protein sequence:
>105_residues MSEVLRSDVMMAFAVMTAVTVASRLGGFWLMRYVDVTPRVRRMLDALPGSIIVAAALPVAVNGGPIVMFALAAAMAVSIV RRNDFIAVITGMTVAALARALGLGG
Sequences:
>Translated_105_residues MSEVLRSDVMMAFAVMTAVTVASRLGGFWLMRYVDVTPRVRRMLDALPGSIIVAAALPVAVNGGPIVMFALAAAMAVSIV RRNDFIAVITGMTVAALARALGLGG >Mature_104_residues SEVLRSDVMMAFAVMTAVTVASRLGGFWLMRYVDVTPRVRRMLDALPGSIIVAAALPVAVNGGPIVMFALAAAMAVSIVR RNDFIAVITGMTVAALARALGLGG
Specific function: Unknown
COG id: COG4541
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10950; Mature: 10819
Theoretical pI: Translated: 11.96; Mature: 11.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 8.6 %Met (Translated Protein) 8.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 7.7 %Met (Mature Protein) 7.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEVLRSDVMMAFAVMTAVTVASRLGGFWLMRYVDVTPRVRRMLDALPGSIIVAAALPVA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHCEE VNGGPIVMFALAAAMAVSIVRRNDFIAVITGMTVAALARALGLGG ECCCHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SEVLRSDVMMAFAVMTAVTVASRLGGFWLMRYVDVTPRVRRMLDALPGSIIVAAALPVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHCEE VNGGPIVMFALAAAMAVSIVRRNDFIAVITGMTVAALARALGLGG ECCCHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA